| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is bglX [H]
Identifier: 146299324
GI number: 146299324
Start: 1815530
End: 1817797
Strand: Direct
Name: bglX [H]
Synonym: Fjoh_1564
Alternate gene names: 146299324
Gene position: 1815530-1817797 (Clockwise)
Preceding gene: 146299323
Following gene: 146299325
Centisome position: 29.78
GC content: 34.26
Gene sequence:
>2268_bases ATGAAAAACAGTATTTTTTGTGCGCTTATGTTCCTTTTTTGCGGAGCAGTCTGGAGCCAGCAGGTTAAAAATAATAAAGC AGAAATTGATGCTAAAGTTTCTGAATTATTATCAAAAATGACGCTTGAAGAAAAAGTGGGACAAATGACCCAAATTACAG TAACAATTTTTGAAGATGCTAAAAAACCGGGATATTTTGATGCTGCAAAATTAAAGCAGGGAATTCAGGATTATCATATT GGTTCTATATTAAATGTACCCAATCCGGGAGCTCCAACTTTAAAAAGATGGCAGGAAACTATGCAGGCCATTACAATTGA GGCAAATAAAACAAGGCTAAAAATTCCTGTGCTATACGGTATCGATGCTATTCACGGAGCAAGTTATACAGCTGGTGCAA CATTATTTCCTCAGCAAATAGGTTTGGCAGCAACTTTTAATACCGATTTAGTAAAACGAGGAGCAGCTATTTCAGCTTAT GAAACAAGAGCTTCTTCAATTCCGTGGGTTTTCTCGCCAGATTTAGATTTTCCAAGAAATCCAGCCTGGTCAAGAATGTG GGAATCATTTGGAGAAGACGCCTATTTATCATCAAAAATGGCAGTAGCTTTAGTTGATGGATTTGAAGGAAATAACAATG TAGGTTCTAAATACAGCGTAGCTTCCTGCATGAAACATTACATAGGCTACGGAAGCACTACGACAGGAAAAGACAGAACA CCAAGCATTATTCCGGAAAGACTTTTAAGACAATATGACTTAACGATTTATCAGGCAGCTATTAATGCAGGTGCAAAAAG CGTAATGGTAAGCTCAGGAGAAATCAACGGAACTCCAGTTCATGCAAGCAAACACTTAATTACTGATATCCTTAAAAAAG AATTAGGTTTCTCTGGCGTTGTCGTTACTGACTGGAAAGATATCATTTATCTGTACACAAGACACAAAGTTGCCGAATCG AAACGTGATGCTGTTCGAATTGCTGTTATGGCCGGAATCGATATGAGTATGGTTCCTGAAGAATTTTCTTTTTATACTGA TTTATTAGATTTAGTTAAAAAAGGAGAAGTACCAGTATCAAGAATCGATGATGCCGTTTCGAGAATCTTAAAAATGAAAT TTGAACTGAATTTGTTTCAAAATACGGTAGCAGATTTAAAAGATTATCCAAAATTTGGATCAGCAGAGCATATCGAAGAA GCTTATAATACTGCCGCAGAATCGATTACTTTATTAAAAAACAACGCATCAGTTCTGCCATTAAGTAAAAACGAAAAAGT TTTGGTTACAGGTGCAACTGCCAATAGTATGAAATACCTTAACGGAGGCTGGTCATATACCTGGCAGGGCGAAAACTCAG ATACTTATGCAGCTGATAAATTCACCATTTTAGAAGCTTTTCAAAATAAATTAGGTAAAGAAAATGTATTATATACAGCT GGTGCAGATCTTGAAAAAGAAGACGATGCAGAAATTCAGAAAGCAGTAGAATTGGCAAAAAACGCTTCTAAAATCGTTTT ATGCTTAGGAGAAAAAAACTATACAGAAACTCCGGGCGATATCAGCGATCTTTATATGAGTGCTTCTCAAATAAAACTAG CTTTAGCTTTAGCAAAAGTAAATAAGCCGATTATTTTAGTTTTAAATGAAGGAAGACCAAGATTAATAAGCAATTTTGAA GACAAAATGAGCGCTGTTGTTCAATGTTATCTTCCGGGAAATGAAGGAGCAAGAGCCTTAGTTGATATTTTATACGGAGA CGTAAATCCAAGTGGAAGACTGCCTTATAATTATCCTAGATATCCCAACTCTTTAGAAAAATACAATAGAAAATATACAG AAAGTATTTCTGAAGGAGAACAGAATAATGACGCCAAATACGAGAAAAGTTATTCTCCTCAGTTTGAATTTGGAACCGGA TTATCGTATACCACTTTTGTTTATTCAAATCTAAAAATTGATAAAACAGAAATCAATAATACAGATGAAGTAAATGTTTC GGTAGATGTTACAAATTCAGGAACGAGAGCAGGAAAAGAATCCGTTTTATTGTATTTGTCTGATAACGTTGCAAGTATTA CACCTGAATTTAAATCTTTAAAAAGATTTGAAAAGATAAGTTTAAAACCAAATGAAACTCAAACAGTAAAATTCACTTTA AAACAAAAAGATCTTCAATTTGTAAACGAAGATTTAAAATGGATTTCTGAAAAAGGATCTTTTACTGTTCAGATAGGAGA TCAAAAAAAAGATTTTCTGTTGAAATAA
Upstream 100 bases:
>100_bases AACAATTAATTCTCAAAAATATACCATTACCATACCGGCACATGCAATGCAGACACTGGTATACTAAGACATTATTTGAT ATTAATATTAAAAGTATAAA
Downstream 100 bases:
>100_bases ATTACTAAACCTGTAAAGTCTTATGGTTTTACAGGTTTAAACAAAATAGCAAAAATTATAGTTATGATATATTTGATACT AATGATAGTAACAACTTTAA
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 755; Mature: 755
Protein sequence:
>755_residues MKNSIFCALMFLFCGAVWSQQVKNNKAEIDAKVSELLSKMTLEEKVGQMTQITVTIFEDAKKPGYFDAAKLKQGIQDYHI GSILNVPNPGAPTLKRWQETMQAITIEANKTRLKIPVLYGIDAIHGASYTAGATLFPQQIGLAATFNTDLVKRGAAISAY ETRASSIPWVFSPDLDFPRNPAWSRMWESFGEDAYLSSKMAVALVDGFEGNNNVGSKYSVASCMKHYIGYGSTTTGKDRT PSIIPERLLRQYDLTIYQAAINAGAKSVMVSSGEINGTPVHASKHLITDILKKELGFSGVVVTDWKDIIYLYTRHKVAES KRDAVRIAVMAGIDMSMVPEEFSFYTDLLDLVKKGEVPVSRIDDAVSRILKMKFELNLFQNTVADLKDYPKFGSAEHIEE AYNTAAESITLLKNNASVLPLSKNEKVLVTGATANSMKYLNGGWSYTWQGENSDTYAADKFTILEAFQNKLGKENVLYTA GADLEKEDDAEIQKAVELAKNASKIVLCLGEKNYTETPGDISDLYMSASQIKLALALAKVNKPIILVLNEGRPRLISNFE DKMSAVVQCYLPGNEGARALVDILYGDVNPSGRLPYNYPRYPNSLEKYNRKYTESISEGEQNNDAKYEKSYSPQFEFGTG LSYTTFVYSNLKIDKTEINNTDEVNVSVDVTNSGTRAGKESVLLYLSDNVASITPEFKSLKRFEKISLKPNETQTVKFTL KQKDLQFVNEDLKWISEKGSFTVQIGDQKKDFLLK
Sequences:
>Translated_755_residues MKNSIFCALMFLFCGAVWSQQVKNNKAEIDAKVSELLSKMTLEEKVGQMTQITVTIFEDAKKPGYFDAAKLKQGIQDYHI GSILNVPNPGAPTLKRWQETMQAITIEANKTRLKIPVLYGIDAIHGASYTAGATLFPQQIGLAATFNTDLVKRGAAISAY ETRASSIPWVFSPDLDFPRNPAWSRMWESFGEDAYLSSKMAVALVDGFEGNNNVGSKYSVASCMKHYIGYGSTTTGKDRT PSIIPERLLRQYDLTIYQAAINAGAKSVMVSSGEINGTPVHASKHLITDILKKELGFSGVVVTDWKDIIYLYTRHKVAES KRDAVRIAVMAGIDMSMVPEEFSFYTDLLDLVKKGEVPVSRIDDAVSRILKMKFELNLFQNTVADLKDYPKFGSAEHIEE AYNTAAESITLLKNNASVLPLSKNEKVLVTGATANSMKYLNGGWSYTWQGENSDTYAADKFTILEAFQNKLGKENVLYTA GADLEKEDDAEIQKAVELAKNASKIVLCLGEKNYTETPGDISDLYMSASQIKLALALAKVNKPIILVLNEGRPRLISNFE DKMSAVVQCYLPGNEGARALVDILYGDVNPSGRLPYNYPRYPNSLEKYNRKYTESISEGEQNNDAKYEKSYSPQFEFGTG LSYTTFVYSNLKIDKTEINNTDEVNVSVDVTNSGTRAGKESVLLYLSDNVASITPEFKSLKRFEKISLKPNETQTVKFTL KQKDLQFVNEDLKWISEKGSFTVQIGDQKKDFLLK >Mature_755_residues MKNSIFCALMFLFCGAVWSQQVKNNKAEIDAKVSELLSKMTLEEKVGQMTQITVTIFEDAKKPGYFDAAKLKQGIQDYHI GSILNVPNPGAPTLKRWQETMQAITIEANKTRLKIPVLYGIDAIHGASYTAGATLFPQQIGLAATFNTDLVKRGAAISAY ETRASSIPWVFSPDLDFPRNPAWSRMWESFGEDAYLSSKMAVALVDGFEGNNNVGSKYSVASCMKHYIGYGSTTTGKDRT PSIIPERLLRQYDLTIYQAAINAGAKSVMVSSGEINGTPVHASKHLITDILKKELGFSGVVVTDWKDIIYLYTRHKVAES KRDAVRIAVMAGIDMSMVPEEFSFYTDLLDLVKKGEVPVSRIDDAVSRILKMKFELNLFQNTVADLKDYPKFGSAEHIEE AYNTAAESITLLKNNASVLPLSKNEKVLVTGATANSMKYLNGGWSYTWQGENSDTYAADKFTILEAFQNKLGKENVLYTA GADLEKEDDAEIQKAVELAKNASKIVLCLGEKNYTETPGDISDLYMSASQIKLALALAKVNKPIILVLNEGRPRLISNFE DKMSAVVQCYLPGNEGARALVDILYGDVNPSGRLPYNYPRYPNSLEKYNRKYTESISEGEQNNDAKYEKSYSPQFEFGTG LSYTTFVYSNLKIDKTEINNTDEVNVSVDVTNSGTRAGKESVLLYLSDNVASITPEFKSLKRFEKISLKPNETQTVKFTL KQKDLQFVNEDLKWISEKGSFTVQIGDQKKDFLLK
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=755, Percent_Identity=34.8344370860927, Blast_Score=402, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 83991; Mature: 83991
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSIFCALMFLFCGAVWSQQVKNNKAEIDAKVSELLSKMTLEEKVGQMTQITVTIFEDA CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECC KKPGYFDAAKLKQGIQDYHIGSILNVPNPGAPTLKRWQETMQAITIEANKTRLKIPVLYG CCCCCCCHHHHHCCHHHHCCCCEECCCCCCCHHHHHHHHHHHEEEEEECCCEEEEEEEEC IDAIHGASYTAGATLFPQQIGLAATFNTDLVKRGAAISAYETRASSIPWVFSPDLDFPRN CHHHCCCCCCCCCEECHHHCCEEEECCHHHHHCCCEEEHHHHHCCCCCEEECCCCCCCCC PAWSRMWESFGEDAYLSSKMAVALVDGFEGNNNVGSKYSVASCMKHYIGYGSTTTGKDRT CHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC PSIIPERLLRQYDLTIYQAAINAGAKSVMVSSGEINGTPVHASKHLITDILKKELGFSGV CCHHHHHHHHHHCHHHEEHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCE VVTDWKDIIYLYTRHKVAESKRDAVRIAVMAGIDMSMVPEEFSFYTDLLDLVKKGEVPVS EEECHHHEEEEHHHHHHHHCCCCCEEEEEEECCCHHCCCHHHHHHHHHHHHHHCCCCCHH RIDDAVSRILKMKFELNLFQNTVADLKDYPKFGSAEHIEEAYNTAAESITLLKNNASVLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCEEEE LSKNEKVLVTGATANSMKYLNGGWSYTWQGENSDTYAADKFTILEAFQNKLGKENVLYTA ECCCCEEEEEECCCCCCCEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEC GADLEKEDDAEIQKAVELAKNASKIVLCLGEKNYTETPGDISDLYMSASQIKLALALAKV CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC NKPIILVLNEGRPRLISNFEDKMSAVVQCYLPGNEGARALVDILYGDVNPSGRLPYNYPR CCCEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCC YPNSLEKYNRKYTESISEGEQNNDAKYEKSYSPQFEFGTGLSYTTFVYSNLKIDKTEINN CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCC TDEVNVSVDVTNSGTRAGKESVLLYLSDNVASITPEFKSLKRFEKISLKPNETQTVKFTL CCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEE KQKDLQFVNEDLKWISEKGSFTVQIGDQKKDFLLK EHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MKNSIFCALMFLFCGAVWSQQVKNNKAEIDAKVSELLSKMTLEEKVGQMTQITVTIFEDA CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECC KKPGYFDAAKLKQGIQDYHIGSILNVPNPGAPTLKRWQETMQAITIEANKTRLKIPVLYG CCCCCCCHHHHHCCHHHHCCCCEECCCCCCCHHHHHHHHHHHEEEEEECCCEEEEEEEEC IDAIHGASYTAGATLFPQQIGLAATFNTDLVKRGAAISAYETRASSIPWVFSPDLDFPRN CHHHCCCCCCCCCEECHHHCCEEEECCHHHHHCCCEEEHHHHHCCCCCEEECCCCCCCCC PAWSRMWESFGEDAYLSSKMAVALVDGFEGNNNVGSKYSVASCMKHYIGYGSTTTGKDRT CHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC PSIIPERLLRQYDLTIYQAAINAGAKSVMVSSGEINGTPVHASKHLITDILKKELGFSGV CCHHHHHHHHHHCHHHEEHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCE VVTDWKDIIYLYTRHKVAESKRDAVRIAVMAGIDMSMVPEEFSFYTDLLDLVKKGEVPVS EEECHHHEEEEHHHHHHHHCCCCCEEEEEEECCCHHCCCHHHHHHHHHHHHHHCCCCCHH RIDDAVSRILKMKFELNLFQNTVADLKDYPKFGSAEHIEEAYNTAAESITLLKNNASVLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCEEEE LSKNEKVLVTGATANSMKYLNGGWSYTWQGENSDTYAADKFTILEAFQNKLGKENVLYTA ECCCCEEEEEECCCCCCCEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEC GADLEKEDDAEIQKAVELAKNASKIVLCLGEKNYTETPGDISDLYMSASQIKLALALAKV CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC NKPIILVLNEGRPRLISNFEDKMSAVVQCYLPGNEGARALVDILYGDVNPSGRLPYNYPR CCCEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCC YPNSLEKYNRKYTESISEGEQNNDAKYEKSYSPQFEFGTGLSYTTFVYSNLKIDKTEINN CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCC TDEVNVSVDVTNSGTRAGKESVLLYLSDNVASITPEFKSLKRFEKISLKPNETQTVKFTL CCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEE KQKDLQFVNEDLKWISEKGSFTVQIGDQKKDFLLK EHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]