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The map label for this gene is 146299322

Identifier: 146299322

GI number: 146299322

Start: 1812535

End: 1813998

Strand: Direct

Name: 146299322

Synonym: Fjoh_1562

Alternate gene names: NA

Gene position: 1812535-1813998 (Clockwise)

Preceding gene: 146299321

Following gene: 146299323

Centisome position: 29.73

GC content: 34.56

Gene sequence:

>1464_bases
ATGAAAAAAATGAAATTTATTATCACAACTTGTTTATGTTTCTCTTTATCTGTTTTTTCACAAACAAACCCAAAAAAGCA
GGTACAGAAATTTACAACAGCCAACAAAAAAATAACTGTTTATACTACTGCAGCAGATACGAATCTTAAACTAACTGCTA
CAGACAACTTAAGTTTTACAGCGTCGAAACAACCTGTTGAAACCGAAATATCAGTTTTTGTAGAACCTTCAAAAAAGTTT
CAAACCTTTATGGGGATTGGAGGTGCTGTAACAGATGCCAGTGCTGAGATCTTTGCTAAATTATCAAAAGAAAAACAAAC
CGAATTTTTAAATGCTTATTACGATGCTCAAAAAGGAATTGGGTATTCATTGCTAAGAACAACGATTCAAAGCTCTGATT
TTAGCAGTGGAAGCTATTCTTACATCGAAGAAGGAGATAAAGATTTAAAAACGTTTTCAATTGATCATGATAGAAAATAC
AGAATCCCATTAATTAAAGATGTTATAAAAACTGCAGGAGGAAAGCTACTGACTTACGCTACGCCCTGGTCACCAAATGC
ATTCATGAAAAGTAATAAAAGCGTACTTAAGGGCGGAAAATTACTTCCGGAATATTTCCAGCCATGGGCAAATTTTTACG
CAAAATTTATAAAAGCATATAATAAAGAAGGTATTCCAATCTGGGGGACATCGGTGCAAAATGAACCAATGGCAACACAG
ACTTGGGAATCTTGTTTATATACTGCAGAAGAAGAAAGAGATTATATAAAAAACTACTTAGGGCCAACACTTAAAAAAGA
AGGACTTGGAGATGTAAAAATTATTGCATGGGATCATAACAGAGATTTAATGGTACAGAGAGCCAATGTTATTTTCTCAG
ATCCGGAAGCTTCAAAATATGTATGGGGATTAGGTTTTCATTGGTATGAAACCTGGACAGGTGCACAGCCAATGTTTGAA
AACGTTGCCAGAGTGCACGAAGCTTATCCTGATAAAAAACTAATGTTTACCGAAGGATGTGTCGAAAGATTTGATGCGGC
AAAATACCAATTTTGGCCAAATGCAGAACGATACGGAACTTCTATGATAAACGATTTTAATAACGGAACTGTTGCATGGA
CTGACTGGAATATCCTTTTAGATCAATTTGGCGGGCCAAATCACGTTGGTAATTTCTGTTTTGCTCCAATTCATGCTGAT
ACTGTTACAGGAGAATTAATTTACACACCATCTTATTATTACATTGGACATTTTTCAAAATTCATTCGCCCAAATGCAGT
TCGTGTAAGTTCTTCAGTAAGCAGAAGCTATTTATTGAGCACGTCATTTTTAAATACCGATGGCAAAATGGCAACTATTG
TTATGAATCATACCGATAATGAAATTACATACAATTTTATTATTGCTGAGGAAAAAGCAATTGTAAAAATTCCTGCTCAT
GCAATCCAGACACTAGTATATTAA

Upstream 100 bases:

>100_bases
GCCCATATTCTTTATTGATTATGGGCTATTTTTTAAATCAGTCTGTGCTTAATTTCCAAGAAAAATAAATCAAAAGCCTA
TAGACTAACAAACATATACA

Downstream 100 bases:

>100_bases
TTTATCATAAAACAGTTTTTCTATTCATAAAAACATGATATCAACAAAAAGTATAGTACTGACATCGATACTAATTTTAC
AGCTGAGTTGTTCTCCGTCA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Glucan Endo-1 6-Beta-Glucosidase; Glycoside Hydrolase Family; O-Glycosyl Hydrolase Family; Glycoside Hydrolase Family Protein; O-Glycosyl Hydrolase; Glycosyl Hydrolase; Ricin B Lectin; O-Glycosyl Hydrolase Family Protein; Glucuronoarabinoxylan Endo-1 4-Beta-Xylanase; Glycoside Hydrolase; Lysosomal Glucosyl Ceramidase-Like Protein; Glucan EndO-1 6-Beta-Glucosidase; Glycosy Hydrolase Family Protein; Beta-Glycosidase; Helix-Turn-Helix AraC Type; Glycosyl Hydrolase Family; LPXTG-Motif Cell Wall Anchor Domain Protein; Glycosyl Hydrolases Family; Endo-1 6-Beta-D-Glucanase; Cellulosome Protein Dockerin Type I

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MKKMKFIITTCLCFSLSVFSQTNPKKQVQKFTTANKKITVYTTAADTNLKLTATDNLSFTASKQPVETEISVFVEPSKKF
QTFMGIGGAVTDASAEIFAKLSKEKQTEFLNAYYDAQKGIGYSLLRTTIQSSDFSSGSYSYIEEGDKDLKTFSIDHDRKY
RIPLIKDVIKTAGGKLLTYATPWSPNAFMKSNKSVLKGGKLLPEYFQPWANFYAKFIKAYNKEGIPIWGTSVQNEPMATQ
TWESCLYTAEEERDYIKNYLGPTLKKEGLGDVKIIAWDHNRDLMVQRANVIFSDPEASKYVWGLGFHWYETWTGAQPMFE
NVARVHEAYPDKKLMFTEGCVERFDAAKYQFWPNAERYGTSMINDFNNGTVAWTDWNILLDQFGGPNHVGNFCFAPIHAD
TVTGELIYTPSYYYIGHFSKFIRPNAVRVSSSVSRSYLLSTSFLNTDGKMATIVMNHTDNEITYNFIIAEEKAIVKIPAH
AIQTLVY

Sequences:

>Translated_487_residues
MKKMKFIITTCLCFSLSVFSQTNPKKQVQKFTTANKKITVYTTAADTNLKLTATDNLSFTASKQPVETEISVFVEPSKKF
QTFMGIGGAVTDASAEIFAKLSKEKQTEFLNAYYDAQKGIGYSLLRTTIQSSDFSSGSYSYIEEGDKDLKTFSIDHDRKY
RIPLIKDVIKTAGGKLLTYATPWSPNAFMKSNKSVLKGGKLLPEYFQPWANFYAKFIKAYNKEGIPIWGTSVQNEPMATQ
TWESCLYTAEEERDYIKNYLGPTLKKEGLGDVKIIAWDHNRDLMVQRANVIFSDPEASKYVWGLGFHWYETWTGAQPMFE
NVARVHEAYPDKKLMFTEGCVERFDAAKYQFWPNAERYGTSMINDFNNGTVAWTDWNILLDQFGGPNHVGNFCFAPIHAD
TVTGELIYTPSYYYIGHFSKFIRPNAVRVSSSVSRSYLLSTSFLNTDGKMATIVMNHTDNEITYNFIIAEEKAIVKIPAH
AIQTLVY
>Mature_487_residues
MKKMKFIITTCLCFSLSVFSQTNPKKQVQKFTTANKKITVYTTAADTNLKLTATDNLSFTASKQPVETEISVFVEPSKKF
QTFMGIGGAVTDASAEIFAKLSKEKQTEFLNAYYDAQKGIGYSLLRTTIQSSDFSSGSYSYIEEGDKDLKTFSIDHDRKY
RIPLIKDVIKTAGGKLLTYATPWSPNAFMKSNKSVLKGGKLLPEYFQPWANFYAKFIKAYNKEGIPIWGTSVQNEPMATQ
TWESCLYTAEEERDYIKNYLGPTLKKEGLGDVKIIAWDHNRDLMVQRANVIFSDPEASKYVWGLGFHWYETWTGAQPMFE
NVARVHEAYPDKKLMFTEGCVERFDAAKYQFWPNAERYGTSMINDFNNGTVAWTDWNILLDQFGGPNHVGNFCFAPIHAD
TVTGELIYTPSYYYIGHFSKFIRPNAVRVSSSVSRSYLLSTSFLNTDGKMATIVMNHTDNEITYNFIIAEEKAIVKIPAH
AIQTLVY

Specific function: Unknown

COG id: COG5520

COG function: function code M; O-Glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI284807150, Length=409, Percent_Identity=32.518337408313, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI54607043, Length=409, Percent_Identity=32.518337408313, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI54607045, Length=409, Percent_Identity=32.518337408313, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI54607047, Length=409, Percent_Identity=32.518337408313, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI284807152, Length=358, Percent_Identity=32.122905027933, Blast_Score=204, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17542884, Length=477, Percent_Identity=33.3333333333333, Blast_Score=251, Evalue=5e-67,
Organism=Caenorhabditis elegans, GI17539756, Length=503, Percent_Identity=30.8151093439364, Blast_Score=249, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI17539758, Length=497, Percent_Identity=30.784708249497, Blast_Score=249, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI25151335, Length=435, Percent_Identity=32.183908045977, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI115532470, Length=499, Percent_Identity=29.4589178356713, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI115532472, Length=449, Percent_Identity=30.2895322939866, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI193204210, Length=407, Percent_Identity=30.2211302211302, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI21355305, Length=497, Percent_Identity=29.5774647887324, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI161078544, Length=448, Percent_Identity=27.9017857142857, Blast_Score=166, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55280; Mature: 55280

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMKFIITTCLCFSLSVFSQTNPKKQVQKFTTANKKITVYTTAADTNLKLTATDNLSFT
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCEEEE
ASKQPVETEISVFVEPSKKFQTFMGIGGAVTDASAEIFAKLSKEKQTEFLNAYYDAQKGI
CCCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
GYSLLRTTIQSSDFSSGSYSYIEEGDKDLKTFSIDHDRKYRIPLIKDVIKTAGGKLLTYA
CHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEECCCCCEEECHHHHHHHHHCCCEEEEEE
TPWSPNAFMKSNKSVLKGGKLLPEYFQPWANFYAKFIKAYNKEGIPIWGTSVQNEPMATQ
CCCCCCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHH
TWESCLYTAEEERDYIKNYLGPTLKKEGLGDVKIIAWDHNRDLMVQRANVIFSDPEASKY
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCEEEECCCCCCE
VWGLGFHWYETWTGAQPMFENVARVHEAYPDKKLMFTEGCVERFDAAKYQFWPNAERYGT
EEECCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCEEECCCHHHHHH
SMINDFNNGTVAWTDWNILLDQFGGPNHVGNFCFAPIHADTVTGELIYTPSYYYIGHFSK
HHHHCCCCCEEEEEEHHHHEECCCCCCCCCCEEEEEEECCCCCCEEEECCCEEEHHHHHH
FIRPNAVRVSSSVSRSYLLSTSFLNTDGKMATIVMNHTDNEITYNFIIAEEKAIVKIPAH
HCCCCCEEEHHHHHHHHEEEEEEECCCCCEEEEEEECCCCEEEEEEEEECCCEEEEECHH
AIQTLVY
HHHHHCC
>Mature Secondary Structure
MKKMKFIITTCLCFSLSVFSQTNPKKQVQKFTTANKKITVYTTAADTNLKLTATDNLSFT
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCEEEE
ASKQPVETEISVFVEPSKKFQTFMGIGGAVTDASAEIFAKLSKEKQTEFLNAYYDAQKGI
CCCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
GYSLLRTTIQSSDFSSGSYSYIEEGDKDLKTFSIDHDRKYRIPLIKDVIKTAGGKLLTYA
CHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEECCCCCEEECHHHHHHHHHCCCEEEEEE
TPWSPNAFMKSNKSVLKGGKLLPEYFQPWANFYAKFIKAYNKEGIPIWGTSVQNEPMATQ
CCCCCCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHH
TWESCLYTAEEERDYIKNYLGPTLKKEGLGDVKIIAWDHNRDLMVQRANVIFSDPEASKY
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCEEEECCCCCCE
VWGLGFHWYETWTGAQPMFENVARVHEAYPDKKLMFTEGCVERFDAAKYQFWPNAERYGT
EEECCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCEEECCCHHHHHH
SMINDFNNGTVAWTDWNILLDQFGGPNHVGNFCFAPIHADTVTGELIYTPSYYYIGHFSK
HHHHCCCCCEEEEEEHHHHEECCCCCCCCCCEEEEEEECCCCCCEEEECCCEEEHHHHHH
FIRPNAVRVSSSVSRSYLLSTSFLNTDGKMATIVMNHTDNEITYNFIIAEEKAIVKIPAH
HCCCCCEEEHHHHHHHHEEEEEEECCCCCEEEEEEECCCCEEEEEEEEECCCEEEEECHH
AIQTLVY
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA