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The map label for this gene is 146299230

Identifier: 146299230

GI number: 146299230

Start: 1684422

End: 1684718

Strand: Direct

Name: 146299230

Synonym: Fjoh_1470

Alternate gene names: NA

Gene position: 1684422-1684718 (Clockwise)

Preceding gene: 146299225

Following gene: 146299235

Centisome position: 27.63

GC content: 36.36

Gene sequence:

>297_bases
ATGTCTTTGAAGAAACAATTTATCAAAACGAAGCCGGTTGTTAAAGTTACATTTTCAATAGATGCCAAAGATGCTGATTC
GGCAGCAGTCGTTGGAGATTTTAATAACTGGAACGCTTCAGAAGGTGCTTTAAGCAAGTTGAAGAACGGAACTTTTAAAG
CTACTTATGATTTGGTTAAAGACGCGATTTACGAATTTAAGTACGTAATCGACGGAACGTATGTTAACGACCCAGAAGCT
GATTTTTACAAATGGAATGACTATGCCGGAAGTGAAAATGGAGTTTTAGTTGTATAA

Upstream 100 bases:

>100_bases
ATATAGTGTTTTTAGTATTATCGTAAATCGATTGTGACTTCGTTACTATTTGACGGAATTTACTTAATTTAGGATCTATA
AATCTAAAAACGAAATAGTT

Downstream 100 bases:

>100_bases
AAAAATCCGCTTAAATATTTAAGCGGATTTTTTTATAATTATACAGCAACACTTCCTTGTATGGCAGGATGCGGGTCATA
ATCTACTAAAGTGAAATCGT

Product: glycoside hydrolase family 13 protein

Products: NA

Alternate protein names: Isoamylase N-Terminal Domain-Containing Protein; Glycoside Hydrolase Family Protein; Isoamylase Protein-Like Protein; Isoamylase-Like Protein; Isoamylase Protein; Isoamylase N-Terminal Domain Protein; Isoamylase Protein-Like

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSLKKQFIKTKPVVKVTFSIDAKDADSAAVVGDFNNWNASEGALSKLKNGTFKATYDLVKDAIYEFKYVIDGTYVNDPEA
DFYKWNDYAGSENGVLVV

Sequences:

>Translated_98_residues
MSLKKQFIKTKPVVKVTFSIDAKDADSAAVVGDFNNWNASEGALSKLKNGTFKATYDLVKDAIYEFKYVIDGTYVNDPEA
DFYKWNDYAGSENGVLVV
>Mature_97_residues
SLKKQFIKTKPVVKVTFSIDAKDADSAAVVGDFNNWNASEGALSKLKNGTFKATYDLVKDAIYEFKYVIDGTYVNDPEAD
FYKWNDYAGSENGVLVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10900; Mature: 10769

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKKQFIKTKPVVKVTFSIDAKDADSAAVVGDFNNWNASEGALSKLKNGTFKATYDLVK
CCCHHHHHCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHH
DAIYEFKYVIDGTYVNDPEADFYKWNDYAGSENGVLVV
HHHHHEEEEECCEECCCCCCCEEEECCCCCCCCCEEEC
>Mature Secondary Structure 
SLKKQFIKTKPVVKVTFSIDAKDADSAAVVGDFNNWNASEGALSKLKNGTFKATYDLVK
CCHHHHHCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHH
DAIYEFKYVIDGTYVNDPEADFYKWNDYAGSENGVLVV
HHHHHEEEEECCEECCCCCCCEEEECCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA