| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299122
Identifier: 146299122
GI number: 146299122
Start: 1558277
End: 1558651
Strand: Direct
Name: 146299122
Synonym: Fjoh_1362
Alternate gene names: NA
Gene position: 1558277-1558651 (Clockwise)
Preceding gene: 146299121
Following gene: 146299123
Centisome position: 25.56
GC content: 34.4
Gene sequence:
>375_bases ATGATACAATTATCTAACGCAGAAGAACAATTAATGGAGCATTTATGGAAGCTTGAAAAAGCTTTTATGAAAGATTTGCT CGAAGCGTATCCGGAGCCGAAACCGGCAACAACAACCGTAGCAACGCTTTTAAAACGAATGATCGACAAGAAATTTGTGG CGTATAACGAATTTGGAAATTCGAGAGAATATTATCCGCTGGTAAAAAAGACAGACTATTTTGCAAAACATGTAAAAGGG CTCATTAGTAATTTCTTTAATAATTCGGCATCGCAGTTTGCTTCGTTTTTTACTACCGAAACCAATTTAACAGCTTCGGA ACTGGAAGATCTTAAAAAAATAATCGATTCAGAAATTCAAAAAAAGAAAAAATGA
Upstream 100 bases:
>100_bases GTACAATGGCCGAATATGTTGCAAAAATGAATATTGAATGGAATTTGGAGCAATACAAAAAAGAATTAGCTGAAATAGAA AAACTTGAAAATACGAAACC
Downstream 100 bases:
>100_bases TAACCTATCTTTTAAAATCAGGAATACTGCTTTTTGTTTTTTATGCAGTATATAAATTGTTGTTGGAGAACGAAAAAATG TTTCGTTTTAACCGTGCCTA
Product: CopY family transcriptional regulator
Products: NA
Alternate protein names: Antibiotic Resistance-Related Regulatory Protein; Transcriptional Repressor CopY Family; Transcriptional Repressor Copy Family; Penicillinase Repressor; CopY Family Transcriptional Regulator; BlaI-Like Antibiotic Resistance-Related Regulatory Protein
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MIQLSNAEEQLMEHLWKLEKAFMKDLLEAYPEPKPATTTVATLLKRMIDKKFVAYNEFGNSREYYPLVKKTDYFAKHVKG LISNFFNNSASQFASFFTTETNLTASELEDLKKIIDSEIQKKKK
Sequences:
>Translated_124_residues MIQLSNAEEQLMEHLWKLEKAFMKDLLEAYPEPKPATTTVATLLKRMIDKKFVAYNEFGNSREYYPLVKKTDYFAKHVKG LISNFFNNSASQFASFFTTETNLTASELEDLKKIIDSEIQKKKK >Mature_124_residues MIQLSNAEEQLMEHLWKLEKAFMKDLLEAYPEPKPATTTVATLLKRMIDKKFVAYNEFGNSREYYPLVKKTDYFAKHVKG LISNFFNNSASQFASFFTTETNLTASELEDLKKIIDSEIQKKKK
Specific function: Unknown
COG id: COG3682
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14438; Mature: 14438
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQLSNAEEQLMEHLWKLEKAFMKDLLEAYPEPKPATTTVATLLKRMIDKKFVAYNEFGN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC SREYYPLVKKTDYFAKHVKGLISNFFNNSASQFASFFTTETNLTASELEDLKKIIDSEIQ CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH KKKK HCCC >Mature Secondary Structure MIQLSNAEEQLMEHLWKLEKAFMKDLLEAYPEPKPATTTVATLLKRMIDKKFVAYNEFGN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC SREYYPLVKKTDYFAKHVKGLISNFFNNSASQFASFFTTETNLTASELEDLKKIIDSEIQ CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH KKKK HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA