Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146299122

Identifier: 146299122

GI number: 146299122

Start: 1558277

End: 1558651

Strand: Direct

Name: 146299122

Synonym: Fjoh_1362

Alternate gene names: NA

Gene position: 1558277-1558651 (Clockwise)

Preceding gene: 146299121

Following gene: 146299123

Centisome position: 25.56

GC content: 34.4

Gene sequence:

>375_bases
ATGATACAATTATCTAACGCAGAAGAACAATTAATGGAGCATTTATGGAAGCTTGAAAAAGCTTTTATGAAAGATTTGCT
CGAAGCGTATCCGGAGCCGAAACCGGCAACAACAACCGTAGCAACGCTTTTAAAACGAATGATCGACAAGAAATTTGTGG
CGTATAACGAATTTGGAAATTCGAGAGAATATTATCCGCTGGTAAAAAAGACAGACTATTTTGCAAAACATGTAAAAGGG
CTCATTAGTAATTTCTTTAATAATTCGGCATCGCAGTTTGCTTCGTTTTTTACTACCGAAACCAATTTAACAGCTTCGGA
ACTGGAAGATCTTAAAAAAATAATCGATTCAGAAATTCAAAAAAAGAAAAAATGA

Upstream 100 bases:

>100_bases
GTACAATGGCCGAATATGTTGCAAAAATGAATATTGAATGGAATTTGGAGCAATACAAAAAAGAATTAGCTGAAATAGAA
AAACTTGAAAATACGAAACC

Downstream 100 bases:

>100_bases
TAACCTATCTTTTAAAATCAGGAATACTGCTTTTTGTTTTTTATGCAGTATATAAATTGTTGTTGGAGAACGAAAAAATG
TTTCGTTTTAACCGTGCCTA

Product: CopY family transcriptional regulator

Products: NA

Alternate protein names: Antibiotic Resistance-Related Regulatory Protein; Transcriptional Repressor CopY Family; Transcriptional Repressor Copy Family; Penicillinase Repressor; CopY Family Transcriptional Regulator; BlaI-Like Antibiotic Resistance-Related Regulatory Protein

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MIQLSNAEEQLMEHLWKLEKAFMKDLLEAYPEPKPATTTVATLLKRMIDKKFVAYNEFGNSREYYPLVKKTDYFAKHVKG
LISNFFNNSASQFASFFTTETNLTASELEDLKKIIDSEIQKKKK

Sequences:

>Translated_124_residues
MIQLSNAEEQLMEHLWKLEKAFMKDLLEAYPEPKPATTTVATLLKRMIDKKFVAYNEFGNSREYYPLVKKTDYFAKHVKG
LISNFFNNSASQFASFFTTETNLTASELEDLKKIIDSEIQKKKK
>Mature_124_residues
MIQLSNAEEQLMEHLWKLEKAFMKDLLEAYPEPKPATTTVATLLKRMIDKKFVAYNEFGNSREYYPLVKKTDYFAKHVKG
LISNFFNNSASQFASFFTTETNLTASELEDLKKIIDSEIQKKKK

Specific function: Unknown

COG id: COG3682

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14438; Mature: 14438

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLSNAEEQLMEHLWKLEKAFMKDLLEAYPEPKPATTTVATLLKRMIDKKFVAYNEFGN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
SREYYPLVKKTDYFAKHVKGLISNFFNNSASQFASFFTTETNLTASELEDLKKIIDSEIQ
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KKKK
HCCC
>Mature Secondary Structure
MIQLSNAEEQLMEHLWKLEKAFMKDLLEAYPEPKPATTTVATLLKRMIDKKFVAYNEFGN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
SREYYPLVKKTDYFAKHVKGLISNFFNNSASQFASFFTTETNLTASELEDLKKIIDSEIQ
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KKKK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA