| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299107
Identifier: 146299107
GI number: 146299107
Start: 1540370
End: 1540954
Strand: Direct
Name: 146299107
Synonym: Fjoh_1347
Alternate gene names: NA
Gene position: 1540370-1540954 (Clockwise)
Preceding gene: 146299106
Following gene: 146299108
Centisome position: 25.26
GC content: 35.04
Gene sequence:
>585_bases ATGAAAACTTTAAAAATACTTTTTACCATATTATCTGCGGCGATTTTTACTGTTTCGTGCAGCAGTGACGACGATAAAGA CAATACACCAAAATTTGAGACAGAAAATCCACTGGCGGTTTATTATACTCAAACAGGATTTACAACCGTAACCAATTTTG TAAACTCTGGAGATTATGAATTTGGGCTGGTTTTTACACCAACTGTAAAAGGGAATATAAAGGCAGTCACTTTAAAATTG CCTGCAGTGAATTCGGCAGTGCGTGTAACGATCTGGGACTATACAACAAAAGCAGTGCTTCGTTCTGAGACTATAAATGC TGCATCTGCAGATGTTGAGGTGAAAAAAGAAATAAGCGTTTTAGCTCTTGAAAAAGACAAAAAATATTTGATAAGCATGA ATTCTAATGACTGGTACAAAAAGAATAAAGCAGATCTTAGTAATGTTACTTATCCAATCGTTGCCGGACACATTACGTTT AATGAATACAGATGGATAAGCGGAACTTCACAAACTTTCCCAACCAATGTTTCAGCTAATTACAATGCAGGAGATTTAAG TTTTGATTTTCAACAAACTGAATAA
Upstream 100 bases:
>100_bases AAGAAGTTTGCGCACGTTTAAACATTCAGCCATAATTTCTGAAAAGCAAATAATAACCCATTTATCCAACTAATAAGAAC TAATCAAAAAATAAATTATT
Downstream 100 bases:
>100_bases TTTTATTTTTGGATAGCTTTGAATTAGTAAGTTTGGAAAAAGGTTTGGCAGCTGCCAAACCTTTTTTTATTGTGTATGAC TTTTTTTTAAACGCTTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKTLKILFTILSAAIFTVSCSSDDDKDNTPKFETENPLAVYYTQTGFTTVTNFVNSGDYEFGLVFTPTVKGNIKAVTLKL PAVNSAVRVTIWDYTTKAVLRSETINAASADVEVKKEISVLALEKDKKYLISMNSNDWYKKNKADLSNVTYPIVAGHITF NEYRWISGTSQTFPTNVSANYNAGDLSFDFQQTE
Sequences:
>Translated_194_residues MKTLKILFTILSAAIFTVSCSSDDDKDNTPKFETENPLAVYYTQTGFTTVTNFVNSGDYEFGLVFTPTVKGNIKAVTLKL PAVNSAVRVTIWDYTTKAVLRSETINAASADVEVKKEISVLALEKDKKYLISMNSNDWYKKNKADLSNVTYPIVAGHITF NEYRWISGTSQTFPTNVSANYNAGDLSFDFQQTE >Mature_194_residues MKTLKILFTILSAAIFTVSCSSDDDKDNTPKFETENPLAVYYTQTGFTTVTNFVNSGDYEFGLVFTPTVKGNIKAVTLKL PAVNSAVRVTIWDYTTKAVLRSETINAASADVEVKKEISVLALEKDKKYLISMNSNDWYKKNKADLSNVTYPIVAGHITF NEYRWISGTSQTFPTNVSANYNAGDLSFDFQQTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21621; Mature: 21621
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLKILFTILSAAIFTVSCSSDDDKDNTPKFETENPLAVYYTQTGFTTVTNFVNSGDYE CCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHHCCCCEE FGLVFTPTVKGNIKAVTLKLPAVNSAVRVTIWDYTTKAVLRSETINAASADVEVKKEISV EEEEECCCCCCCEEEEEEECCCCCCEEEEEEECCCEEEHHHHCCCCCCCCCEEEECCEEE LALEKDKKYLISMNSNDWYKKNKADLSNVTYPIVAGHITFNEYRWISGTSQTFPTNVSAN EEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEECCCCCCCCCCCCCC YNAGDLSFDFQQTE CCCCCEEEEEECCC >Mature Secondary Structure MKTLKILFTILSAAIFTVSCSSDDDKDNTPKFETENPLAVYYTQTGFTTVTNFVNSGDYE CCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHHCCCCEE FGLVFTPTVKGNIKAVTLKLPAVNSAVRVTIWDYTTKAVLRSETINAASADVEVKKEISV EEEEECCCCCCCEEEEEEECCCCCCEEEEEEECCCEEEHHHHCCCCCCCCCEEEECCEEE LALEKDKKYLISMNSNDWYKKNKADLSNVTYPIVAGHITFNEYRWISGTSQTFPTNVSAN EEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEECCCCCCCCCCCCCC YNAGDLSFDFQQTE CCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA