Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146299071

Identifier: 146299071

GI number: 146299071

Start: 1499344

End: 1500270

Strand: Direct

Name: 146299071

Synonym: Fjoh_1311

Alternate gene names: NA

Gene position: 1499344-1500270 (Clockwise)

Preceding gene: 146299070

Following gene: 146299076

Centisome position: 24.59

GC content: 35.17

Gene sequence:

>927_bases
ATGAAAAAGAACCTATTTTTATTAGGACTATTAGTTTGCTCAATGACAGCTGTGGCGCAGACAGAAAAAGCAGAAAAACC
AGAAAGCTGGTATTTCAAATTAGGAGGATCATATTTTAATCAGACTGCTTCAACTGAATTTCCAACTGTTGGAGGGCATG
ATGCAATGGATAGAACTTATGTAGGAGGAAAATTAGTATCTGAAAAAAGTGTTACTGGTTCTTTTGGACAAGGTTTTAGA
ACAGGAATCACTGCTGGTTACCGTTTTTCTACAAGAATTGGTTTTGAATTAGGTGTAAATTACTATACAAGTAATGATAA
AAAGATGGCACAAACTACTTCGGATGTGCCTATCACTCCAGCTGGTGTGTATAGTTTTAAATCGGTAGGTCAAATTACTG
CTTTTGATGTTGCTCCAGCCGTAGTAATGTTTTTAGGAGAACATAAAGGATTTGAGCCTTATACTAAAGTTGGTGTTTTA
GTTCCAATTCATGGAGATTTAGAAATCACTTCAGATGCATATGCTCCAATTGCTTTTAGTCCAACAGGAACTCCAACTGC
TTTTGGAAATGTTCACAGTGTTGATAAAGTAAAACCAAATCCAACTATTGGATTTACAGCAGCATTAGGTACAACTTATA
AACTTACTTCACACCTTTCAGCTTTTGCAGAATTAGAGTACCGTAACTTTACTGTACATGGTAAAACAAAAGAAACAACT
GAATTTACTGTAAACGGACAAGATGCTTTAGCTACCAGAACTACTGCTCAAATCCATACTAATTACAGAGACGGTTTAGA
TGTGAATTCAAACAATGCTGCAACAAATCCTAATGGAGTTAACAAAGATAAACCAATGGATGAGTTAAGCTCTTATGTAG
GTATTTCAGGTTTAGGATTAACACTTGGAATTAAATACAGCCTTTAA

Upstream 100 bases:

>100_bases
TTGCTTGAAATTACAACGATTTCGTACCAAGTCTAACTAATCCAAATTACAGAATATGTTAAGATATTCTAAATTTGTAT
AAATCAATTAAATCAGAATT

Downstream 100 bases:

>100_bases
ATTTTATAGAAGTTTTTTAGTTTTTAGAAAAGAGGATATTCGTTAAGAATATCCTCTTTTTTTATGTGAGATTTCTTCTT
TTTGGCGAAATACTATTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKKNLFLLGLLVCSMTAVAQTEKAEKPESWYFKLGGSYFNQTASTEFPTVGGHDAMDRTYVGGKLVSEKSVTGSFGQGFR
TGITAGYRFSTRIGFELGVNYYTSNDKKMAQTTSDVPITPAGVYSFKSVGQITAFDVAPAVVMFLGEHKGFEPYTKVGVL
VPIHGDLEITSDAYAPIAFSPTGTPTAFGNVHSVDKVKPNPTIGFTAALGTTYKLTSHLSAFAELEYRNFTVHGKTKETT
EFTVNGQDALATRTTAQIHTNYRDGLDVNSNNAATNPNGVNKDKPMDELSSYVGISGLGLTLGIKYSL

Sequences:

>Translated_308_residues
MKKNLFLLGLLVCSMTAVAQTEKAEKPESWYFKLGGSYFNQTASTEFPTVGGHDAMDRTYVGGKLVSEKSVTGSFGQGFR
TGITAGYRFSTRIGFELGVNYYTSNDKKMAQTTSDVPITPAGVYSFKSVGQITAFDVAPAVVMFLGEHKGFEPYTKVGVL
VPIHGDLEITSDAYAPIAFSPTGTPTAFGNVHSVDKVKPNPTIGFTAALGTTYKLTSHLSAFAELEYRNFTVHGKTKETT
EFTVNGQDALATRTTAQIHTNYRDGLDVNSNNAATNPNGVNKDKPMDELSSYVGISGLGLTLGIKYSL
>Mature_308_residues
MKKNLFLLGLLVCSMTAVAQTEKAEKPESWYFKLGGSYFNQTASTEFPTVGGHDAMDRTYVGGKLVSEKSVTGSFGQGFR
TGITAGYRFSTRIGFELGVNYYTSNDKKMAQTTSDVPITPAGVYSFKSVGQITAFDVAPAVVMFLGEHKGFEPYTKVGVL
VPIHGDLEITSDAYAPIAFSPTGTPTAFGNVHSVDKVKPNPTIGFTAALGTTYKLTSHLSAFAELEYRNFTVHGKTKETT
EFTVNGQDALATRTTAQIHTNYRDGLDVNSNNAATNPNGVNKDKPMDELSSYVGISGLGLTLGIKYSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33118; Mature: 33118

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLFLLGLLVCSMTAVAQTEKAEKPESWYFKLGGSYFNQTASTEFPTVGGHDAMDRTY
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCCCEE
VGGKLVSEKSVTGSFGQGFRTGITAGYRFSTRIGFELGVNYYTSNDKKMAQTTSDVPITP
CCCEEECCCCCCCCCCCCHHHHCCCCEEEEEEEEEEECCEEEECCCCEEHHCCCCCCCCC
AGVYSFKSVGQITAFDVAPAVVMFLGEHKGFEPYTKVGVLVPIHGDLEITSDAYAPIAFS
CCCHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCEEECCCCCCCEEEC
PTGTPTAFGNVHSVDKVKPNPTIGFTAALGTTYKLTSHLSAFAELEYRNFTVHGKTKETT
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHHHEEEEEEEEEECCCCCCE
EFTVNGQDALATRTTAQIHTNYRDGLDVNSNNAATNPNGVNKDKPMDELSSYVGISGLGL
EEEECCCHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEE
TLGIKYSL
EEEEEECC
>Mature Secondary Structure
MKKNLFLLGLLVCSMTAVAQTEKAEKPESWYFKLGGSYFNQTASTEFPTVGGHDAMDRTY
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCCCEE
VGGKLVSEKSVTGSFGQGFRTGITAGYRFSTRIGFELGVNYYTSNDKKMAQTTSDVPITP
CCCEEECCCCCCCCCCCCHHHHCCCCEEEEEEEEEEECCEEEECCCCEEHHCCCCCCCCC
AGVYSFKSVGQITAFDVAPAVVMFLGEHKGFEPYTKVGVLVPIHGDLEITSDAYAPIAFS
CCCHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCEEECCCCCCCEEEC
PTGTPTAFGNVHSVDKVKPNPTIGFTAALGTTYKLTSHLSAFAELEYRNFTVHGKTKETT
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHHHEEEEEEEEEECCCCCCE
EFTVNGQDALATRTTAQIHTNYRDGLDVNSNNAATNPNGVNKDKPMDELSSYVGISGLGL
EEEECCCHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEE
TLGIKYSL
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA