| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299057
Identifier: 146299057
GI number: 146299057
Start: 1481112
End: 1482407
Strand: Direct
Name: 146299057
Synonym: Fjoh_1297
Alternate gene names: NA
Gene position: 1481112-1482407 (Clockwise)
Preceding gene: 146299056
Following gene: 146299058
Centisome position: 24.29
GC content: 33.33
Gene sequence:
>1296_bases ATGGCAGAAAATAACGATACGTTTGAATTAAGAAGTGAAGAAGTTCAGGACATTCTCACCAAAGTGCCTCATTGGATGAT ACGCTGGGGAACAGTTATGATTTTTGCGATTATTGTCATACTCTTTTTTGTTTCATGGTTTATTAAATATCCCGATGTTG TAAATACTGAAATTATAATTACAACCAATATTCCGCCAGAGAAAATCGTATCAAAATCATCTGGAAGAATTGAAGCAATT TTGGTGAAAAATAAAGCAATAGTGTCTAAAAATAAAACACTTGCAGTTATAGAAAATACAGCAAATTATAAAGATGTTTT TTTGCTGAAAAGTATAACCGACAGTTACAATATTAACGATCCGCAAGCCCAATTTCCGTTTTCGAAGTTAAAAAACACGC AGTTAGGCGAAATAGAAAGTGCTTATGCTGTTTTTCAGAAAGATTACCAGGCGCAGCAATTGAATCATGATCTGCAGCCT TTTGCTATAGAAAACAGAGCTCAGGTTTCAGAGAAAATTCAAATCAAAGAAAGGCTGGAAATTTTAGAACAGCAAAAAGT AATTAATGAAAGCGAATTACAGCTTCAGAAAAACGAGATTGCCCGTTTTGAAGTTTTGTTCAACAAAGGAATTATTTCGG CTCAGGAAATGGAAGCAAAGAAATTAGGTTTTCTTCAGGCGCAAAAGAGTTATAGAGGGCTTTTGTCGTCTATTTCCCAA TTAAAGTCCTCACTTATTGATAATACAAAATCAAGTCAGAATTCGCATATAAACAGCACTAAAGAGGAAGTTAACTTAGG AAGGAATATGGCACAGTCCTTTTTTCAGCTTAAAAAAGTTATAAAAGACTGGGAACTGGCTTATGCTTTAAAATCTTCAA TCAGCGGAAAAGTCACCTTTTTGCAGATCTGGACAGAAAACCAAACTATAAATTCCGGAGATAATGTTTTTTCGATTATT CCCGATGCTAAAAATGGTTTTATAGGAAAAGTAAAAGCGCCTGCATTAAACTCAGGAAAAATAAAAATAGGGCAGAGGGT TAATATACGTCTGGCTAATTTTCCTGATAAGGAATTTGGTGTTTTAAAAGGAAAAATTCAAAATATTTCTCTGGTTCCGG ATAAAGATGGAAATCTTCTTATAGATGTAGCTCTTCCAAACGGTTTAAAAACATCATACAATAGACAAATTACTTTTCAG CAGGAAATGAAAGGAAGTGCAGAAATTGTAACAGAAGATCTTCGATTAATAGAAAGAATTTTATATCAGTTTAAAAGTAT TTTTGAGCAGGTTTAG
Upstream 100 bases:
>100_bases AAGGGAAAATTATCGAAATAGGAAATCATACCGCTTTAGTAGAGCAAAAAGGAAATTACTTTGAATTGGTTAAAAATCAG TTACAGTTAGGAAATTAATT
Downstream 100 bases:
>100_bases AATTTCAAAATAAAATATTTTATATATGAAAGATTTGCCTTCAATTGCAATAATGACCTGTTGGTATGGAGATTATCCGT GGTACTTTCCTTATTTCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MAENNDTFELRSEEVQDILTKVPHWMIRWGTVMIFAIIVILFFVSWFIKYPDVVNTEIIITTNIPPEKIVSKSSGRIEAI LVKNKAIVSKNKTLAVIENTANYKDVFLLKSITDSYNINDPQAQFPFSKLKNTQLGEIESAYAVFQKDYQAQQLNHDLQP FAIENRAQVSEKIQIKERLEILEQQKVINESELQLQKNEIARFEVLFNKGIISAQEMEAKKLGFLQAQKSYRGLLSSISQ LKSSLIDNTKSSQNSHINSTKEEVNLGRNMAQSFFQLKKVIKDWELAYALKSSISGKVTFLQIWTENQTINSGDNVFSII PDAKNGFIGKVKAPALNSGKIKIGQRVNIRLANFPDKEFGVLKGKIQNISLVPDKDGNLLIDVALPNGLKTSYNRQITFQ QEMKGSAEIVTEDLRLIERILYQFKSIFEQV
Sequences:
>Translated_431_residues MAENNDTFELRSEEVQDILTKVPHWMIRWGTVMIFAIIVILFFVSWFIKYPDVVNTEIIITTNIPPEKIVSKSSGRIEAI LVKNKAIVSKNKTLAVIENTANYKDVFLLKSITDSYNINDPQAQFPFSKLKNTQLGEIESAYAVFQKDYQAQQLNHDLQP FAIENRAQVSEKIQIKERLEILEQQKVINESELQLQKNEIARFEVLFNKGIISAQEMEAKKLGFLQAQKSYRGLLSSISQ LKSSLIDNTKSSQNSHINSTKEEVNLGRNMAQSFFQLKKVIKDWELAYALKSSISGKVTFLQIWTENQTINSGDNVFSII PDAKNGFIGKVKAPALNSGKIKIGQRVNIRLANFPDKEFGVLKGKIQNISLVPDKDGNLLIDVALPNGLKTSYNRQITFQ QEMKGSAEIVTEDLRLIERILYQFKSIFEQV >Mature_430_residues AENNDTFELRSEEVQDILTKVPHWMIRWGTVMIFAIIVILFFVSWFIKYPDVVNTEIIITTNIPPEKIVSKSSGRIEAIL VKNKAIVSKNKTLAVIENTANYKDVFLLKSITDSYNINDPQAQFPFSKLKNTQLGEIESAYAVFQKDYQAQQLNHDLQPF AIENRAQVSEKIQIKERLEILEQQKVINESELQLQKNEIARFEVLFNKGIISAQEMEAKKLGFLQAQKSYRGLLSSISQL KSSLIDNTKSSQNSHINSTKEEVNLGRNMAQSFFQLKKVIKDWELAYALKSSISGKVTFLQIWTENQTINSGDNVFSIIP DAKNGFIGKVKAPALNSGKIKIGQRVNIRLANFPDKEFGVLKGKIQNISLVPDKDGNLLIDVALPNGLKTSYNRQITFQQ EMKGSAEIVTEDLRLIERILYQFKSIFEQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49028; Mature: 48897
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAENNDTFELRSEEVQDILTKVPHWMIRWGTVMIFAIIVILFFVSWFIKYPDVVNTEIII CCCCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE TTNIPPEKIVSKSSGRIEAILVKNKAIVSKNKTLAVIENTANYKDVFLLKSITDSYNIND ECCCCHHHHHCCCCCCEEEEEEECCEEEECCCEEEEEECCCCCCCEEEEEHHCCCCCCCC PQAQFPFSKLKNTQLGEIESAYAVFQKDYQAQQLNHDLQPFAIENRAQVSEKIQIKERLE CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHH ILEQQKVINESELQLQKNEIARFEVLFNKGIISAQEMEAKKLGFLQAQKSYRGLLSSISQ HHHHHHHCCHHHHHHHHHHHHEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LKSSLIDNTKSSQNSHINSTKEEVNLGRNMAQSFFQLKKVIKDWELAYALKSSISGKVTF HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LQIWTENQTINSGDNVFSIIPDAKNGFIGKVKAPALNSGKIKIGQRVNIRLANFPDKEFG EEEEECCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCEEECCEEEEEEECCCCHHHH VLKGKIQNISLVPDKDGNLLIDVALPNGLKTSYNRQITFQQEMKGSAEIVTEDLRLIERI HHHCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHH LYQFKSIFEQV HHHHHHHHHCC >Mature Secondary Structure AENNDTFELRSEEVQDILTKVPHWMIRWGTVMIFAIIVILFFVSWFIKYPDVVNTEIII CCCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE TTNIPPEKIVSKSSGRIEAILVKNKAIVSKNKTLAVIENTANYKDVFLLKSITDSYNIND ECCCCHHHHHCCCCCCEEEEEEECCEEEECCCEEEEEECCCCCCCEEEEEHHCCCCCCCC PQAQFPFSKLKNTQLGEIESAYAVFQKDYQAQQLNHDLQPFAIENRAQVSEKIQIKERLE CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHH ILEQQKVINESELQLQKNEIARFEVLFNKGIISAQEMEAKKLGFLQAQKSYRGLLSSISQ HHHHHHHCCHHHHHHHHHHHHEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LKSSLIDNTKSSQNSHINSTKEEVNLGRNMAQSFFQLKKVIKDWELAYALKSSISGKVTF HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LQIWTENQTINSGDNVFSIIPDAKNGFIGKVKAPALNSGKIKIGQRVNIRLANFPDKEFG EEEEECCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCEEECCEEEEEEECCCCHHHH VLKGKIQNISLVPDKDGNLLIDVALPNGLKTSYNRQITFQQEMKGSAEIVTEDLRLIERI HHHCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHH LYQFKSIFEQV HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA