| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299037
Identifier: 146299037
GI number: 146299037
Start: 1459237
End: 1460880
Strand: Direct
Name: 146299037
Synonym: Fjoh_1277
Alternate gene names: NA
Gene position: 1459237-1460880 (Clockwise)
Preceding gene: 146299036
Following gene: 146299038
Centisome position: 23.93
GC content: 32.18
Gene sequence:
>1644_bases ATGAAAAAAATTACTTTATTTCTTTTTATTACATTTTCACAAATTACATTCTGCGCTCCTAAAATTACTGAAACCGAAAA ACTCTTTGCAACCTGCAAAGTCTGGGGTTTCTTAAAATATTATCATCCAAAAGCAGCCAGTGGAGAAGTCAATTGGGATA AGCAGCTTTTAGAAAAACTTCCTAAAATAGAAAAAGCACAAACCAAAGAAGAGTTTTCACTGCTTCTTGAAAACTGGATT GACGATCTTGGACCAGTAAAAGAAATTGCACCAATTCCTGCACCAAAAGATGTGGAGCTTTTTGATAAGAATTTCGATTT ATCCTGGTTTAATAATAAGTTGTTTTCTAAAAAACTTTCGAAGAAATTAAAATTTATTGAAGAAAACAGGTTTCAAAGCA ATGAAGATTTTGAACATGGTTTTGATGGTTTAAAAATGACAAAAAACTATTTTGATCTTGATTATAACAATAAAGATTCC AGAATATTAATGCTTTTTGCCTATTGGAATTTAATTGAATATTATTTTCCATATAAATATATCATGGATCAAAAATGGGA TTTGAGTTTAGAACAGTCACTGCCATCTATCGCTGATGCTAAAAATGAAGCTGATTTTTATCTCGCACTTAAAAAACTAA CATCAAAACTTAATGACAGCCACGTCGAAACTCCAATTTATGGCCCAACTGTTTATCGCTCATTAAATCATTTCCCTGCA GCAGGCAAAATAATCGATGATAAATTGGTTATTACCGAGATTTTAGGAGATAGTCTTGCCGAAGCAGATAATATTAAAAT AGGAACTGTAATTACTAAAATAAATGGTAAAACCATAAAAGAATTAATCGAGCAAAACAGAGATTTAGTATGTGCATCAA ACGAAGCTAAACTTTTAGATAAAGTAGTTTATAGAATTTTGAGTACTGATCAGGATAATGTTTCGGTAGAATTTTTAAAA GATGGGAAGTATGAAATAAAAAATATGATTTGGCATGATTATCATGACTCTCATCGAAATGAATTTAAAAAAGGCGCTGT AAAACCAAAGGAAAAGTTTAAGCTTTTGGATAATAATGTCGGCTACGTAAATATGGGAGCTATAAAACCTAAAAATATTC CAGACATGATTGATGCCTTAAAATCTACAAAGGCAATCGTTTTTGATATGAGAAATTATCCAAATGGAACCTGGAAAGAG ATCTCGGATTTTTTAAATGCTGAGGAAAAGAAATTTTGCGATTATACAGAACCTTATTTAAACTACCCGGGAAAATACAA ATGGGTAGATGGACGAAAATGCGGATTTAATAATAAAGATAATTATAAAGGGAAAGCGATTGTACTGCTAAATGAAAAGT CACTAAGCCAGTCAGAATGGACAGCAATGTGTTTTCAAACAGCAGGAAATACAACAATTATAGGCAGTCAAACAGCAGGA ACAGATGGAAATGCAGTAGATCTTGATTTTAAAGGATTTCATACCAGATATACAGGACTTGGGGTTTATTATCCAGACCG CAGAGAAGCCCAGCGTATAGGAATTGTACCAGATATTGAAGTAAAACCAACCATAAAAGGGATTCAGGAAGGAAAAGATG AGGTCTTAGATCGTGCTTTGCTGTTTATTGAAACAGGAAAGTAA
Upstream 100 bases:
>100_bases TACGGAAAACCTCAATCGAATTTGGAATTTTAATTCTAAATTCGATTTTCTATTTTACAGCATTAACCAAAAACAATCAA AACCTAACCAGTCTCAATTA
Downstream 100 bases:
>100_bases ACATTAGTTTGTCTTCATGAGAAAAGTCGAAGCATTGCATTTTGAATCGACTAAGATAAGCGATAATCTGTATTTGACTT TGACTTCACTCAGTCTGACA
Product: peptidase S41
Products: NA
Alternate protein names: S41 Family Peptidase; Peptidase; Carboxy- Processing Protease
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MKKITLFLFITFSQITFCAPKITETEKLFATCKVWGFLKYYHPKAASGEVNWDKQLLEKLPKIEKAQTKEEFSLLLENWI DDLGPVKEIAPIPAPKDVELFDKNFDLSWFNNKLFSKKLSKKLKFIEENRFQSNEDFEHGFDGLKMTKNYFDLDYNNKDS RILMLFAYWNLIEYYFPYKYIMDQKWDLSLEQSLPSIADAKNEADFYLALKKLTSKLNDSHVETPIYGPTVYRSLNHFPA AGKIIDDKLVITEILGDSLAEADNIKIGTVITKINGKTIKELIEQNRDLVCASNEAKLLDKVVYRILSTDQDNVSVEFLK DGKYEIKNMIWHDYHDSHRNEFKKGAVKPKEKFKLLDNNVGYVNMGAIKPKNIPDMIDALKSTKAIVFDMRNYPNGTWKE ISDFLNAEEKKFCDYTEPYLNYPGKYKWVDGRKCGFNNKDNYKGKAIVLLNEKSLSQSEWTAMCFQTAGNTTIIGSQTAG TDGNAVDLDFKGFHTRYTGLGVYYPDRREAQRIGIVPDIEVKPTIKGIQEGKDEVLDRALLFIETGK
Sequences:
>Translated_547_residues MKKITLFLFITFSQITFCAPKITETEKLFATCKVWGFLKYYHPKAASGEVNWDKQLLEKLPKIEKAQTKEEFSLLLENWI DDLGPVKEIAPIPAPKDVELFDKNFDLSWFNNKLFSKKLSKKLKFIEENRFQSNEDFEHGFDGLKMTKNYFDLDYNNKDS RILMLFAYWNLIEYYFPYKYIMDQKWDLSLEQSLPSIADAKNEADFYLALKKLTSKLNDSHVETPIYGPTVYRSLNHFPA AGKIIDDKLVITEILGDSLAEADNIKIGTVITKINGKTIKELIEQNRDLVCASNEAKLLDKVVYRILSTDQDNVSVEFLK DGKYEIKNMIWHDYHDSHRNEFKKGAVKPKEKFKLLDNNVGYVNMGAIKPKNIPDMIDALKSTKAIVFDMRNYPNGTWKE ISDFLNAEEKKFCDYTEPYLNYPGKYKWVDGRKCGFNNKDNYKGKAIVLLNEKSLSQSEWTAMCFQTAGNTTIIGSQTAG TDGNAVDLDFKGFHTRYTGLGVYYPDRREAQRIGIVPDIEVKPTIKGIQEGKDEVLDRALLFIETGK >Mature_547_residues MKKITLFLFITFSQITFCAPKITETEKLFATCKVWGFLKYYHPKAASGEVNWDKQLLEKLPKIEKAQTKEEFSLLLENWI DDLGPVKEIAPIPAPKDVELFDKNFDLSWFNNKLFSKKLSKKLKFIEENRFQSNEDFEHGFDGLKMTKNYFDLDYNNKDS RILMLFAYWNLIEYYFPYKYIMDQKWDLSLEQSLPSIADAKNEADFYLALKKLTSKLNDSHVETPIYGPTVYRSLNHFPA AGKIIDDKLVITEILGDSLAEADNIKIGTVITKINGKTIKELIEQNRDLVCASNEAKLLDKVVYRILSTDQDNVSVEFLK DGKYEIKNMIWHDYHDSHRNEFKKGAVKPKEKFKLLDNNVGYVNMGAIKPKNIPDMIDALKSTKAIVFDMRNYPNGTWKE ISDFLNAEEKKFCDYTEPYLNYPGKYKWVDGRKCGFNNKDNYKGKAIVLLNEKSLSQSEWTAMCFQTAGNTTIIGSQTAG TDGNAVDLDFKGFHTRYTGLGVYYPDRREAQRIGIVPDIEVKPTIKGIQEGKDEVLDRALLFIETGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63091; Mature: 63091
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKITLFLFITFSQITFCAPKITETEKLFATCKVWGFLKYYHPKAASGEVNWDKQLLEKL CCEEEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHC PKIEKAQTKEEFSLLLENWIDDLGPVKEIAPIPAPKDVELFDKNFDLSWFNNKLFSKKLS CCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHH KKLKFIEENRFQSNEDFEHGFDGLKMTKNYFDLDYNNKDSRILMLFAYWNLIEYYFPYKY HHHHHHHHHCCCCCCCHHHCCCCHHCCCCEEECCCCCCCCEEEEEHHHHHHHHHHCCHHH IMDQKWDLSLEQSLPSIADAKNEADFYLALKKLTSKLNDSHVETPIYGPTVYRSLNHFPA CCCCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC AGKIIDDKLVITEILGDSLAEADNIKIGTVITKINGKTIKELIEQNRDLVCASNEAKLLD CCCEECCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHCCCCEEEECCHHHHHH KVVYRILSTDQDNVSVEFLKDGKYEIKNMIWHDYHDSHRNEFKKGAVKPKEKFKLLDNNV HHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCC GYVNMGAIKPKNIPDMIDALKSTKAIVFDMRNYPNGTWKEISDFLNAEEKKFCDYTEPYL CEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCHHHHCCCCCCHHH NYPGKYKWVDGRKCGFNNKDNYKGKAIVLLNEKSLSQSEWTAMCFQTAGNTTIIGSQTAG CCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHEECCCCEEEEECCCCC TDGNAVDLDFKGFHTRYTGLGVYYPDRREAQRIGIVPDIEVKPTIKGIQEGKDEVLDRAL CCCCEEEEECCCCEEEEEEEEEECCCHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHEE LFIETGK EEEECCC >Mature Secondary Structure MKKITLFLFITFSQITFCAPKITETEKLFATCKVWGFLKYYHPKAASGEVNWDKQLLEKL CCEEEEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHC PKIEKAQTKEEFSLLLENWIDDLGPVKEIAPIPAPKDVELFDKNFDLSWFNNKLFSKKLS CCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHH KKLKFIEENRFQSNEDFEHGFDGLKMTKNYFDLDYNNKDSRILMLFAYWNLIEYYFPYKY HHHHHHHHHCCCCCCCHHHCCCCHHCCCCEEECCCCCCCCEEEEEHHHHHHHHHHCCHHH IMDQKWDLSLEQSLPSIADAKNEADFYLALKKLTSKLNDSHVETPIYGPTVYRSLNHFPA CCCCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC AGKIIDDKLVITEILGDSLAEADNIKIGTVITKINGKTIKELIEQNRDLVCASNEAKLLD CCCEECCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHCCCCEEEECCHHHHHH KVVYRILSTDQDNVSVEFLKDGKYEIKNMIWHDYHDSHRNEFKKGAVKPKEKFKLLDNNV HHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCC GYVNMGAIKPKNIPDMIDALKSTKAIVFDMRNYPNGTWKEISDFLNAEEKKFCDYTEPYL CEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCHHHHCCCCCCHHH NYPGKYKWVDGRKCGFNNKDNYKGKAIVLLNEKSLSQSEWTAMCFQTAGNTTIIGSQTAG CCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHEECCCCEEEEECCCCC TDGNAVDLDFKGFHTRYTGLGVYYPDRREAQRIGIVPDIEVKPTIKGIQEGKDEVLDRAL CCCCEEEEECCCCEEEEEEEEEECCCHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHEE LFIETGK EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA