| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298963
Identifier: 146298963
GI number: 146298963
Start: 1370115
End: 1370738
Strand: Direct
Name: 146298963
Synonym: Fjoh_1203
Alternate gene names: NA
Gene position: 1370115-1370738 (Clockwise)
Preceding gene: 146298962
Following gene: 146298964
Centisome position: 22.47
GC content: 25.8
Gene sequence:
>624_bases ATGATTAGTAATAACATGGAAAACGAGATTAAAATATTAAAAGATTTTGTAGAGGGAATTATAACTCCTAAAGATTTTGA AAAAGTACTGTTTGAAAATACAAAATTACAAGAACTGCTTTTAGATGATACTTTAAAGTTGCAAAATACATATATAGGAA ATTCGACAATATTTTTATATTTAGTTGAACAAAAAATACAAAGTATAGGAGGTCAATTGAATGCGCAAGGGGCTGTACAA TTGTTTTTGACCAAAAAGGGAATTAGTTTTAAAAAGTATGAGAAATATAGTGATGATTATGGTCTTATATTAGATTCTCA ACCAAAATATATTAATACAGATTTAGATTTTATTGAAAAGTATATTTTACCAGCAGAAGCAAATAAATCTAAATCAGAAT TTAAAAAAGAGATGAAAGATCGATTTTCAGCTTTATTTAAATATCAAACGAAACCACCAAAATGGATTCAAAGCCCAAAT TGGATTATTAAAAATAATAAACCTCTTTTCTTTTTAGGTCAATTTGAAATTAAGAATTGTGATATTTTTCATGATGATGG AGCAGTTTATTTATTTGTAGATGAGAAAACGGGTGAAATTGAAACGGTGAAACAGTTCTATTAA
Upstream 100 bases:
>100_bases AAGCCTTTTTTTTTGTTATAAAATGTCTTAAACTTTTGTTTTTAAAACTTTTAAAGGATGTTTTTACTTTTAGAGAAATG TACATTTGCAACATTATTAA
Downstream 100 bases:
>100_bases AAATTAAGGTTTATTTATCTTTCGTTTAAGTAAATTCTTAGAACTAAAAAGTTTTCTTTGAGTCAAATTTTCAAAGATAA CTTTTATGCAAAATCACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MISNNMENEIKILKDFVEGIITPKDFEKVLFENTKLQELLLDDTLKLQNTYIGNSTIFLYLVEQKIQSIGGQLNAQGAVQ LFLTKKGISFKKYEKYSDDYGLILDSQPKYINTDLDFIEKYILPAEANKSKSEFKKEMKDRFSALFKYQTKPPKWIQSPN WIIKNNKPLFFLGQFEIKNCDIFHDDGAVYLFVDEKTGEIETVKQFY
Sequences:
>Translated_207_residues MISNNMENEIKILKDFVEGIITPKDFEKVLFENTKLQELLLDDTLKLQNTYIGNSTIFLYLVEQKIQSIGGQLNAQGAVQ LFLTKKGISFKKYEKYSDDYGLILDSQPKYINTDLDFIEKYILPAEANKSKSEFKKEMKDRFSALFKYQTKPPKWIQSPN WIIKNNKPLFFLGQFEIKNCDIFHDDGAVYLFVDEKTGEIETVKQFY >Mature_207_residues MISNNMENEIKILKDFVEGIITPKDFEKVLFENTKLQELLLDDTLKLQNTYIGNSTIFLYLVEQKIQSIGGQLNAQGAVQ LFLTKKGISFKKYEKYSDDYGLILDSQPKYINTDLDFIEKYILPAEANKSKSEFKKEMKDRFSALFKYQTKPPKWIQSPN WIIKNNKPLFFLGQFEIKNCDIFHDDGAVYLFVDEKTGEIETVKQFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24218; Mature: 24218
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISNNMENEIKILKDFVEGIITPKDFEKVLFENTKLQELLLDDTLKLQNTYIGNSTIFLY CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCEEEEE LVEQKIQSIGGQLNAQGAVQLFLTKKGISFKKYEKYSDDYGLILDSQPKYINTDLDFIEK EHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHCCCCCCEEEECCCCCEECCCHHHHHH YILPAEANKSKSEFKKEMKDRFSALFKYQTKPPKWIQSPNWIIKNNKPLFFLGQFEIKNC HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEECCCCEEEEEEEEECCC DIFHDDGAVYLFVDEKTGEIETVKQFY EEEECCCEEEEEEECCCCCHHHHHHCC >Mature Secondary Structure MISNNMENEIKILKDFVEGIITPKDFEKVLFENTKLQELLLDDTLKLQNTYIGNSTIFLY CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCEEEEE LVEQKIQSIGGQLNAQGAVQLFLTKKGISFKKYEKYSDDYGLILDSQPKYINTDLDFIEK EHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHCCCCCCEEEECCCCCEECCCHHHHHH YILPAEANKSKSEFKKEMKDRFSALFKYQTKPPKWIQSPNWIIKNNKPLFFLGQFEIKNC HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEECCCCEEEEEEEEECCC DIFHDDGAVYLFVDEKTGEIETVKQFY EEEECCCEEEEEEECCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA