| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298961
Identifier: 146298961
GI number: 146298961
Start: 1366004
End: 1366612
Strand: Direct
Name: 146298961
Synonym: Fjoh_1201
Alternate gene names: NA
Gene position: 1366004-1366612 (Clockwise)
Preceding gene: 146298957
Following gene: 146298962
Centisome position: 22.4
GC content: 30.87
Gene sequence:
>609_bases ATGAAATATAAAATAGCGCTGTTTTTACTTTTGATTTTTGCACTTCAATCCTGTCAGGATGAGAATCAAAAACGTCTTGC TGAAAATGCGAAAGAAGCTAAAAAAAATGCTAAGATTTTTAACAATATAAATAAAGCCTGGATTTTTATTGATGAACCTA TTAATGAGGTTTCAGAACAAAATATAAAAACCTGGACAGAATGGCGCGATTTTATAAAAGAAATTGGAGATAAACCCAGA AAAACAATAGGGGCATTTCAGAAAAAATCTACTGCTATTTCAAAAAAAGCAATGGCTTTAAACAATAGCATTCCAAACGA ATTTAATCAGCCGGCAATTAAAAGCCGAATTTCAGTTTTGATTACCAAAATTAAAATGATGGATTTGTTTATTCATTTAA GCCAGATTCCAGATGATAAAGTTGCTTTTTTAATTGGCGAAATTAATAAAGAACTTGTCTCTTTAGAAAGACAAATGGAT AAAATTGTAGAGAGAAGTAAAGTTCCAAAAGAACAGGGAGAAGAAGATTTTCTTAAAATGTTAGACACAACACGCGCTAT TCCAAACGCATCAGTACCAATAGATCCAAATTTACCAAGAGTTGAGTAA
Upstream 100 bases:
>100_bases GTGACAAAAAAATAACCTTGATTTATAGAATCTTTAGCAAAAAACACAATTCGTAATTGTAAATTTACTTTGTAACTTTG CGGTCTAACATTATTATCAA
Downstream 100 bases:
>100_bases AAACGTATTATATACAACATACGATAATCTGCCAAAAGCACAGCAGATTGCATCAGGTTTATTAGAAGGGAATCAGATAA AAATGAATATCAGCGGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKYKIALFLLLIFALQSCQDENQKRLAENAKEAKKNAKIFNNINKAWIFIDEPINEVSEQNIKTWTEWRDFIKEIGDKPR KTIGAFQKKSTAISKKAMALNNSIPNEFNQPAIKSRISVLITKIKMMDLFIHLSQIPDDKVAFLIGEINKELVSLERQMD KIVERSKVPKEQGEEDFLKMLDTTRAIPNASVPIDPNLPRVE
Sequences:
>Translated_202_residues MKYKIALFLLLIFALQSCQDENQKRLAENAKEAKKNAKIFNNINKAWIFIDEPINEVSEQNIKTWTEWRDFIKEIGDKPR KTIGAFQKKSTAISKKAMALNNSIPNEFNQPAIKSRISVLITKIKMMDLFIHLSQIPDDKVAFLIGEINKELVSLERQMD KIVERSKVPKEQGEEDFLKMLDTTRAIPNASVPIDPNLPRVE >Mature_202_residues MKYKIALFLLLIFALQSCQDENQKRLAENAKEAKKNAKIFNNINKAWIFIDEPINEVSEQNIKTWTEWRDFIKEIGDKPR KTIGAFQKKSTAISKKAMALNNSIPNEFNQPAIKSRISVLITKIKMMDLFIHLSQIPDDKVAFLIGEINKELVSLERQMD KIVERSKVPKEQGEEDFLKMLDTTRAIPNASVPIDPNLPRVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23269; Mature: 23269
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKIALFLLLIFALQSCQDENQKRLAENAKEAKKNAKIFNNINKAWIFIDEPINEVSEQ CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH NIKTWTEWRDFIKEIGDKPRKTIGAFQKKSTAISKKAMALNNSIPNEFNQPAIKSRISVL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH ITKIKMMDLFIHLSQIPDDKVAFLIGEINKELVSLERQMDKIVERSKVPKEQGEEDFLKM HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LDTTRAIPNASVPIDPNLPRVE HHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKYKIALFLLLIFALQSCQDENQKRLAENAKEAKKNAKIFNNINKAWIFIDEPINEVSEQ CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH NIKTWTEWRDFIKEIGDKPRKTIGAFQKKSTAISKKAMALNNSIPNEFNQPAIKSRISVL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH ITKIKMMDLFIHLSQIPDDKVAFLIGEINKELVSLERQMDKIVERSKVPKEQGEEDFLKM HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LDTTRAIPNASVPIDPNLPRVE HHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA