| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is wprA [H]
Identifier: 146298950
GI number: 146298950
Start: 1349849
End: 1351483
Strand: Direct
Name: wprA [H]
Synonym: Fjoh_1190
Alternate gene names: 146298950
Gene position: 1349849-1351483 (Clockwise)
Preceding gene: 146298947
Following gene: 146298951
Centisome position: 22.14
GC content: 36.02
Gene sequence:
>1635_bases ATGAGTCATATAAAACCTCTTAAATTATCTGCTTTTGCATTGCTTGTTTTAGCAGGATGCAGCGCTACGGTACAAGCGCA AGTTTCTACTCAAAAAGAGTTTATTAAAGCGCCTGCGGCGATTGTTAAAAAAGCGCCTGTAAGCGAAAATGAATTAAAAA GATGGAGTCACCTTGATTTATTAAAAGATTCTATTCCGGGGATGAGTGTTGATAAAGCTTACGCTGAATTACTACAAGGA AAAAAAGGACAAAAAGTAATCGTAGGAATTGTAGACTCTGGTGTTGATATCGAACACGAAGATCTAAAAGGAATGATCTG GACAAATCCTAAAGAAATTCCTGGTAACGGAATTGACGATGATAAAAACGGATTTATTGATGACGTAAACGGCTGGAACT TTCTTGGAGATGCTGTTCACGAAAATCTGGAGTTAACACGTATCGTTAAAAAAGGAGACGACGGTTCAGCACAATATAAA GCTGCCCTTGCTCAATATACTGAAAAATACGAAGAAGCTTTGCAGGATAAACAACAAGTAGATTTTTTACTTGATGTGCA CAATACAATCAAAAAAGAGCTTAACAAAACGACTTATAAGTTAGAAGACTTAAGCACCATTACTTCGGCAGATCCAAAAG TTCTGCAAAGTAAAAAAGTAATGACGCAGATTTTTACAAACGCAGGTTCAACTTTTGACCCTGAGTCTGAACTAAAAGAA TATGGCGAGCAGGTTTACGATCAGTTAAATTACAATTTAAATAAAGAATTTGACGGAAGAAAAATCGTAGGCGATAATCC TGAAGATATTAAAAACACTCGTTATGGAAATAACATCGTTTTTGGTCCAGACAAAGAAAAAGCACTTCACGGAACACACG TAGCCGGAATTATTGCGCAAATTCGCGGTAATAATTTAGGAGGAGACGGAGTAACAAATAATGTTGAAATTTTAACAGTA AGAGCTGTTCCGGATGGAGATGAATATGATAAAGATATCGCTTTAGCAATTCGTTATGCAGTTGACAACGGCGCAAAAGT AATCAACGGTAGTTTTGGAAAAAGCTTCTCTCCGCACAAACAATGGGTTTACGATGCTATCAAATATGCAGCAAAAAAAG ATGTTTTAATCGTTCACGCAGCAGGAAATGACGGATACAATATTGATGAAACAAAAAACATCAACTATCCAAATGACTCT GAAGATAACGTAAAAGAATTTGCTGATAACGTAATCACAATTGGAGCAATTAATAAACAATACGGAGAAAATGTTGTAGC AGGATTTTCTAACTTCGGAAAAATTAACGTTGACGTTTTTGCTCCGGGAGAAGAAATCTATGCAACAGTTCCAAACAACA AATACAAGTTTTTACAAGGAACATCAATGGCATCTCCAAATGCAGCAGGTGTTGCAGCATTGATTCGTTCTTACTATCCA AAATTAAAAGCGTCTCAGGTAAAACATATTTTAATGGATTCAGGAGTTGCACTTCCTGCACAAATTGTTTTAGGTAAAGG TGAAAATCCAGGTGAGAAACCTGCAGCAGTATCTTCTGCAGAATCATCAAAAACAGCTAAAATGGTAAACGCTTACAATG CTTTATTAATGGCAGAGAAAATGTCTAAAAAATAA
Upstream 100 bases:
>100_bases TTTAATCAAAATTTCATAACACAGTGTTAACAGTTAGTTTTTTGTAACAAAAAAGCATAATTTAGACCCATCTTTTAACT TTACAATTATAATTAGATAC
Downstream 100 bases:
>100_bases AGAATAATACACTATTAATCTAATGGAAGAGTTCGCACTCTTCCATTTTCTATTACATATAAACATGCGAAAAATTATCT TATTGTCATTTCTGAGTTTG
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: CWBP23; CWBP52 [H]
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
>544_residues MSHIKPLKLSAFALLVLAGCSATVQAQVSTQKEFIKAPAAIVKKAPVSENELKRWSHLDLLKDSIPGMSVDKAYAELLQG KKGQKVIVGIVDSGVDIEHEDLKGMIWTNPKEIPGNGIDDDKNGFIDDVNGWNFLGDAVHENLELTRIVKKGDDGSAQYK AALAQYTEKYEEALQDKQQVDFLLDVHNTIKKELNKTTYKLEDLSTITSADPKVLQSKKVMTQIFTNAGSTFDPESELKE YGEQVYDQLNYNLNKEFDGRKIVGDNPEDIKNTRYGNNIVFGPDKEKALHGTHVAGIIAQIRGNNLGGDGVTNNVEILTV RAVPDGDEYDKDIALAIRYAVDNGAKVINGSFGKSFSPHKQWVYDAIKYAAKKDVLIVHAAGNDGYNIDETKNINYPNDS EDNVKEFADNVITIGAINKQYGENVVAGFSNFGKINVDVFAPGEEIYATVPNNKYKFLQGTSMASPNAAGVAALIRSYYP KLKASQVKHILMDSGVALPAQIVLGKGENPGEKPAAVSSAESSKTAKMVNAYNALLMAEKMSKK
Sequences:
>Translated_544_residues MSHIKPLKLSAFALLVLAGCSATVQAQVSTQKEFIKAPAAIVKKAPVSENELKRWSHLDLLKDSIPGMSVDKAYAELLQG KKGQKVIVGIVDSGVDIEHEDLKGMIWTNPKEIPGNGIDDDKNGFIDDVNGWNFLGDAVHENLELTRIVKKGDDGSAQYK AALAQYTEKYEEALQDKQQVDFLLDVHNTIKKELNKTTYKLEDLSTITSADPKVLQSKKVMTQIFTNAGSTFDPESELKE YGEQVYDQLNYNLNKEFDGRKIVGDNPEDIKNTRYGNNIVFGPDKEKALHGTHVAGIIAQIRGNNLGGDGVTNNVEILTV RAVPDGDEYDKDIALAIRYAVDNGAKVINGSFGKSFSPHKQWVYDAIKYAAKKDVLIVHAAGNDGYNIDETKNINYPNDS EDNVKEFADNVITIGAINKQYGENVVAGFSNFGKINVDVFAPGEEIYATVPNNKYKFLQGTSMASPNAAGVAALIRSYYP KLKASQVKHILMDSGVALPAQIVLGKGENPGEKPAAVSSAESSKTAKMVNAYNALLMAEKMSKK >Mature_543_residues SHIKPLKLSAFALLVLAGCSATVQAQVSTQKEFIKAPAAIVKKAPVSENELKRWSHLDLLKDSIPGMSVDKAYAELLQGK KGQKVIVGIVDSGVDIEHEDLKGMIWTNPKEIPGNGIDDDKNGFIDDVNGWNFLGDAVHENLELTRIVKKGDDGSAQYKA ALAQYTEKYEEALQDKQQVDFLLDVHNTIKKELNKTTYKLEDLSTITSADPKVLQSKKVMTQIFTNAGSTFDPESELKEY GEQVYDQLNYNLNKEFDGRKIVGDNPEDIKNTRYGNNIVFGPDKEKALHGTHVAGIIAQIRGNNLGGDGVTNNVEILTVR AVPDGDEYDKDIALAIRYAVDNGAKVINGSFGKSFSPHKQWVYDAIKYAAKKDVLIVHAAGNDGYNIDETKNINYPNDSE DNVKEFADNVITIGAINKQYGENVVAGFSNFGKINVDVFAPGEEIYATVPNNKYKFLQGTSMASPNAAGVAALIRSYYPK LKASQVKHILMDSGVALPAQIVLGKGENPGEKPAAVSSAESSKTAKMVNAYNALLMAEKMSKK
Specific function: CWBP52 is a serine-type protease that could be involved in proteoglycan peptide bridges [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted, cell wall. Note=Released into the medium [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 59410; Mature: 59278
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00136 SUBTILASE_ASP ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHIKPLKLSAFALLVLAGCSATVQAQVSTQKEFIKAPAAIVKKAPVSENELKRWSHLDL CCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LKDSIPGMSVDKAYAELLQGKKGQKVIVGIVDSGVDIEHEDLKGMIWTNPKEIPGNGIDD HHHCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHCCCEEECCCCCCCCCCCCC DKNGFIDDVNGWNFLGDAVHENLELTRIVKKGDDGSAQYKAALAQYTEKYEEALQDKQQV CCCCCCCCCCCCHHHHHHHHCCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DFLLDVHNTIKKELNKTTYKLEDLSTITSADPKVLQSKKVMTQIFTNAGSTFDPESELKE HHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH YGEQVYDQLNYNLNKEFDGRKIVGDNPEDIKNTRYGNNIVFGPDKEKALHGTHVAGIIAQ HHHHHHHHHCCCCCCCCCCCEECCCCHHHHHCCCCCCEEEECCCCCHHHCCHHHHHHHHH IRGNNLGGDGVTNNVEILTVRAVPDGDEYDKDIALAIRYAVDNGAKVINGSFGKSFSPHK HCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCHHH QWVYDAIKYAAKKDVLIVHAAGNDGYNIDETKNINYPNDSEDNVKEFADNVITIGAINKQ HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCHH YGENVVAGFSNFGKINVDVFAPGEEIYATVPNNKYKFLQGTSMASPNAAGVAALIRSYYP HCCHHHHHHCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHCC KLKASQVKHILMDSGVALPAQIVLGKGENPGEKPAAVSSAESSKTAKMVNAYNALLMAEK CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH MSKK HCCC >Mature Secondary Structure SHIKPLKLSAFALLVLAGCSATVQAQVSTQKEFIKAPAAIVKKAPVSENELKRWSHLDL CCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LKDSIPGMSVDKAYAELLQGKKGQKVIVGIVDSGVDIEHEDLKGMIWTNPKEIPGNGIDD HHHCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHCCCEEECCCCCCCCCCCCC DKNGFIDDVNGWNFLGDAVHENLELTRIVKKGDDGSAQYKAALAQYTEKYEEALQDKQQV CCCCCCCCCCCCHHHHHHHHCCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DFLLDVHNTIKKELNKTTYKLEDLSTITSADPKVLQSKKVMTQIFTNAGSTFDPESELKE HHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH YGEQVYDQLNYNLNKEFDGRKIVGDNPEDIKNTRYGNNIVFGPDKEKALHGTHVAGIIAQ HHHHHHHHHCCCCCCCCCCCEECCCCHHHHHCCCCCCEEEECCCCCHHHCCHHHHHHHHH IRGNNLGGDGVTNNVEILTVRAVPDGDEYDKDIALAIRYAVDNGAKVINGSFGKSFSPHK HCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCHHH QWVYDAIKYAAKKDVLIVHAAGNDGYNIDETKNINYPNDSEDNVKEFADNVITIGAINKQ HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCHH YGENVVAGFSNFGKINVDVFAPGEEIYATVPNNKYKFLQGTSMASPNAAGVAALIRSYYP HCCHHHHHHCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHCC KLKASQVKHILMDSGVALPAQIVLGKGENPGEKPAAVSSAESSKTAKMVNAYNALLMAEK CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH MSKK HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9004506; 9353931; 9384377; 10658653 [H]