| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298871
Identifier: 146298871
GI number: 146298871
Start: 1252127
End: 1253377
Strand: Direct
Name: 146298871
Synonym: Fjoh_1110
Alternate gene names: NA
Gene position: 1252127-1253377 (Clockwise)
Preceding gene: 146298834
Following gene: 146298877
Centisome position: 20.54
GC content: 36.77
Gene sequence:
>1251_bases ATGACAAAGGAGTTTGTAGATGTTTTAGTAATAGGCGCCGGACCGTCCGGATGCGTATCAGCATCGTATCTTCATAAAAA TAATGTTAAGGTAAAAGTTGTAGAAAAACAAAAGTTCCCGAGACTCGTTGTTGGCGAAAGCTTAATTCCGAGAGTAATGG ATCATTTTGCTGAGGCAGAATTGTTTGAGGCTCTAGATGCAATGAATTTTGAAAAAAAATTGGGAGCCCGTTTCATTAGA GGTGAAGAAATTTGTGTTTTTGATTTCAGCAAAAAATTTGGCGAAGGCTGGGACTGGACCTGGCAGGTTCCTCGTGCAGA TTTTGACAATACAATGGCTCAGGAAGTCGTTAGAAAAGGTGTTGATCTGGAATTTGAAACCGAAGTTCTTGAAGTTTCTT TTGAAGGAAAAAAATCAAAAACAATCGTAAAAGATAAAGATGGAAATCTAAAAGAAATTCACGCCAATTTTATTATCGAC TCAAGCGGTTATGGACGTGTACTGCCAAGACTTTTAGATTTAGATACACCTTCGAAATTAGATCCGCATTCTTCTATTTT TACGCACGTAAAAGATATTAATAGAGAAGAAGGGGAAGAAGGAACTCAAATTTCATTTGATATCCTGGAAACTGAAGTTT GGCTTTGGGTAATTCCGTTTTCTAATGGAAACACGAGTTTAGGTGTGGTTGGACCAACAGATTTTATCAATTCTCTTTCT GAAAATAAAGACAATGCCGAGGCTTTGAAAAATGCAATTCAAAAATCGGATTATTATATTAAAAGATTTGCCGGAACAGA ATTTCTGTTTGAACCGGTTAAATTAGAAAACTACTCAAGAGCGGTAAAAAGAATGTACGGTGACGGTTTTGCTTTAACCG GAAACAGTTCTGAGTTTTTAGATCCGGTTTTTTCATCTGGTGTAGCTTTTGCAACTGAATCTGGAATGCTTGCGGCAAAA TTATATTTAAAAGAATCACAGGGAATTCCTGTTGACTGGGAAGTTGAGTTTACACAGTATATGAAACGAGGTATCGCAGT TTTCACAACTTATGTACAGGAGTGGTATACAGGAAATCTGCAAACGTTGTTTTTCCATCAGCCGGAAAATCCAGACGTAA AAGAAAAAATATGCGCTGTTTTAGCAGGGTATGTCTGGAATGAAGAAAATTCGTTTGTCAAGAAACACGATCACGTAATA GCCAATATGGCATATTTACTAAATATGCAAAAAGAACAAAGCCCTGAATAA
Upstream 100 bases:
>100_bases AAATCGGTTTTGATTGTGCTAATTTAATTTTATTTATCAAAATAAATGTAGTTATTTTGATGATGGCAAATGTAGGTTAA TAATTGATAATATTCTTATT
Downstream 100 bases:
>100_bases TTAGGGCTTTTTCTATTAAAAGAATAATTTTTATTTCGAGATTCATTCCGTAGGAATGTTTCGTTGGTAGTAGAATGAAA TTTGAATTACGGTTATACGT
Product: tryptophan halogenase
Products: NA
Alternate protein names: Oxidoreductase Protein; FAD Dependent Oxidoreductase; Oxidoreductase; Dehydrogenase; Halogenase; FADH2 Dependent Halogenase; Pyridine Nucleotide-Disulfide Oxidoreductase; Hydroxylase; Alkylhalidase PltA; Dehyrogenase; Oxidoreductase Transmembrane Protein; Alkylhalidase CmlS; LOW QUALITY PROTEIN Dehydrogenase; Monooxygenase; Dehydrogenases; Flavoprotein/Dehydrogenase; Dehydrogenase/Oxidoreductase; FAD Oxidoreductase; Alkylhalidase; LOW QUALITY PROTEIN Oxidoreductase
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MTKEFVDVLVIGAGPSGCVSASYLHKNNVKVKVVEKQKFPRLVVGESLIPRVMDHFAEAELFEALDAMNFEKKLGARFIR GEEICVFDFSKKFGEGWDWTWQVPRADFDNTMAQEVVRKGVDLEFETEVLEVSFEGKKSKTIVKDKDGNLKEIHANFIID SSGYGRVLPRLLDLDTPSKLDPHSSIFTHVKDINREEGEEGTQISFDILETEVWLWVIPFSNGNTSLGVVGPTDFINSLS ENKDNAEALKNAIQKSDYYIKRFAGTEFLFEPVKLENYSRAVKRMYGDGFALTGNSSEFLDPVFSSGVAFATESGMLAAK LYLKESQGIPVDWEVEFTQYMKRGIAVFTTYVQEWYTGNLQTLFFHQPENPDVKEKICAVLAGYVWNEENSFVKKHDHVI ANMAYLLNMQKEQSPE
Sequences:
>Translated_416_residues MTKEFVDVLVIGAGPSGCVSASYLHKNNVKVKVVEKQKFPRLVVGESLIPRVMDHFAEAELFEALDAMNFEKKLGARFIR GEEICVFDFSKKFGEGWDWTWQVPRADFDNTMAQEVVRKGVDLEFETEVLEVSFEGKKSKTIVKDKDGNLKEIHANFIID SSGYGRVLPRLLDLDTPSKLDPHSSIFTHVKDINREEGEEGTQISFDILETEVWLWVIPFSNGNTSLGVVGPTDFINSLS ENKDNAEALKNAIQKSDYYIKRFAGTEFLFEPVKLENYSRAVKRMYGDGFALTGNSSEFLDPVFSSGVAFATESGMLAAK LYLKESQGIPVDWEVEFTQYMKRGIAVFTTYVQEWYTGNLQTLFFHQPENPDVKEKICAVLAGYVWNEENSFVKKHDHVI ANMAYLLNMQKEQSPE >Mature_415_residues TKEFVDVLVIGAGPSGCVSASYLHKNNVKVKVVEKQKFPRLVVGESLIPRVMDHFAEAELFEALDAMNFEKKLGARFIRG EEICVFDFSKKFGEGWDWTWQVPRADFDNTMAQEVVRKGVDLEFETEVLEVSFEGKKSKTIVKDKDGNLKEIHANFIIDS SGYGRVLPRLLDLDTPSKLDPHSSIFTHVKDINREEGEEGTQISFDILETEVWLWVIPFSNGNTSLGVVGPTDFINSLSE NKDNAEALKNAIQKSDYYIKRFAGTEFLFEPVKLENYSRAVKRMYGDGFALTGNSSEFLDPVFSSGVAFATESGMLAAKL YLKESQGIPVDWEVEFTQYMKRGIAVFTTYVQEWYTGNLQTLFFHQPENPDVKEKICAVLAGYVWNEENSFVKKHDHVIA NMAYLLNMQKEQSPE
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47197; Mature: 47066
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKEFVDVLVIGAGPSGCVSASYLHKNNVKVKVVEKQKFPRLVVGESLIPRVMDHFAEAE CCCCEEEEEEECCCCCCCCEEHEEECCCCEEEEEECCCCCEEHHCHHHHHHHHHHHHHHH LFEALDAMNFEKKLGARFIRGEEICVFDFSKKFGEGWDWTWQVPRADFDNTMAQEVVRKG HHHHHHHCCHHHHHHHHEECCCEEEEEECHHHHCCCCCEEEECCCCCCCHHHHHHHHHCC VDLEFETEVLEVSFEGKKSKTIVKDKDGNLKEIHANFIIDSSGYGRVLPRLLDLDTPSKL CCCEEECEEEEEEECCCCCCEEEECCCCCCEEEEEEEEEECCCCHHHHHHHHCCCCCCCC DPHSSIFTHVKDINREEGEEGTQISFDILETEVWLWVIPFSNGNTSLGVVGPTDFINSLS CCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCEEEEECCHHHHHHHH ENKDNAEALKNAIQKSDYYIKRFAGTEFLFEPVKLENYSRAVKRMYGDGFALTGNSSEFL CCCCHHHHHHHHHHHCCHHEEECCCCHHHCCCCCHHHHHHHHHHHHCCCEEEECCCHHHH DPVFSSGVAFATESGMLAAKLYLKESQGIPVDWEVEFTQYMKRGIAVFTTYVQEWYTGNL HHHHHCCEEEEECCCCEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCE QTLFFHQPENPDVKEKICAVLAGYVWNEENSFVKKHDHVIANMAYLLNMQKEQSPE EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure TKEFVDVLVIGAGPSGCVSASYLHKNNVKVKVVEKQKFPRLVVGESLIPRVMDHFAEAE CCCEEEEEEECCCCCCCCEEHEEECCCCEEEEEECCCCCEEHHCHHHHHHHHHHHHHHH LFEALDAMNFEKKLGARFIRGEEICVFDFSKKFGEGWDWTWQVPRADFDNTMAQEVVRKG HHHHHHHCCHHHHHHHHEECCCEEEEEECHHHHCCCCCEEEECCCCCCCHHHHHHHHHCC VDLEFETEVLEVSFEGKKSKTIVKDKDGNLKEIHANFIIDSSGYGRVLPRLLDLDTPSKL CCCEEECEEEEEEECCCCCCEEEECCCCCCEEEEEEEEEECCCCHHHHHHHHCCCCCCCC DPHSSIFTHVKDINREEGEEGTQISFDILETEVWLWVIPFSNGNTSLGVVGPTDFINSLS CCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCEEEEECCHHHHHHHH ENKDNAEALKNAIQKSDYYIKRFAGTEFLFEPVKLENYSRAVKRMYGDGFALTGNSSEFL CCCCHHHHHHHHHHHCCHHEEECCCCHHHCCCCCHHHHHHHHHHHHCCCEEEECCCHHHH DPVFSSGVAFATESGMLAAKLYLKESQGIPVDWEVEFTQYMKRGIAVFTTYVQEWYTGNL HHHHHCCEEEEECCCCEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCE QTLFFHQPENPDVKEKICAVLAGYVWNEENSFVKKHDHVIANMAYLLNMQKEQSPE EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA