Click here to switch to the map view.

The map label for this gene is yfbG [C]

Identifier: 146298798

GI number: 146298798

Start: 1181054

End: 1182037

Strand: Direct

Name: yfbG [C]

Synonym: Fjoh_1037

Alternate gene names: 146298798

Gene position: 1181054-1182037 (Clockwise)

Preceding gene: 146298797

Following gene: 146298802

Centisome position: 19.37

GC content: 35.98

Gene sequence:

>984_bases
ATGAAAAGAATACTTATTACTGGAGCGGCAGGATTTTTAGGATCGCATTTATGTGACAGATTTATCAAAGAAGGATATTT
TGTTATTGGGATGGATAACCTGATTACAGGTGACCTTAAAAATATTGAGCATTTATTCAAATTAGAAAATTTTGAATTTT
ATCATCATGATATCACCAAGTTCGTTCATATTCCTGGCGATCTTGATTATATATTGCATTTTGCTTCACCGGCGAGTCCT
ATTGATTATTTAAAAATTCCAATTCAGACACTTAAGGTTGGATCTCTGGGAACGCATAATTTATTAGGATTGGCAAGAGT
AAAAAAAGCTAGAATCTTGATTGCTTCAACTTCAGAAGTTTATGGAGATCCGTTGGTGCATCCACAGACAGAAGAATATT
ATGGAAACGTAAATACAATTGGTCCTCGCGGTGTTTATGACGAAGCAAAACGTTTTCAGGAATCAATTACTATGGCATAC
CATACTTTTCATGGTGTAGAGACCAGAATAGTGCGTATTTTTAATACTTACGGACCAAGAATGCGATTAAACGACGGACG
CGTAATTCCTGCTTTTATTGGGCAAGCGTTACGAGGCGAAGATTTAACGATTTTTGGCGATGGAATGCAGACACGTTCTT
TTTGCTATGTAGACGATCAGGTTGAAGGTATTTACAGATTACTACATTCAGATTATGTTTATCCGGTAAACATTGGAAAT
CCGGACGAAATCACAATCAAAGATTTTGCAGAAGAAATTATTAAATTGACTGGAACAAATCAAAAGGTAGTATATCATCC
GCTGCCAATAAACGATCCATTACAGCGTCAGCCCGATACCACAAAAGCAAAGGAATTATTAGGCTGGGAAGCAAAAGTAA
GCCGTGCCGAAGGAATGAAAATTACCTATGAGTATTTTAAATCACTTTCTCCGGAAGAACTGGCAAAAGAAGAACATAAA
GATTTTTCGAGTTACATTAAATAA

Upstream 100 bases:

>100_bases
ATATAAAGAACATCAACAGTTGTTGAATAAAGATAATTTGAAATTATAACCGAAAAATAATTTTCAAATCAGTTACATTT
GCGATGTATAAACAATTATC

Downstream 100 bases:

>100_bases
TAAAAAAGGGAAAATATTTCTATAATATTCTCCCTTTTTCTTTTTTATTCAATTTTATTAAAAGGCATTATTTTCAATTA
ATTTCTTCATTTGTTCATCA

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKRILITGAAGFLGSHLCDRFIKEGYFVIGMDNLITGDLKNIEHLFKLENFEFYHHDITKFVHIPGDLDYILHFASPASP
IDYLKIPIQTLKVGSLGTHNLLGLARVKKARILIASTSEVYGDPLVHPQTEEYYGNVNTIGPRGVYDEAKRFQESITMAY
HTFHGVETRIVRIFNTYGPRMRLNDGRVIPAFIGQALRGEDLTIFGDGMQTRSFCYVDDQVEGIYRLLHSDYVYPVNIGN
PDEITIKDFAEEIIKLTGTNQKVVYHPLPINDPLQRQPDTTKAKELLGWEAKVSRAEGMKITYEYFKSLSPEELAKEEHK
DFSSYIK

Sequences:

>Translated_327_residues
MKRILITGAAGFLGSHLCDRFIKEGYFVIGMDNLITGDLKNIEHLFKLENFEFYHHDITKFVHIPGDLDYILHFASPASP
IDYLKIPIQTLKVGSLGTHNLLGLARVKKARILIASTSEVYGDPLVHPQTEEYYGNVNTIGPRGVYDEAKRFQESITMAY
HTFHGVETRIVRIFNTYGPRMRLNDGRVIPAFIGQALRGEDLTIFGDGMQTRSFCYVDDQVEGIYRLLHSDYVYPVNIGN
PDEITIKDFAEEIIKLTGTNQKVVYHPLPINDPLQRQPDTTKAKELLGWEAKVSRAEGMKITYEYFKSLSPEELAKEEHK
DFSSYIK
>Mature_327_residues
MKRILITGAAGFLGSHLCDRFIKEGYFVIGMDNLITGDLKNIEHLFKLENFEFYHHDITKFVHIPGDLDYILHFASPASP
IDYLKIPIQTLKVGSLGTHNLLGLARVKKARILIASTSEVYGDPLVHPQTEEYYGNVNTIGPRGVYDEAKRFQESITMAY
HTFHGVETRIVRIFNTYGPRMRLNDGRVIPAFIGQALRGEDLTIFGDGMQTRSFCYVDDQVEGIYRLLHSDYVYPVNIGN
PDEITIKDFAEEIIKLTGTNQKVVYHPLPINDPLQRQPDTTKAKELLGWEAKVSRAEGMKITYEYFKSLSPEELAKEEHK
DFSSYIK

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=306, Percent_Identity=51.6339869281046, Blast_Score=327, Evalue=1e-89,
Organism=Homo sapiens, GI7657641, Length=324, Percent_Identity=29.6296296296296, Blast_Score=113, Evalue=2e-25,
Organism=Escherichia coli, GI1788589, Length=347, Percent_Identity=25.9365994236311, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI48994969, Length=348, Percent_Identity=27.5862068965517, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788353, Length=341, Percent_Identity=26.6862170087977, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786974, Length=339, Percent_Identity=24.4837758112094, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17539532, Length=310, Percent_Identity=51.2903225806452, Blast_Score=317, Evalue=4e-87,
Organism=Caenorhabditis elegans, GI115532424, Length=323, Percent_Identity=27.8637770897833, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17568069, Length=332, Percent_Identity=25.6024096385542, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI133901786, Length=344, Percent_Identity=25, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI133901788, Length=344, Percent_Identity=25, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17539422, Length=341, Percent_Identity=24.633431085044, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI133901790, Length=343, Percent_Identity=24.7813411078717, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17539424, Length=343, Percent_Identity=24.7813411078717, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21356223, Length=323, Percent_Identity=51.3931888544892, Blast_Score=328, Evalue=2e-90,
Organism=Drosophila melanogaster, GI19923002, Length=354, Percent_Identity=24.5762711864407, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 37281; Mature: 37281

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILITGAAGFLGSHLCDRFIKEGYFVIGMDNLITGDLKNIEHLFKLENFEFYHHDITK
CCEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCEEHHHCCEE
FVHIPGDLDYILHFASPASPIDYLKIPIQTLKVGSLGTHNLLGLARVKKARILIASTSEV
EEECCCCHHHHEEECCCCCCCHHEECCHHHEEECCCCCCHHHHHHHHHEEEEEEEECHHH
YGDPLVHPQTEEYYGNVNTIGPRGVYDEAKRFQESITMAYHTFHGVETRIVRIFNTYGPR
CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHEEECCCCCE
MRLNDGRVIPAFIGQALRGEDLTIFGDGMQTRSFCYVDDQVEGIYRLLHSDYVYPVNIGN
EEECCCEEEHHHHHHHHCCCCEEEEECCCCCCEEEEECHHHHHHHHHHHCCCEEEEECCC
PDEITIKDFAEEIIKLTGTNQKVVYHPLPINDPLQRQPDTTKAKELLGWEAKVSRAEGMK
CCEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCE
ITYEYFKSLSPEELAKEEHKDFSSYIK
EEHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRILITGAAGFLGSHLCDRFIKEGYFVIGMDNLITGDLKNIEHLFKLENFEFYHHDITK
CCEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCEEHHHCCEE
FVHIPGDLDYILHFASPASPIDYLKIPIQTLKVGSLGTHNLLGLARVKKARILIASTSEV
EEECCCCHHHHEEECCCCCCCHHEECCHHHEEECCCCCCHHHHHHHHHEEEEEEEECHHH
YGDPLVHPQTEEYYGNVNTIGPRGVYDEAKRFQESITMAYHTFHGVETRIVRIFNTYGPR
CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHEEECCCCCE
MRLNDGRVIPAFIGQALRGEDLTIFGDGMQTRSFCYVDDQVEGIYRLLHSDYVYPVNIGN
EEECCCEEEHHHHHHHHCCCCEEEEECCCCCCEEEEECHHHHHHHHHHHCCCEEEEECCC
PDEITIKDFAEEIIKLTGTNQKVVYHPLPINDPLQRQPDTTKAKELLGWEAKVSRAEGMK
CCEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCE
ITYEYFKSLSPEELAKEEHKDFSSYIK
EEHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]