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The map label for this gene is recA [H]

Identifier: 146298749

GI number: 146298749

Start: 1126570

End: 1127577

Strand: Direct

Name: recA [H]

Synonym: Fjoh_0988

Alternate gene names: 146298749

Gene position: 1126570-1127577 (Clockwise)

Preceding gene: 146298748

Following gene: 146298751

Centisome position: 18.48

GC content: 37.1

Gene sequence:

>1008_bases
ATGAGTTCAGACAAAGAAGCCAAATTAAAAGCGTTACAACTAACGCTTGATAAACTTGACAAAACCTACGGAAAAGGAAC
CGTAATGAAAATGGGCGACAGAGCCATTGTGGAGGTAGAAACGATTTCTTCTGGCTCACTTGGTGTTGATTTAGCTCTTG
GGGTAAATGGATATCCAAAAGGAAGAATTATTGAAATATACGGGCCGGAATCATCTGGTAAAACCACATTGACATTACAT
GCTATTGCCGAAGCACAAAAAGCGGGTGGAATTGCAGCATTTATTGATGCTGAGCATGCATTTGACAGAAACTATGCTGA
AAAATTAAATGTTGATATCGAGAACTTAATTATATCACAGCCAGACAATGGTGAGCAAGCTTTAGAAATTGCCGAAAACC
TAATTCGTTCTGGAGCTATAGACATTGTTGTAATTGACTCTGTAGCTGCATTGACACCAAAAAGCGAGATTGAAGGTGAA
ATGGGAGATTCTAAAATGGGTCTTCATGCACGTTTAATGTCTCAAGCTTTAAGAAAACTTACCGGAACTATCAGTAAAAC
AAATTGTACTGTTTTCTTTATTAACCAGCTGCGTGAAAAAATTGGTGTTATGTTTGGGAATCCTGAAACAACAACCGGAG
GTAATGCATTGAAATTCTACGCTTCTGTACGTTTAGATATTCGTCGTTCTGCTCAAATTAAAGACGGTGAAAACGTAATT
GGTAACAGAACTAAAGTAAAAATCGTTAAAAACAAAGTGGCACCGCCTTTTAAAACAGCCGAGTTCGACATTATGTACGG
AGAAGGAGTTTCTAAAACCGGTGAAATTCTTGACTTAGCGGTTGAATTTGATATCGTTAAAAAAGCAGGATCTTGGTTTA
GCTATGGCGATACAAAATTAGGTCAAGGACGTGATGCTGTAAAAGCTCTAATTAAAGATAATCCAGAATTAGCTGACGAA
TTAGAAGAAAAAATAAAAGCTCATATGAAAGAATTAGCAAACGCTTAA

Upstream 100 bases:

>100_bases
TTTTACAAATTATAAGCCTGACCTGTAAAATTTAAAAGAAGCATTTTTTTTGAATTTTAACCGGAAAGAAAAATAACAAT
TTTAGATAATTTAAGAAAAG

Downstream 100 bases:

>100_bases
TCTTTTAAAATTAATACTTTACATATAAAAACCCGGACTTATAAAAGTCCGGGTTTTTTATTTTGAAAATAAAATTAGAA
ATCAACGCAACCTTTTTAAA

Product: recA protein

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSSDKEAKLKALQLTLDKLDKTYGKGTVMKMGDRAIVEVETISSGSLGVDLALGVNGYPKGRIIEIYGPESSGKTTLTLH
AIAEAQKAGGIAAFIDAEHAFDRNYAEKLNVDIENLIISQPDNGEQALEIAENLIRSGAIDIVVIDSVAALTPKSEIEGE
MGDSKMGLHARLMSQALRKLTGTISKTNCTVFFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSAQIKDGENVI
GNRTKVKIVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFDIVKKAGSWFSYGDTKLGQGRDAVKALIKDNPELADE
LEEKIKAHMKELANA

Sequences:

>Translated_335_residues
MSSDKEAKLKALQLTLDKLDKTYGKGTVMKMGDRAIVEVETISSGSLGVDLALGVNGYPKGRIIEIYGPESSGKTTLTLH
AIAEAQKAGGIAAFIDAEHAFDRNYAEKLNVDIENLIISQPDNGEQALEIAENLIRSGAIDIVVIDSVAALTPKSEIEGE
MGDSKMGLHARLMSQALRKLTGTISKTNCTVFFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSAQIKDGENVI
GNRTKVKIVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFDIVKKAGSWFSYGDTKLGQGRDAVKALIKDNPELADE
LEEKIKAHMKELANA
>Mature_334_residues
SSDKEAKLKALQLTLDKLDKTYGKGTVMKMGDRAIVEVETISSGSLGVDLALGVNGYPKGRIIEIYGPESSGKTTLTLHA
IAEAQKAGGIAAFIDAEHAFDRNYAEKLNVDIENLIISQPDNGEQALEIAENLIRSGAIDIVVIDSVAALTPKSEIEGEM
GDSKMGLHARLMSQALRKLTGTISKTNCTVFFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSAQIKDGENVIG
NRTKVKIVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFDIVKKAGSWFSYGDTKLGQGRDAVKALIKDNPELADEL
EEKIKAHMKELANA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=321, Percent_Identity=62.6168224299065, Blast_Score=427, Evalue=1e-121,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 36279; Mature: 36148

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDKEAKLKALQLTLDKLDKTYGKGTVMKMGDRAIVEVETISSGSLGVDLALGVNGYPK
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEEEECCCCCCEEEEECCCCCCC
GRIIEIYGPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRNYAEKLNVDIENLIISQ
CEEEEEECCCCCCCEEEEEEEHHHHHHHCCEEEEEECHHHHCCCHHHHHCCCHHHEEEEC
PDNGEQALEIAENLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKL
CCCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHH
TGTISKTNCTVFFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSAQIKDGENVI
HCCCCCCCEEEEEHHHHHHHHCEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCC
GNRTKVKIVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFDIVKKAGSWFSYGDTKL
CCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCC
GQGRDAVKALIKDNPELADELEEKIKAHMKELANA
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSDKEAKLKALQLTLDKLDKTYGKGTVMKMGDRAIVEVETISSGSLGVDLALGVNGYPK
CCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEEEECCCCCCEEEEECCCCCCC
GRIIEIYGPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRNYAEKLNVDIENLIISQ
CEEEEEECCCCCCCEEEEEEEHHHHHHHCCEEEEEECHHHHCCCHHHHHCCCHHHEEEEC
PDNGEQALEIAENLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKL
CCCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHH
TGTISKTNCTVFFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSAQIKDGENVI
HCCCCCCCEEEEEHHHHHHHHCEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCC
GNRTKVKIVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFDIVKKAGSWFSYGDTKL
CCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCC
GQGRDAVKALIKDNPELADELEEKIKAHMKELANA
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA