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The map label for this gene is pal [C]

Identifier: 146298734

GI number: 146298734

Start: 1088480

End: 1089283

Strand: Direct

Name: pal [C]

Synonym: Fjoh_0973

Alternate gene names: 146298734

Gene position: 1088480-1089283 (Clockwise)

Preceding gene: 146298733

Following gene: 146298746

Centisome position: 17.85

GC content: 35.45

Gene sequence:

>804_bases
ATGAAACTTTCCCGGGTCCTTTTTTTGTTTATTATTTACAATTTAGCGGCACAGCAAAAACCAATCGAAACCGTATATTT
TGATTTCGACAAATACAATCTTACTGAATCGCAGAGCAAAGTTGTAAATAATTTTATAAAATCGATAGACACGGCAAAAG
TTGAATCTATACAAATTTACGGTTACTGTGATGACCGCGGCACTGACGATTATAATTTTCGTTTGTCTCACGACCGGGTT
AATACGATACAAAATTTATTAGTTTCATCAGGGTTTAAGGAAAGTAAAATTGTTATTCTTGAAGGAAAAGGCCGTGTTGT
GGTAAGGCCTGATACAGTCGAAAATCTTTATGAAACCCGATTACGAAACAGACGCGTTGATTTGATTGTGGTAAAACGCA
ACAGTTTTGGAAAAGATATTTACTCTTCTTTTAAAGACAAATTAAAGGTTGGCGACAAAATATATCTTGAAAGCATTTTG
TTTGATATGGGAAGTGCCAGACTCACTCATAATTCGAAAAGGGAACTGGATAAAATTGCACTGACTCTTTTAAAGCAAAA
AAACATACAATTTGAAATACGCGGCCACGTTTGCTGCACTCCTGAAATTTACAGTGACGGAATTGATAAAGACACTAAAG
AAAGAAGGCTTTCGTGGAACCGTGCAAAAAACGTTTTTAATTATCTGAGTTCTAAAAAAGTTTCTAAAAACAGAATGCGG
TATCAAGGCTGCGGCAATAAATTTCCTCTAAGAATGGGCGATAATTACGATCGGCGGGTTGAGTTTTTGATCACGAAAAT
CTAA

Upstream 100 bases:

>100_bases
TTTGTATCAGTTATACATTAAGAACAATTCAGAAATTAAGAGAGCAGTAAACGTATTGAATAATCAAACTGAATATAAAA
CGATTTTAAAAATGTAGAAA

Downstream 100 bases:

>100_bases
ACCATTATTCTAATTATATTGAGATTTTCATATTCTATTTTTCCTTAACCAATACTTCAAACAATAGTTATTACTTGGCT
GTATTTAAATGTTTTATATA

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: OmpA/MotB Domain-Containing Protein; OmpA/MotB

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKLSRVLFLFIIYNLAAQQKPIETVYFDFDKYNLTESQSKVVNNFIKSIDTAKVESIQIYGYCDDRGTDDYNFRLSHDRV
NTIQNLLVSSGFKESKIVILEGKGRVVVRPDTVENLYETRLRNRRVDLIVVKRNSFGKDIYSSFKDKLKVGDKIYLESIL
FDMGSARLTHNSKRELDKIALTLLKQKNIQFEIRGHVCCTPEIYSDGIDKDTKERRLSWNRAKNVFNYLSSKKVSKNRMR
YQGCGNKFPLRMGDNYDRRVEFLITKI

Sequences:

>Translated_267_residues
MKLSRVLFLFIIYNLAAQQKPIETVYFDFDKYNLTESQSKVVNNFIKSIDTAKVESIQIYGYCDDRGTDDYNFRLSHDRV
NTIQNLLVSSGFKESKIVILEGKGRVVVRPDTVENLYETRLRNRRVDLIVVKRNSFGKDIYSSFKDKLKVGDKIYLESIL
FDMGSARLTHNSKRELDKIALTLLKQKNIQFEIRGHVCCTPEIYSDGIDKDTKERRLSWNRAKNVFNYLSSKKVSKNRMR
YQGCGNKFPLRMGDNYDRRVEFLITKI
>Mature_267_residues
MKLSRVLFLFIIYNLAAQQKPIETVYFDFDKYNLTESQSKVVNNFIKSIDTAKVESIQIYGYCDDRGTDDYNFRLSHDRV
NTIQNLLVSSGFKESKIVILEGKGRVVVRPDTVENLYETRLRNRRVDLIVVKRNSFGKDIYSSFKDKLKVGDKIYLESIL
FDMGSARLTHNSKRELDKIALTLLKQKNIQFEIRGHVCCTPEIYSDGIDKDTKERRLSWNRAKNVFNYLSSKKVSKNRMR
YQGCGNKFPLRMGDNYDRRVEFLITKI

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31277; Mature: 31277

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSRVLFLFIIYNLAAQQKPIETVYFDFDKYNLTESQSKVVNNFIKSIDTAKVESIQIY
CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEE
GYCDDRGTDDYNFRLSHDRVNTIQNLLVSSGFKESKIVILEGKGRVVVRPDTVENLYETR
EEECCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCHHHHHHHHH
LRNRRVDLIVVKRNSFGKDIYSSFKDKLKVGDKIYLESILFDMGSARLTHNSKRELDKIA
HHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LTLLKQKNIQFEIRGHVCCTPEIYSDGIDKDTKERRLSWNRAKNVFNYLSSKKVSKNRMR
HHHHHHCCCEEEEECCEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQGCGNKFPLRMGDNYDRRVEFLITKI
HCCCCCCCCCCCCCCHHHEEEEEEECC
>Mature Secondary Structure
MKLSRVLFLFIIYNLAAQQKPIETVYFDFDKYNLTESQSKVVNNFIKSIDTAKVESIQIY
CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEE
GYCDDRGTDDYNFRLSHDRVNTIQNLLVSSGFKESKIVILEGKGRVVVRPDTVENLYETR
EEECCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCHHHHHHHHH
LRNRRVDLIVVKRNSFGKDIYSSFKDKLKVGDKIYLESILFDMGSARLTHNSKRELDKIA
HHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LTLLKQKNIQFEIRGHVCCTPEIYSDGIDKDTKERRLSWNRAKNVFNYLSSKKVSKNRMR
HHHHHHCCCEEEEECCEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQGCGNKFPLRMGDNYDRRVEFLITKI
HCCCCCCCCCCCCCCHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA