| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is feoB [H]
Identifier: 146298724
GI number: 146298724
Start: 1075262
End: 1077361
Strand: Direct
Name: feoB [H]
Synonym: Fjoh_0962
Alternate gene names: 146298724
Gene position: 1075262-1077361 (Clockwise)
Preceding gene: 146298723
Following gene: 146298725
Centisome position: 17.64
GC content: 36.1
Gene sequence:
>2100_bases ATGAGCATTCAGAATATCAATGTTGCCCTTATTGGAAACCCAAACACAGGAAAAACTTCTGTATTTAATCAGTTAACAGG TTTAAATCAACAAGTTGGGAATTATCCCGGAATTACGGTCGAGAAAAAAATCGGGTTTTGTAAATTACCTCAAAACATAA AAGCGAACATTCTCGATTTACCGGGAACGTATAGTTTGAATGCAAGTTCAATGGACGAAAGTGTGGTAATTGAACTTTTG CTCAACAAAAACGACAAATTATATCCGGATGTTGCCGTTGTGGTAACTGATGTTGAAAATCTAAAAAGAAATTTACTGAT TTACACTCAGATAAAAGACCTTGAAATTCCAACGATTTTGGTTATCAATATGTCTGATCGTATGGAAAGCAAAGGAATTT CATTAGATATTCCGTATTTAGAAGAAAAACTAAAAACCAAAATTGCTCTGGTAAGTTCGCGCAAAGGTTTAGGAATTGAA GAATTAAAAGAACTTATTGTTTCGTATAAAACGATCACGCATGAACCTTGCTTAAACGCTTCGGTAATTGATCCTGAATA TTTTGAAAAACTGCAGCATGCTTTTCCAAATCAATTAATGTATAAATTGTGGCTGGTAATTACGCAGGATGTTAACTTTT CGAATTTAGACCGAAATGAAATCCGCAATACGTTTACCAAATCACATTCAGAGTTAAAACGTTTACAGCAAAAGGAAACC ATCAAAAGATATCAGTTTATAAATGATGTTTTAAAAGAAGGTTTAAAAGTTGATGCATCTGCTGCTACAGATTTCAGGGC AAAACTAGACCGTGTTTTAACCCACAAGTTTTGGGGTTATGCTATTTTCCTTGGTATCTTATTTATTATTTTCCAATCGA TTTTCAGCTGGTCAACTATTCCTATGGATTTTATTGATGCCAGTTTTGCTTCATTAAGCAGCTGGGTTTCTGAAGAACTG CCAAGCGGTATTTTAACCGATTTGCTTTCGCAGGGAATCATTCCGGGAATTGGCGGCGTTATTATTTTTATTCCGCAGAT TGCCTTTTTGTTCCTCTTTATTTCCATTCTCGAAGAAAGCGGTTATATGAGCCGTGTGGTATTTTTGATGGATAAAATAA TGCGCAAATTTGGACTTTCCGGAAAAAGCGTTGTGCCATTAATTTCGGGAACGGCTTGTGCTATTCCGGCTATTATGGCA ACCCGAAATATCGAGAACTGGAAAGAACGCCTAATTACGATCTTAGTAACGCCATTCACGACTTGCTCGGCAAGATTACC GGTTTATGCAATTATGATTTCATTGGTAATTCCGAATAAACGAGTTCTTGGATTTTTAAATCTTCAGGGATTATCCTTGA TGTTACTGTATCTGTTAGGATTCGTAGCGGCGATAATCTCGGCTTATATTTTAAATAAAGTTTTAAAGCTGGATTCAAAA ACGTATTTCGTTGTCGAAATGCCAAGTTATAAATTACCGCTTTTAAAGAATGTTGGAATTAATGTGGTAGAGAAAACCAA AGCTTTCGTTTTGGGTGCGGGTAAAATTATCTTAGCAATATCGGTTATTTTATGGTTTTTGGCTTCATTTGGTCCCGGAA AAGAATTTAATGATGCTGAGACTATTGTTAAAGAAAGATTTGCAAATACCACTTTAGACGAAACTCAGTTTGAAAATGAA GTAGCTTCTCAAAAAATAGAAAACTCTTATATCGGGATTATGGGTAAAGCTATTGAGCCTGTAATTTCTCCTTTGGGTTA CGACTGGAAAATAGGAATTGCGATTATCAGTTCGTTTGCAGCGCGTGAGGTTTTGGTTGGTACATTGGCGACAATTTACA GTGTGGGAGACAGCGATAACGAATCGACTATTAAAAGCCGAATGCAGAAAGAAGTAAATCCGGAAACAGGCGAAAAGATA TTTAACTTTGCAACCGGTATTTCGTTATTGCTCTTTTATGCCTTTGCCATGCAGTGCGCCAGTACATTAGCGATTACCAA AAAAGAAACCAATTCATGGAAATGGCCTGTTATGCAGTTGTTTTTTATGACTGGACTGGCTTACATTTCGGCGCTTATAG CGTATCAATTTTTAAAGTAA
Upstream 100 bases:
>100_bases TTGGAGATCCTCTATATCTAGACATTAACGGTTCGCATGTTGCTATTCGTGTTGAAACTGCTCGTGAAATTGAAGTTGAA CTTATCCAAAACAATTTATA
Downstream 100 bases:
>100_bases AATGTCATGGTGCAAGAAATTATTGCCTTTTCTATATTAGGTATTGCCGTTGCTTTTTTGATCAGAAAGTTCTTTTGGAA ATCAAAAAAGAAAAAAGACT
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 699; Mature: 698
Protein sequence:
>699_residues MSIQNINVALIGNPNTGKTSVFNQLTGLNQQVGNYPGITVEKKIGFCKLPQNIKANILDLPGTYSLNASSMDESVVIELL LNKNDKLYPDVAVVVTDVENLKRNLLIYTQIKDLEIPTILVINMSDRMESKGISLDIPYLEEKLKTKIALVSSRKGLGIE ELKELIVSYKTITHEPCLNASVIDPEYFEKLQHAFPNQLMYKLWLVITQDVNFSNLDRNEIRNTFTKSHSELKRLQQKET IKRYQFINDVLKEGLKVDASAATDFRAKLDRVLTHKFWGYAIFLGILFIIFQSIFSWSTIPMDFIDASFASLSSWVSEEL PSGILTDLLSQGIIPGIGGVIIFIPQIAFLFLFISILEESGYMSRVVFLMDKIMRKFGLSGKSVVPLISGTACAIPAIMA TRNIENWKERLITILVTPFTTCSARLPVYAIMISLVIPNKRVLGFLNLQGLSLMLLYLLGFVAAIISAYILNKVLKLDSK TYFVVEMPSYKLPLLKNVGINVVEKTKAFVLGAGKIILAISVILWFLASFGPGKEFNDAETIVKERFANTTLDETQFENE VASQKIENSYIGIMGKAIEPVISPLGYDWKIGIAIISSFAAREVLVGTLATIYSVGDSDNESTIKSRMQKEVNPETGEKI FNFATGISLLLFYAFAMQCASTLAITKKETNSWKWPVMQLFFMTGLAYISALIAYQFLK
Sequences:
>Translated_699_residues MSIQNINVALIGNPNTGKTSVFNQLTGLNQQVGNYPGITVEKKIGFCKLPQNIKANILDLPGTYSLNASSMDESVVIELL LNKNDKLYPDVAVVVTDVENLKRNLLIYTQIKDLEIPTILVINMSDRMESKGISLDIPYLEEKLKTKIALVSSRKGLGIE ELKELIVSYKTITHEPCLNASVIDPEYFEKLQHAFPNQLMYKLWLVITQDVNFSNLDRNEIRNTFTKSHSELKRLQQKET IKRYQFINDVLKEGLKVDASAATDFRAKLDRVLTHKFWGYAIFLGILFIIFQSIFSWSTIPMDFIDASFASLSSWVSEEL PSGILTDLLSQGIIPGIGGVIIFIPQIAFLFLFISILEESGYMSRVVFLMDKIMRKFGLSGKSVVPLISGTACAIPAIMA TRNIENWKERLITILVTPFTTCSARLPVYAIMISLVIPNKRVLGFLNLQGLSLMLLYLLGFVAAIISAYILNKVLKLDSK TYFVVEMPSYKLPLLKNVGINVVEKTKAFVLGAGKIILAISVILWFLASFGPGKEFNDAETIVKERFANTTLDETQFENE VASQKIENSYIGIMGKAIEPVISPLGYDWKIGIAIISSFAAREVLVGTLATIYSVGDSDNESTIKSRMQKEVNPETGEKI FNFATGISLLLFYAFAMQCASTLAITKKETNSWKWPVMQLFFMTGLAYISALIAYQFLK >Mature_698_residues SIQNINVALIGNPNTGKTSVFNQLTGLNQQVGNYPGITVEKKIGFCKLPQNIKANILDLPGTYSLNASSMDESVVIELLL NKNDKLYPDVAVVVTDVENLKRNLLIYTQIKDLEIPTILVINMSDRMESKGISLDIPYLEEKLKTKIALVSSRKGLGIEE LKELIVSYKTITHEPCLNASVIDPEYFEKLQHAFPNQLMYKLWLVITQDVNFSNLDRNEIRNTFTKSHSELKRLQQKETI KRYQFINDVLKEGLKVDASAATDFRAKLDRVLTHKFWGYAIFLGILFIIFQSIFSWSTIPMDFIDASFASLSSWVSEELP SGILTDLLSQGIIPGIGGVIIFIPQIAFLFLFISILEESGYMSRVVFLMDKIMRKFGLSGKSVVPLISGTACAIPAIMAT RNIENWKERLITILVTPFTTCSARLPVYAIMISLVIPNKRVLGFLNLQGLSLMLLYLLGFVAAIISAYILNKVLKLDSKT YFVVEMPSYKLPLLKNVGINVVEKTKAFVLGAGKIILAISVILWFLASFGPGKEFNDAETIVKERFANTTLDETQFENEV ASQKIENSYIGIMGKAIEPVISPLGYDWKIGIAIISSFAAREVLVGTLATIYSVGDSDNESTIKSRMQKEVNPETGEKIF NFATGISLLLFYAFAMQCASTLAITKKETNSWKWPVMQLFFMTGLAYISALIAYQFLK
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=680, Percent_Identity=30.8823529411765, Blast_Score=289, Evalue=5e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 78157; Mature: 78026
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQNINVALIGNPNTGKTSVFNQLTGLNQQVGNYPGITVEKKIGFCKLPQNIKANILDL CCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHCCCCCEEEECCCCCEECCCCCCCCEEEC PGTYSLNASSMDESVVIELLLNKNDKLYPDVAVVVTDVENLKRNLLIYTQIKDLEIPTIL CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECHHHHHCCEEEEEEEECCCCCEEE VINMSDRMESKGISLDIPYLEEKLKTKIALVSSRKGLGIEELKELIVSYKTITHEPCLNA EEECHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC SVIDPEYFEKLQHAFPNQLMYKLWLVITQDVNFSNLDRNEIRNTFTKSHSELKRLQQKET CCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IKRYQFINDVLKEGLKVDASAATDFRAKLDRVLTHKFWGYAIFLGILFIIFQSIFSWSTI HHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PMDFIDASFASLSSWVSEELPSGILTDLLSQGIIPGIGGVIIFIPQIAFLFLFISILEES CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GYMSRVVFLMDKIMRKFGLSGKSVVPLISGTACAIPAIMATRNIENWKERLITILVTPFT CHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHCCHHHHHHHEEEHEECCCC TCSARLPVYAIMISLVIPNKRVLGFLNLQGLSLMLLYLLGFVAAIISAYILNKVLKLDSK CCCCCCHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TYFVVEMPSYKLPLLKNVGINVVEKTKAFVLGAGKIILAISVILWFLASFGPGKEFNDAE EEEEEECCCCCCCHHHHCCCCHHHHHHHHEEECCHHHHHHHHHHHHHHCCCCCCCCCHHH TIVKERFANTTLDETQFENEVASQKIENSYIGIMGKAIEPVISPLGYDWKIGIAIISSFA HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AREVLVGTLATIYSVGDSDNESTIKSRMQKEVNPETGEKIFNFATGISLLLFYAFAMQCA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH STLAITKKETNSWKWPVMQLFFMTGLAYISALIAYQFLK HHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIQNINVALIGNPNTGKTSVFNQLTGLNQQVGNYPGITVEKKIGFCKLPQNIKANILDL CCCEEEEEEEECCCCCHHHHHHHHHCCHHHHCCCCCEEEECCCCCEECCCCCCCCEEEC PGTYSLNASSMDESVVIELLLNKNDKLYPDVAVVVTDVENLKRNLLIYTQIKDLEIPTIL CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECHHHHHCCEEEEEEEECCCCCEEE VINMSDRMESKGISLDIPYLEEKLKTKIALVSSRKGLGIEELKELIVSYKTITHEPCLNA EEECHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC SVIDPEYFEKLQHAFPNQLMYKLWLVITQDVNFSNLDRNEIRNTFTKSHSELKRLQQKET CCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IKRYQFINDVLKEGLKVDASAATDFRAKLDRVLTHKFWGYAIFLGILFIIFQSIFSWSTI HHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PMDFIDASFASLSSWVSEELPSGILTDLLSQGIIPGIGGVIIFIPQIAFLFLFISILEES CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GYMSRVVFLMDKIMRKFGLSGKSVVPLISGTACAIPAIMATRNIENWKERLITILVTPFT CHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHCCHHHHHHHEEEHEECCCC TCSARLPVYAIMISLVIPNKRVLGFLNLQGLSLMLLYLLGFVAAIISAYILNKVLKLDSK CCCCCCHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TYFVVEMPSYKLPLLKNVGINVVEKTKAFVLGAGKIILAISVILWFLASFGPGKEFNDAE EEEEEECCCCCCCHHHHCCCCHHHHHHHHEEECCHHHHHHHHHHHHHHCCCCCCCCCHHH TIVKERFANTTLDETQFENEVASQKIENSYIGIMGKAIEPVISPLGYDWKIGIAIISSFA HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AREVLVGTLATIYSVGDSDNESTIKSRMQKEVNPETGEKIFNFATGISLLLFYAFAMQCA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH STLAITKKETNSWKWPVMQLFFMTGLAYISALIAYQFLK HHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA