| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298659
Identifier: 146298659
GI number: 146298659
Start: 1012518
End: 1013699
Strand: Direct
Name: 146298659
Synonym: Fjoh_0897
Alternate gene names: NA
Gene position: 1012518-1013699 (Clockwise)
Preceding gene: 146298658
Following gene: 146298660
Centisome position: 16.61
GC content: 34.52
Gene sequence:
>1182_bases ATGCAGACACAGAATATTATCGAACAGTACATTTTTCAAGGAAATCTTGACGCCGCGAGAGAAGCAATTAAAAATGGCGA ATCCTTTTCTGAGCAATATCTTAAAAACAATTTTTCGCAGATAACCGCCAAAATTTTTGAAGCAAAAGCTCTTGATCTTG TAGAAGCTTTGATAAAAGCAGGCTTTATAGAAACTGATATTTACGAATTAGACAGTTTTGATAAATCGATTTTCAGTTCA TTGGCCCGAAATATAAAAGGTGATGACGAGTCTTTGGCTTTCTTCAAAGAAATAATGTCGAAAATGGACAATGTCAATGA CGAAATAAGCGACCAGACTTTATTGGGTTACTGCATCGAAAAGGAAGCCGTTCCGGAAATCATTAAAAGTTTAATAGAAG ATTTTGGCTGTAATGCTGATTATAAAAACAATGCACAGGAAAATCTGATTCATAAAATTGTAAATAACTATTCTCTAAAT GCAGAGAAAGGCAAAGAATACATCAAAACTCTTGTTGAAAACGGAGTTGACATCAACGAAAAAAATGTTGTTGGTACTAC GCCCCTAATGTATGCAGTGAAAAGAAACAAAAAAGAATACATTCCATTGCTATTAGAAAATGGGGCCGATCCTAACGAAA AAGACAATCAGGAAAACAGTTCTTTTTATTATGCTGTTGGCGAACAATTTTCTATGCCCATGTATGAACTTTTAGCAGAA TCATCTACGGCAGACTTTAACAGCATCAATAAAGACGGAAGAACTTTGCTGACCGAATTTATCCGTATGATGTCTGATTC AGAAAATGACTTGAATTCACTACAAAGATTATTATCTGATGGTGCTGACTTAAAACACAGCGCTTTATATTATGGAAATC CAAAATCAGGCATAGATTATGTAGCTGAGAAAAAATCCGGTATTCTAAAATCTGTATTAGACAGCGGCTCTATTGATATC AACGAACAGGACAATCAAGGAAACACCATCTTACACAAAGTCTGCGCATACAATGTAAATTATGATGCCGAAGCTGCAAA AGAAATCTATAGAAAAGTAAAACTGCTGCTTGAAAATGGCGCCGATAAAGACATTAGCAACGATAAAGACGAAACAGCCT TAATACTTGCTTCTACAGATAATTTGAAAATAAAAACTGTTGAACTTTTAATGAAAGCCTAA
Upstream 100 bases:
>100_bases ATTTTATGTTTTATCTTACAACATGATTTATGTTCTCATGAATTTAGAATTCTTGAGAATATAAATTGCGCTTATATTTC AACTCAAAAATATTTTTTAC
Downstream 100 bases:
>100_bases TTTTTAGAAATATATAAAATCACGATTATATGTCAATGTCATTTATAATTGCCTGTGAAAACGGCAACCGAAAAATAGCC GAATTACTCCTTCAAAATAA
Product: ankyrin
Products: NA
Alternate protein names: Pfs Nacht And Ankyrin Domain Protein; Ankyrin Repeat Domain Protein
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MQTQNIIEQYIFQGNLDAAREAIKNGESFSEQYLKNNFSQITAKIFEAKALDLVEALIKAGFIETDIYELDSFDKSIFSS LARNIKGDDESLAFFKEIMSKMDNVNDEISDQTLLGYCIEKEAVPEIIKSLIEDFGCNADYKNNAQENLIHKIVNNYSLN AEKGKEYIKTLVENGVDINEKNVVGTTPLMYAVKRNKKEYIPLLLENGADPNEKDNQENSSFYYAVGEQFSMPMYELLAE SSTADFNSINKDGRTLLTEFIRMMSDSENDLNSLQRLLSDGADLKHSALYYGNPKSGIDYVAEKKSGILKSVLDSGSIDI NEQDNQGNTILHKVCAYNVNYDAEAAKEIYRKVKLLLENGADKDISNDKDETALILASTDNLKIKTVELLMKA
Sequences:
>Translated_393_residues MQTQNIIEQYIFQGNLDAAREAIKNGESFSEQYLKNNFSQITAKIFEAKALDLVEALIKAGFIETDIYELDSFDKSIFSS LARNIKGDDESLAFFKEIMSKMDNVNDEISDQTLLGYCIEKEAVPEIIKSLIEDFGCNADYKNNAQENLIHKIVNNYSLN AEKGKEYIKTLVENGVDINEKNVVGTTPLMYAVKRNKKEYIPLLLENGADPNEKDNQENSSFYYAVGEQFSMPMYELLAE SSTADFNSINKDGRTLLTEFIRMMSDSENDLNSLQRLLSDGADLKHSALYYGNPKSGIDYVAEKKSGILKSVLDSGSIDI NEQDNQGNTILHKVCAYNVNYDAEAAKEIYRKVKLLLENGADKDISNDKDETALILASTDNLKIKTVELLMKA >Mature_393_residues MQTQNIIEQYIFQGNLDAAREAIKNGESFSEQYLKNNFSQITAKIFEAKALDLVEALIKAGFIETDIYELDSFDKSIFSS LARNIKGDDESLAFFKEIMSKMDNVNDEISDQTLLGYCIEKEAVPEIIKSLIEDFGCNADYKNNAQENLIHKIVNNYSLN AEKGKEYIKTLVENGVDINEKNVVGTTPLMYAVKRNKKEYIPLLLENGADPNEKDNQENSSFYYAVGEQFSMPMYELLAE SSTADFNSINKDGRTLLTEFIRMMSDSENDLNSLQRLLSDGADLKHSALYYGNPKSGIDYVAEKKSGILKSVLDSGSIDI NEQDNQGNTILHKVCAYNVNYDAEAAKEIYRKVKLLLENGADKDISNDKDETALILASTDNLKIKTVELLMKA
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44175; Mature: 44175
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTQNIIEQYIFQGNLDAAREAIKNGESFSEQYLKNNFSQITAKIFEAKALDLVEALIKA CCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GFIETDIYELDSFDKSIFSSLARNIKGDDESLAFFKEIMSKMDNVNDEISDQTLLGYCIE CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHH KEAVPEIIKSLIEDFGCNADYKNNAQENLIHKIVNNYSLNAEKGKEYIKTLVENGVDINE HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC KNVVGTTPLMYAVKRNKKEYIPLLLENGADPNEKDNQENSSFYYAVGEQFSMPMYELLAE CCCCCCCHHHHHHHHCCHHHCCHHEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHC SSTADFNSINKDGRTLLTEFIRMMSDSENDLNSLQRLLSDGADLKHSALYYGNPKSGIDY CCCCCHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHH VAEKKSGILKSVLDSGSIDINEQDNQGNTILHKVCAYNVNYDAEAAKEIYRKVKLLLENG HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC ADKDISNDKDETALILASTDNLKIKTVELLMKA CCCCCCCCCCCEEEEEEECCCCEEHHHHHHHCC >Mature Secondary Structure MQTQNIIEQYIFQGNLDAAREAIKNGESFSEQYLKNNFSQITAKIFEAKALDLVEALIKA CCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GFIETDIYELDSFDKSIFSSLARNIKGDDESLAFFKEIMSKMDNVNDEISDQTLLGYCIE CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHH KEAVPEIIKSLIEDFGCNADYKNNAQENLIHKIVNNYSLNAEKGKEYIKTLVENGVDINE HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC KNVVGTTPLMYAVKRNKKEYIPLLLENGADPNEKDNQENSSFYYAVGEQFSMPMYELLAE CCCCCCCHHHHHHHHCCHHHCCHHEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHC SSTADFNSINKDGRTLLTEFIRMMSDSENDLNSLQRLLSDGADLKHSALYYGNPKSGIDY CCCCCHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHH VAEKKSGILKSVLDSGSIDINEQDNQGNTILHKVCAYNVNYDAEAAKEIYRKVKLLLENG HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC ADKDISNDKDETALILASTDNLKIKTVELLMKA CCCCCCCCCCCEEEEEEECCCCEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA