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The map label for this gene is spmB [H]

Identifier: 146298641

GI number: 146298641

Start: 991565

End: 993004

Strand: Direct

Name: spmB [H]

Synonym: Fjoh_0879

Alternate gene names: 146298641

Gene position: 991565-993004 (Clockwise)

Preceding gene: 146298640

Following gene: 146298642

Centisome position: 16.26

GC content: 35.14

Gene sequence:

>1440_bases
ATGGTATTAAGCAGATTTTGGTTAGTTATTTTTATTTCTTCGATTGTTTTTATTGTTGTGAGCTTATTTACAGCCAACAC
TTATACTATTGATTCTGTTTTAAATGGAAAGAAAGACGATCCAATTCTGGTATCTGAAAAATATATCGAACAGCTTCCTG
TTTTTATTAAAGACAGTATAAAAAAAGCTCCAGATCAAACCATGATTATTAATCGTGACACGCTTAATGCCGACACGACT
TATGTTTATAAAAACAAAACTGTAAAAATTTACAGCGGACTTCAGAAATCTGATGGTTTACTGCCGACTTGTAAAAGCAC
TTTGGTTGATTTAATTCTGCCATTGATTGCTTACCTGGCTTTTTTCTGCGGCTTAATGGAACTTTTAATTGTTTCTGGCG
CATCTGGAAACCTGGCTAAAGTATTGAGTCCGGTATTTGTAAAGGTTTTTCCAAGTATTCCAAAAAATCACCCGTCAATC
TCATACATGACTTTAAATTTTGCTGCAAATTTCTTAGGATTGGATTCGGCTGCAACACCATTTGGACTTAAAGCCATGGA
GAGTTTACAGGAAATAAACCCCGATAAAGACAAAGCCAGCGACGCCCAGATTATGTTTATGTGTCTGCACGCATCAGGTT
TAACTTTGATTGCTACTTCAATTATTGGATATCGTGCTGCTGCAAACGCAAGTAATCCTGCTGATGTTATGCTGCCTTGT
ATTATTACTTCTTTCATCGGAACAATAGCAGCTTTCTTAATTGTGGGTATCAAACAAAAAATAAATTTTAAAAGTGCCTC
ACTTTTAATTGTTTTAATGGGATTAATTGCTGCTATTGTAGGCTTGTTAATGTACGTGAACCAATTGGATTTAATTGGCA
AAAATTACTTCACTTCTAACCTTTCAGGATTAATCTTAATTGCTATTATTGCTTTTACTTTGATTTTCTCTTTTAAAAAT
GAAAAGAAATTCAGCGAAGCCAACACAACTGTTTTTGACACTTTTGTTGTTGGTGCCAATAATGGTGTTAAAACCGGAGT
TACTATTTTTCCTTATGTCTTAGGAATGCTGGTTGCTATCTCTTTATTCAGAAACAGCGGTTTATTCGAAATTATCAGTG
ATGGAATTGCGTTTGTATTTTCTAATATGGGCGTAAGCAAAGAAATCACAAATGCATTACCGGTTGCAATGCTTCGTCCG
TTTAGTTCAGCAGGATCACGCGGCTTCCTTATCGACTCTATGAATACTTTTGGAGCCGATTCTTTAACGGCAAGATTAAG
CAGTATTTTCCAGTGCAGTGCCGAAAGTACTTTTTATGTAATTGCAGTTTATTTTGGCTCAGTTAATATCAAAAATACCC
GTTATGCTTTAGGGACGATGCTTTTGGTGGATCTTATCTGTGTTATTACAGCGATTTTTGTGGCTACTTGGTTTTTTTAA

Upstream 100 bases:

>100_bases
AAACATTATACAAAGCCGTAATTATCAAATTCCCGTCTCAATAAATAAAATCTTTATGCATATTCTGGCTAAATAATTAC
ATTTACAAAAAAATAGAATT

Downstream 100 bases:

>100_bases
ACTATGTGGGAAATATCAAAATTAATATGCCTCTTTATCGGAAATAGTGTTAAATGGGTATATTATGGAGGAAAAAAACC
AATGAATGAAGTTGCAAAAG

Product: nucleoside recognition domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MVLSRFWLVIFISSIVFIVVSLFTANTYTIDSVLNGKKDDPILVSEKYIEQLPVFIKDSIKKAPDQTMIINRDTLNADTT
YVYKNKTVKIYSGLQKSDGLLPTCKSTLVDLILPLIAYLAFFCGLMELLIVSGASGNLAKVLSPVFVKVFPSIPKNHPSI
SYMTLNFAANFLGLDSAATPFGLKAMESLQEINPDKDKASDAQIMFMCLHASGLTLIATSIIGYRAAANASNPADVMLPC
IITSFIGTIAAFLIVGIKQKINFKSASLLIVLMGLIAAIVGLLMYVNQLDLIGKNYFTSNLSGLILIAIIAFTLIFSFKN
EKKFSEANTTVFDTFVVGANNGVKTGVTIFPYVLGMLVAISLFRNSGLFEIISDGIAFVFSNMGVSKEITNALPVAMLRP
FSSAGSRGFLIDSMNTFGADSLTARLSSIFQCSAESTFYVIAVYFGSVNIKNTRYALGTMLLVDLICVITAIFVATWFF

Sequences:

>Translated_479_residues
MVLSRFWLVIFISSIVFIVVSLFTANTYTIDSVLNGKKDDPILVSEKYIEQLPVFIKDSIKKAPDQTMIINRDTLNADTT
YVYKNKTVKIYSGLQKSDGLLPTCKSTLVDLILPLIAYLAFFCGLMELLIVSGASGNLAKVLSPVFVKVFPSIPKNHPSI
SYMTLNFAANFLGLDSAATPFGLKAMESLQEINPDKDKASDAQIMFMCLHASGLTLIATSIIGYRAAANASNPADVMLPC
IITSFIGTIAAFLIVGIKQKINFKSASLLIVLMGLIAAIVGLLMYVNQLDLIGKNYFTSNLSGLILIAIIAFTLIFSFKN
EKKFSEANTTVFDTFVVGANNGVKTGVTIFPYVLGMLVAISLFRNSGLFEIISDGIAFVFSNMGVSKEITNALPVAMLRP
FSSAGSRGFLIDSMNTFGADSLTARLSSIFQCSAESTFYVIAVYFGSVNIKNTRYALGTMLLVDLICVITAIFVATWFF
>Mature_479_residues
MVLSRFWLVIFISSIVFIVVSLFTANTYTIDSVLNGKKDDPILVSEKYIEQLPVFIKDSIKKAPDQTMIINRDTLNADTT
YVYKNKTVKIYSGLQKSDGLLPTCKSTLVDLILPLIAYLAFFCGLMELLIVSGASGNLAKVLSPVFVKVFPSIPKNHPSI
SYMTLNFAANFLGLDSAATPFGLKAMESLQEINPDKDKASDAQIMFMCLHASGLTLIATSIIGYRAAANASNPADVMLPC
IITSFIGTIAAFLIVGIKQKINFKSASLLIVLMGLIAAIVGLLMYVNQLDLIGKNYFTSNLSGLILIAIIAFTLIFSFKN
EKKFSEANTTVFDTFVVGANNGVKTGVTIFPYVLGMLVAISLFRNSGLFEIISDGIAFVFSNMGVSKEITNALPVAMLRP
FSSAGSRGFLIDSMNTFGADSLTARLSSIFQCSAESTFYVIAVYFGSVNIKNTRYALGTMLLVDLICVITAIFVATWFF

Specific function: Involved in spore core dehydration; might be involved in the transport of something into or out of the forespore or could be required for some modification of the cortex peptidoglycan structure [H]

COG id: COG0700

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spmB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 52042; Mature: 52042

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSRFWLVIFISSIVFIVVSLFTANTYTIDSVLNGKKDDPILVSEKYIEQLPVFIKDSI
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCEEECHHHHHHCCHHHHHHH
KKAPDQTMIINRDTLNADTTYVYKNKTVKIYSGLQKSDGLLPTCKSTLVDLILPLIAYLA
HCCCCCEEEEECCCCCCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
FFCGLMELLIVSGASGNLAKVLSPVFVKVFPSIPKNHPSISYMTLNFAANFLGLDSAATP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHCCCCCCCC
FGLKAMESLQEINPDKDKASDAQIMFMCLHASGLTLIATSIIGYRAAANASNPADVMLPC
CHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
IITSFIGTIAAFLIVGIKQKINFKSASLLIVLMGLIAAIVGLLMYVNQLDLIGKNYFTSN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
LSGLILIAIIAFTLIFSFKNEKKFSEANTTVFDTFVVGANNGVKTGVTIFPYVLGMLVAI
CHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH
SLFRNSGLFEIISDGIAFVFSNMGVSKEITNALPVAMLRPFSSAGSRGFLIDSMNTFGAD
HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCH
SLTARLSSIFQCSAESTFYVIAVYFGSVNIKNTRYALGTMLLVDLICVITAIFVATWFF
HHHHHHHHHHHCCCCCCEEEEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVLSRFWLVIFISSIVFIVVSLFTANTYTIDSVLNGKKDDPILVSEKYIEQLPVFIKDSI
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCEEECHHHHHHCCHHHHHHH
KKAPDQTMIINRDTLNADTTYVYKNKTVKIYSGLQKSDGLLPTCKSTLVDLILPLIAYLA
HCCCCCEEEEECCCCCCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
FFCGLMELLIVSGASGNLAKVLSPVFVKVFPSIPKNHPSISYMTLNFAANFLGLDSAATP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHCCCCCCCC
FGLKAMESLQEINPDKDKASDAQIMFMCLHASGLTLIATSIIGYRAAANASNPADVMLPC
CHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
IITSFIGTIAAFLIVGIKQKINFKSASLLIVLMGLIAAIVGLLMYVNQLDLIGKNYFTSN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
LSGLILIAIIAFTLIFSFKNEKKFSEANTTVFDTFVVGANNGVKTGVTIFPYVLGMLVAI
CHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH
SLFRNSGLFEIISDGIAFVFSNMGVSKEITNALPVAMLRPFSSAGSRGFLIDSMNTFGAD
HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCH
SLTARLSSIFQCSAESTFYVIAVYFGSVNIKNTRYALGTMLLVDLICVITAIFVATWFF
HHHHHHHHHHHCCCCCCEEEEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 1548223; 7642500 [H]