| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is ftnB [H]
Identifier: 146298628
GI number: 146298628
Start: 979276
End: 979794
Strand: Direct
Name: ftnB [H]
Synonym: Fjoh_0866
Alternate gene names: 146298628
Gene position: 979276-979794 (Clockwise)
Preceding gene: 146298627
Following gene: 146298629
Centisome position: 16.06
GC content: 34.68
Gene sequence:
>519_bases ATGCTATCAAAAAATATTGAATCGGCTTTAAACAAGCAAATCCGCATAGAAGCAGAATCTTCTCAAACTTATCTTTCTAT GGCTTGTTGGGCTGAAGTACAAGGATTAGAGGGAATCGCTCAATTTATGTACACTCAATCAGATGAAGAGCGTGCACACA TGCTTAAATTGGTTAAGTATGTAAACGAACGCGGAGGCCACGCTCAGGTTACAGATCTTAAAGCGCCAAAAACAACTTAT ACAACTTTCAAAGAAATGTTTGAGGAGCTTTACAATCACGAACTTTTTGTTTCGAAATCTATCAACGAATTAGTACATAT TACTTTTGAAGAAAAAGACTATGCTACACATAATTTCTTGCAATGGTACGTTTCTGAACAAATTGAAGAAGAAGCTACAG CTAAATCTATTTTGGATAAAATCAACTTAATTGGAGACGATAAAGGCGGACTTTATTTGTTTGACCGTGATATTCAGCAA TTAACAGTTACAAGCTCTATTGCTATAAATCCAAAATAA
Upstream 100 bases:
>100_bases AGCCTGCTTCTTTTGATCCTATAAAATCCCATTAATGTTTTCGCGGTTTGTAAAAAATGGTTTGGATTATTTTTTCTAAT TTTACAAAAAAGACATCATT
Downstream 100 bases:
>100_bases AAAAGTTAAAGTTTATTTAGAACGCTTAAAAATAACTTTTTTCGTTTATATTTGTCTCTGTTTTTATAATACAGAGGAAT TTTGAGCAAGAAAGACAAAG
Product: ferroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MLSKNIESALNKQIRIEAESSQTYLSMACWAEVQGLEGIAQFMYTQSDEERAHMLKLVKYVNERGGHAQVTDLKAPKTTY TTFKEMFEELYNHELFVSKSINELVHITFEEKDYATHNFLQWYVSEQIEEEATAKSILDKINLIGDDKGGLYLFDRDIQQ LTVTSSIAINPK
Sequences:
>Translated_172_residues MLSKNIESALNKQIRIEAESSQTYLSMACWAEVQGLEGIAQFMYTQSDEERAHMLKLVKYVNERGGHAQVTDLKAPKTTY TTFKEMFEELYNHELFVSKSINELVHITFEEKDYATHNFLQWYVSEQIEEEATAKSILDKINLIGDDKGGLYLFDRDIQQ LTVTSSIAINPK >Mature_172_residues MLSKNIESALNKQIRIEAESSQTYLSMACWAEVQGLEGIAQFMYTQSDEERAHMLKLVKYVNERGGHAQVTDLKAPKTTY TTFKEMFEELYNHELFVSKSINELVHITFEEKDYATHNFLQWYVSEQIEEEATAKSILDKINLIGDDKGGLYLFDRDIQQ LTVTSSIAINPK
Specific function: Iron-storage protein [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=161, Percent_Identity=39.1304347826087, Blast_Score=130, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17506345, Length=156, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 19810; Mature: 19810
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKNIESALNKQIRIEAESSQTYLSMACWAEVQGLEGIAQFMYTQSDEERAHMLKLVKY CCCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VNERGGHAQVTDLKAPKTTYTTFKEMFEELYNHELFVSKSINELVHITFEEKDYATHNFL HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHEEEEECCCCCHHHHHH QWYVSEQIEEEATAKSILDKINLIGDDKGGLYLFDRDIQQLTVTSSIAINPK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHEEEEEEEEECCC >Mature Secondary Structure MLSKNIESALNKQIRIEAESSQTYLSMACWAEVQGLEGIAQFMYTQSDEERAHMLKLVKY CCCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VNERGGHAQVTDLKAPKTTYTTFKEMFEELYNHELFVSKSINELVHITFEEKDYATHNFL HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHEEEEECCCCCHHHHHH QWYVSEQIEEEATAKSILDKINLIGDDKGGLYLFDRDIQQLTVTSSIAINPK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]