| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298527
Identifier: 146298527
GI number: 146298527
Start: 843096
End: 844691
Strand: Direct
Name: 146298527
Synonym: Fjoh_0765
Alternate gene names: NA
Gene position: 843096-844691 (Clockwise)
Preceding gene: 146298526
Following gene: 146298528
Centisome position: 13.83
GC content: 31.08
Gene sequence:
>1596_bases ATGAAAATCAATAAGATTAAAACAAATAACATTAAAAGTAATGCCTGGAAATACTGGGCATTACTCCTTTTGTTGTTTTC TTTCGTTTTTAATGTAAATGCACAAGACACCATCAAAGTGCAAAACCACATTGTTGATAATCAGATTAAAAATCAAGTTT TTAAATACCCTATTATTTATACAACTCCAAGTATAAAGGATTTTACTTTTACTGAAGTTTCTTATGAGCATCAGCAAAAT GAATTTGCCCGAAAGCAGATAGCAAACGAAGTTAATACGTATCAATTTTCAGCACAGGGATATTTTACAACAAAATCTAA ATGGAAGTTATTTGGCGATTTGACCATCAAAAAAATACTCGAAAAAAATCTGGGATTTGTACTTTCTGATGATCGTGCCG AAGAACAGGAAGTGATTACACCGCATTATTTTTATGTTCCAAGAAAAGCCAATTGGGACAATCAGGTTTATGTGTTAAAC GGCGGTTTTTCTAAAGACATTACCAATCATTTATCTGTTGCTGTTAAAGCTAATTACGGTGCCGAAAAATACAGCAGGAC TTTAGACCCAAGATCTCAAATTATCAACAGAAAACTGGGAGGAGAATTACAGCTTGGTTATCAAATTTCAAAAAATCATA AAGCATTTCTTCTAGGCAGTTATGCCGAAAACCAAAAAGATTTCAGTTATACGTATAATAATAACACTTTAAATTACGAA GCCTATCCTGAAACGTATCTTCGTTTTAATGCAGGTTATGGAAGAATTCTAAATTATTTTAAATCTATTGAAGACAGTTA TTCTTACAACTATAAAGACCTTATAGACAAAGCAGGGTTAGGATATACTTTCTCAAATAAAAAAACAATTTTTACGGCTT TGTATTACAAGCAAAATTCAAACAATATTTTTTATCCCAGCTCTTATTCTCTTAAAGAATATGAAAGAATGAAAATAAAA ACAAAAGCCAATCATGCTGAATTATTTGCTTTTCATAAATGGAATCAAAAAGAAATTCAGTCAACTTTACAGTTTGATCA AAGTGATGCCCGCAATTTTGACAAACAAAGCAATGGCTACAATTATACCAATTCATTAAGCAAAATCAATTGGACAGCGT CATTATCAAAAAAAACAGGTTCAAAAATTGATTATTTATTGGGTTTGAATATGCTTTATCAGCAAAACGAATACAATGAT ATTTTGGCCACAGCACATATTGAATTAAATTCGTTAAATACCGGAATTTACACCAGTAAGGATTTTGCTTTCAACAAAAG TAAATTAAATACTACCGTAAGTTTCAATATGTATTTCCCGCTTCCGTCAAAACTGGAATATTACGATACTTCGGGCGGCA CAAATGCCCGTTTTTTTGACGAAGTGATTTTTTATGATTATGCCGTTAATACAACCCATTATTTTGCTCCTGCATTGCGT TTGCAATACAGTTATCCAACAAAAAATAATAAAACAGTGGTTTTCTTTACCAATTTAAAAGAGAAAATCGCACTTAAAAA ACAAACTGATTATCCAGTCAGCATTAATACCAACACCACCTATTGGGTTCAAATGGGTGTACAATTAAATTATTAA
Upstream 100 bases:
>100_bases AATTGCCGGAAGAATTGTTCTTCAGGACACTAATAACTCTACAAACGATTTTGTGGAAGTAACTGCAAATCCTAGAGGAT TCAACTAAAAATTTTCTTTA
Downstream 100 bases:
>100_bases AAAATGAAAACAAAATTAATCGGCATTGGGGCAATGATAGTTTCACTCATCATGCTTTCTTATGCTAAGATTGAACCAAA CCTATCCATATCTGAATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MKINKIKTNNIKSNAWKYWALLLLLFSFVFNVNAQDTIKVQNHIVDNQIKNQVFKYPIIYTTPSIKDFTFTEVSYEHQQN EFARKQIANEVNTYQFSAQGYFTTKSKWKLFGDLTIKKILEKNLGFVLSDDRAEEQEVITPHYFYVPRKANWDNQVYVLN GGFSKDITNHLSVAVKANYGAEKYSRTLDPRSQIINRKLGGELQLGYQISKNHKAFLLGSYAENQKDFSYTYNNNTLNYE AYPETYLRFNAGYGRILNYFKSIEDSYSYNYKDLIDKAGLGYTFSNKKTIFTALYYKQNSNNIFYPSSYSLKEYERMKIK TKANHAELFAFHKWNQKEIQSTLQFDQSDARNFDKQSNGYNYTNSLSKINWTASLSKKTGSKIDYLLGLNMLYQQNEYND ILATAHIELNSLNTGIYTSKDFAFNKSKLNTTVSFNMYFPLPSKLEYYDTSGGTNARFFDEVIFYDYAVNTTHYFAPALR LQYSYPTKNNKTVVFFTNLKEKIALKKQTDYPVSINTNTTYWVQMGVQLNY
Sequences:
>Translated_531_residues MKINKIKTNNIKSNAWKYWALLLLLFSFVFNVNAQDTIKVQNHIVDNQIKNQVFKYPIIYTTPSIKDFTFTEVSYEHQQN EFARKQIANEVNTYQFSAQGYFTTKSKWKLFGDLTIKKILEKNLGFVLSDDRAEEQEVITPHYFYVPRKANWDNQVYVLN GGFSKDITNHLSVAVKANYGAEKYSRTLDPRSQIINRKLGGELQLGYQISKNHKAFLLGSYAENQKDFSYTYNNNTLNYE AYPETYLRFNAGYGRILNYFKSIEDSYSYNYKDLIDKAGLGYTFSNKKTIFTALYYKQNSNNIFYPSSYSLKEYERMKIK TKANHAELFAFHKWNQKEIQSTLQFDQSDARNFDKQSNGYNYTNSLSKINWTASLSKKTGSKIDYLLGLNMLYQQNEYND ILATAHIELNSLNTGIYTSKDFAFNKSKLNTTVSFNMYFPLPSKLEYYDTSGGTNARFFDEVIFYDYAVNTTHYFAPALR LQYSYPTKNNKTVVFFTNLKEKIALKKQTDYPVSINTNTTYWVQMGVQLNY >Mature_531_residues MKINKIKTNNIKSNAWKYWALLLLLFSFVFNVNAQDTIKVQNHIVDNQIKNQVFKYPIIYTTPSIKDFTFTEVSYEHQQN EFARKQIANEVNTYQFSAQGYFTTKSKWKLFGDLTIKKILEKNLGFVLSDDRAEEQEVITPHYFYVPRKANWDNQVYVLN GGFSKDITNHLSVAVKANYGAEKYSRTLDPRSQIINRKLGGELQLGYQISKNHKAFLLGSYAENQKDFSYTYNNNTLNYE AYPETYLRFNAGYGRILNYFKSIEDSYSYNYKDLIDKAGLGYTFSNKKTIFTALYYKQNSNNIFYPSSYSLKEYERMKIK TKANHAELFAFHKWNQKEIQSTLQFDQSDARNFDKQSNGYNYTNSLSKINWTASLSKKTGSKIDYLLGLNMLYQQNEYND ILATAHIELNSLNTGIYTSKDFAFNKSKLNTTVSFNMYFPLPSKLEYYDTSGGTNARFFDEVIFYDYAVNTTHYFAPALR LQYSYPTKNNKTVVFFTNLKEKIALKKQTDYPVSINTNTTYWVQMGVQLNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62115; Mature: 62115
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINKIKTNNIKSNAWKYWALLLLLFSFVFNVNAQDTIKVQNHIVDNQIKNQVFKYPIIY CCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHEECCEEE TTPSIKDFTFTEVSYEHQQNEFARKQIANEVNTYQFSAQGYFTTKSKWKLFGDLTIKKIL ECCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCEEEECCEEEEECCCEEEEECHHHHHHH EKNLGFVLSDDRAEEQEVITPHYFYVPRKANWDNQVYVLNGGFSKDITNHLSVAVKANYG HHCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCC AEKYSRTLDPRSQIINRKLGGELQLGYQISKNHKAFLLGSYAENQKDFSYTYNNNTLNYE HHHHHHCCCHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEECCCEEEEE AYPETYLRFNAGYGRILNYFKSIEDSYSYNYKDLIDKAGLGYTFSNKKTIFTALYYKQNS ECCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCEEEEEEEEEECC NNIFYPSSYSLKEYERMKIKTKANHAELFAFHKWNQKEIQSTLQFDQSDARNFDKQSNGY CCEECCCCCCHHHHHHEEEEECCCCEEEEEEECCCHHHHHHHHHCCCHHHHCCCCCCCCC NYTNSLSKINWTASLSKKTGSKIDYLLGLNMLYQQNEYNDILATAHIELNSLNTGIYTSK CCCCCCCEEEEEEECCCCCCCCEEHHHCCHHHCCCCCCCCEEEEEEEEEECCCCCEEECC DFAFNKSKLNTTVSFNMYFPLPSKLEYYDTSGGTNARFFDEVIFYDYAVNTTHYFAPALR CCEECCCCCEEEEEEEEEECCCCCEEEEECCCCCCCHHHHEEEEEEEEECCCEEECEEEE LQYSYPTKNNKTVVFFTNLKEKIALKKQTDYPVSINTNTTYWVQMGVQLNY EEEECCCCCCCEEEEEECCCHHHEEEECCCCCEEECCCEEEEEEEEEEECC >Mature Secondary Structure MKINKIKTNNIKSNAWKYWALLLLLFSFVFNVNAQDTIKVQNHIVDNQIKNQVFKYPIIY CCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHEECCEEE TTPSIKDFTFTEVSYEHQQNEFARKQIANEVNTYQFSAQGYFTTKSKWKLFGDLTIKKIL ECCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCEEEECCEEEEECCCEEEEECHHHHHHH EKNLGFVLSDDRAEEQEVITPHYFYVPRKANWDNQVYVLNGGFSKDITNHLSVAVKANYG HHCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCC AEKYSRTLDPRSQIINRKLGGELQLGYQISKNHKAFLLGSYAENQKDFSYTYNNNTLNYE HHHHHHCCCHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEECCCEEEEE AYPETYLRFNAGYGRILNYFKSIEDSYSYNYKDLIDKAGLGYTFSNKKTIFTALYYKQNS ECCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCEEEEEEEEEECC NNIFYPSSYSLKEYERMKIKTKANHAELFAFHKWNQKEIQSTLQFDQSDARNFDKQSNGY CCEECCCCCCHHHHHHEEEEECCCCEEEEEEECCCHHHHHHHHHCCCHHHHCCCCCCCCC NYTNSLSKINWTASLSKKTGSKIDYLLGLNMLYQQNEYNDILATAHIELNSLNTGIYTSK CCCCCCCEEEEEEECCCCCCCCEEHHHCCHHHCCCCCCCCEEEEEEEEEECCCCCEEECC DFAFNKSKLNTTVSFNMYFPLPSKLEYYDTSGGTNARFFDEVIFYDYAVNTTHYFAPALR CCEECCCCCEEEEEEEEEECCCCCEEEEECCCCCCCHHHHEEEEEEEEECCCEEECEEEE LQYSYPTKNNKTVVFFTNLKEKIALKKQTDYPVSINTNTTYWVQMGVQLNY EEEECCCCCCCEEEEEECCCHHHEEEECCCCCEEECCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA