Click here to switch to the map view.

The map label for this gene is yqhD [H]

Identifier: 146298522

GI number: 146298522

Start: 833671

End: 834828

Strand: Direct

Name: yqhD [H]

Synonym: Fjoh_0760

Alternate gene names: 146298522

Gene position: 833671-834828 (Clockwise)

Preceding gene: 146298507

Following gene: 146298524

Centisome position: 13.67

GC content: 36.61

Gene sequence:

>1158_bases
ATGCTAAACTTTGAATTATACAATCCGACAAACTTAGTTTTCGGGAAAGGACAAATTGAAAAACTTTCGACTTTGGTTCC
AAAAGACGCAAAAATTCTTTTGGCTTACGGCGGTGGAAGTATTTTTAAAAACGGAATTTACGATCAGGTAATTACAGCTT
TAAAAGGCTTTAATATTGTGGAATTTGGCGGAATCGAACCAAACCCAAGATTTGAGACTTTAATGAAAGCGGTCGACGTT
ATTAAAGCTGAAAAAATCGACTTTATTTTGGCTGTTGGCGGCGGATCTGTGATTGATGGTGTGAAATTTATTTCGGGCGC
TGTTCATTTTGAAGGCAACCCAATTGATATTTTACAGAAACGTATTTTGATTAAAGAAAATGCGATGCCGTTTGGAACTG
TATTAACACTTCCGGCAACGGGAAGTGAAATGAACTCTGGATATGTAGTAACGATTGAAGCAACTCAGGAAAAATTATCT
TCTGGCGGAAGTGCTTTGTTTCCTCAATTCTCAATTTGTGACCCAGCAGTTATAGCTTCTTTACCAAAAAGACAAATCGA
AAATGGTGTTGTAGATGCTTATACACACGTTATGGAACAATACTTAACGTATCCGCATGATGCTTTTTTACAAGATAGAA
TTGCCGAAGGAATTTTACAGACTCTAATTGAAGTTGGTCCTGGAATTGTAAAAAATCCAACTGATTATACTTTGGCTTCA
AACTTTATGTGGAGTTGTACAATGGCTTTAAATGGGTTAATTCAAAAAGGTGTTCCAAGTGACTGGGCAACTCACATGAT
TGGCCACGAATTGACAGCACTTTACGAAATTGACCATGCGAGAACTTTAGCTATTATTGGCCCAAGTTTGTACCATGTAA
TGTTTGAAACTAAAAAAGGCAAACTGGCACAATACGGAAGAAGAATATTCAACTTGACTGGTTCTGACGAAGAAGTAGCA
AAAGAAGCCATCAACAAAACGGTTGAGTTTTTCCATACTATGGGAATGGACACAAAACTTTCACAATACACAGAAGATTA
CAGCAAAACAGCAGATTTTATAGTAAATCGTTTTGACGAAAGAGGCTGGAAAGGTCTTGGTGAAAATCAATTAGTGACTT
TAGATAAGGTGAAATCTATTGTGGAACTTTCTTATTAG

Upstream 100 bases:

>100_bases
TTAAAAAATTAAACAAACAACAATGCTAGACTGCAGATAAGTTCAAAGAAAAAAAACTTAGAACCTTAGCAGCTTAGTAT
CTTAGAAACTCTAAAAAAAA

Downstream 100 bases:

>100_bases
TCACAATATTCAGTCTCAGTTTGCGGTTTTTGCATATCACTGAAAACTGTTAACGGGTGACTGCAAACAAAAAAAGGCGT
TCTTATAAAAAATAGGAACG

Product: iron-containing alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MLNFELYNPTNLVFGKGQIEKLSTLVPKDAKILLAYGGGSIFKNGIYDQVITALKGFNIVEFGGIEPNPRFETLMKAVDV
IKAEKIDFILAVGGGSVIDGVKFISGAVHFEGNPIDILQKRILIKENAMPFGTVLTLPATGSEMNSGYVVTIEATQEKLS
SGGSALFPQFSICDPAVIASLPKRQIENGVVDAYTHVMEQYLTYPHDAFLQDRIAEGILQTLIEVGPGIVKNPTDYTLAS
NFMWSCTMALNGLIQKGVPSDWATHMIGHELTALYEIDHARTLAIIGPSLYHVMFETKKGKLAQYGRRIFNLTGSDEEVA
KEAINKTVEFFHTMGMDTKLSQYTEDYSKTADFIVNRFDERGWKGLGENQLVTLDKVKSIVELSY

Sequences:

>Translated_385_residues
MLNFELYNPTNLVFGKGQIEKLSTLVPKDAKILLAYGGGSIFKNGIYDQVITALKGFNIVEFGGIEPNPRFETLMKAVDV
IKAEKIDFILAVGGGSVIDGVKFISGAVHFEGNPIDILQKRILIKENAMPFGTVLTLPATGSEMNSGYVVTIEATQEKLS
SGGSALFPQFSICDPAVIASLPKRQIENGVVDAYTHVMEQYLTYPHDAFLQDRIAEGILQTLIEVGPGIVKNPTDYTLAS
NFMWSCTMALNGLIQKGVPSDWATHMIGHELTALYEIDHARTLAIIGPSLYHVMFETKKGKLAQYGRRIFNLTGSDEEVA
KEAINKTVEFFHTMGMDTKLSQYTEDYSKTADFIVNRFDERGWKGLGENQLVTLDKVKSIVELSY
>Mature_385_residues
MLNFELYNPTNLVFGKGQIEKLSTLVPKDAKILLAYGGGSIFKNGIYDQVITALKGFNIVEFGGIEPNPRFETLMKAVDV
IKAEKIDFILAVGGGSVIDGVKFISGAVHFEGNPIDILQKRILIKENAMPFGTVLTLPATGSEMNSGYVVTIEATQEKLS
SGGSALFPQFSICDPAVIASLPKRQIENGVVDAYTHVMEQYLTYPHDAFLQDRIAEGILQTLIEVGPGIVKNPTDYTLAS
NFMWSCTMALNGLIQKGVPSDWATHMIGHELTALYEIDHARTLAIIGPSLYHVMFETKKGKLAQYGRRIFNLTGSDEEVA
KEAINKTVEFFHTMGMDTKLSQYTEDYSKTADFIVNRFDERGWKGLGENQLVTLDKVKSIVELSY

Specific function: NADP-dependent ADH activity [H]

COG id: COG1979

COG function: function code C; Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1789386, Length=387, Percent_Identity=49.8708010335917, Blast_Score=386, Evalue=1e-108,
Organism=Escherichia coli, GI1787493, Length=323, Percent_Identity=27.8637770897833, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI48994951, Length=295, Percent_Identity=24.406779661017, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI87082107, Length=278, Percent_Identity=22.6618705035971, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321181, Length=359, Percent_Identity=22.2841225626741, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670
- InterPro:   IPR018211 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: 1.1.-.- [C]

Molecular weight: Translated: 42482; Mature: 42482

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS00060 ADH_IRON_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFELYNPTNLVFGKGQIEKLSTLVPKDAKILLAYGGGSIFKNGIYDQVITALKGFNIV
CCEEEEECCCEEEECCCHHHHHHHHCCCCCEEEEEECCCHHHHCCHHHHHHHHHCCCCEE
EFGGIEPNPRFETLMKAVDVIKAEKIDFILAVGGGSVIDGVKFISGAVHFEGNPIDILQK
EECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCEEEECCCCHHHHHH
RILIKENAMPFGTVLTLPATGSEMNSGYVVTIEATQEKLSSGGSALFPQFSICDPAVIAS
HHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCHHHHHH
LPKRQIENGVVDAYTHVMEQYLTYPHDAFLQDRIAEGILQTLIEVGPGIVKNPTDYTLAS
CCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
NFMWSCTMALNGLIQKGVPSDWATHMIGHELTALYEIDHARTLAIIGPSLYHVMFETKKG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCEEEEECHHHEEHEEECCCC
KLAQYGRRIFNLTGSDEEVAKEAINKTVEFFHTMGMDTKLSQYTEDYSKTADFIVNRFDE
HHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
RGWKGLGENQLVTLDKVKSIVELSY
HCCCCCCCCCEEEHHHHHHHHHCCC
>Mature Secondary Structure
MLNFELYNPTNLVFGKGQIEKLSTLVPKDAKILLAYGGGSIFKNGIYDQVITALKGFNIV
CCEEEEECCCEEEECCCHHHHHHHHCCCCCEEEEEECCCHHHHCCHHHHHHHHHCCCCEE
EFGGIEPNPRFETLMKAVDVIKAEKIDFILAVGGGSVIDGVKFISGAVHFEGNPIDILQK
EECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCEEEECCCCHHHHHH
RILIKENAMPFGTVLTLPATGSEMNSGYVVTIEATQEKLSSGGSALFPQFSICDPAVIAS
HHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCHHHHHH
LPKRQIENGVVDAYTHVMEQYLTYPHDAFLQDRIAEGILQTLIEVGPGIVKNPTDYTLAS
CCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
NFMWSCTMALNGLIQKGVPSDWATHMIGHELTALYEIDHARTLAIIGPSLYHVMFETKKG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCEEEEECHHHEEHEEECCCC
KLAQYGRRIFNLTGSDEEVAKEAINKTVEFFHTMGMDTKLSQYTEDYSKTADFIVNRFDE
HHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
RGWKGLGENQLVTLDKVKSIVELSY
HCCCCCCCCCEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]