Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146298481

Identifier: 146298481

GI number: 146298481

Start: 791292

End: 792923

Strand: Direct

Name: 146298481

Synonym: Fjoh_0718

Alternate gene names: NA

Gene position: 791292-792923 (Clockwise)

Preceding gene: 146298480

Following gene: 146298482

Centisome position: 12.98

GC content: 32.72

Gene sequence:

>1632_bases
ATGAAATTAAAGTTTTACATCTTTTTATTTTTGCTTTCTTCAGCTGTTTTTGCTCAAAAACAAGTTGAAACTAGTATTGA
TACAACAAAAAATAAAATTGGAGCCGAATTTAAGCTGACTCTTAAAACGGTTGTAAATGCTAATTCAAAAGTTGTTTTCC
CAAAAGACAAAAGATTCGGAGCGCTGGAAGTAATTCAGTCTTATCCTGTTGATACCGTTAAAAAAGACGGCAGTTATGAA
TTAATCAAAAAGTATGGATTAACACAATTTGATTCAGGAAGATATGTAATACCGAGTGTAAAGATTCTTATTGATAAAAA
AACTTATTTCTCAGATTCTATTCGTGTAGAAGTTGCTAATGTAAAAGTCGATACTTTACAGCAAAAAATGTATGACATCA
AAGACATTACCCCTGCAGAAGATGGTATTGGCGACTGGTGGAAATATGTTTTGGCATTAGTTATAATTCTTGCAATTGGT
GCGGGAATTTATTGGTATGTTAAAAAACATCAGAAAAAGAAAATAGAAGAAGAAGTTTATAAAACACCTATTGAAAAAGC
AACAAGCCTGCTGAACAATTTGGAGCAAAAAGAGCTGGTTCAAAAAGGAGAAATTAAAGAATACTACAGCGAATTAACAG
ATATTGCCCGTAACTATATTGAAGAAGCAATTCATATTCCGGCAATGGAAAGTACAACTTCTGAATTGATTCAGGCAATC
AGAACTGCTTCAACTAAAAAGAAAATGACTTTAACGCCGGAAACGGTAGAAAATCTGGAACGTGTTTTACGTCAGGCCGA
CTTAGTAAAATTTGCTAAATCGAAACCGCTTGACTTTGAAATTACAGAAGACCGAAATAAAATTCAGAAAGTAATTTTAA
CGCTTGATAACGCGATTCCAACTGAAGTTCCGGCTGAAGAAGAAGATCAGTTATTAAACGAAGCTCAAAAACAAAAGCAA
ATTCAGCTTCAGTTAAAAAAACAAAGAAACAAGCGAATTGCAATTGCCGTTGGTTCAGTTATCTTTTTATTATTAGCAAC
TACAACTTTCTTTGTTGCTACAAAAGGTTTTGCATACGTAAAAGACAATGTTATTGGTCATCCGTCTAAAGAATTATTAG
AAGGAGAATGGGTAAAAAGTGAATACGGAAATCCTGGTGTAATTATCGAAACTCCAAAGGTTTTAAAACGTATGGATGCC
TTAAAAGCACTTCCAAAAGAAACAATGGCTTTAATTAAGGAAATGCAGCTTTTTGTTTATGGAAGTATGATTGATAATTT
TTATGTAGCCGTTTCGACTACTAAATTCAAAAATCCAACTGACATTGATTTATCTAAAGCTTTAGAAGGAAGCTTAAAAG
TAATTGAACTTCAAGGCGGACAAAATATCATTGTAAAACAGGAAAATTTCCAAACAAATCAAGGTATTCAGGGAGTAAAA
GGTTACGGAACCATGAGCATTTTAAACCCTACAACGAAAACAAGTACAAAGGCATATTATGAAATCCTGCTTTTTAAACA
AGATCAGGGATTACAGCAAATCATCATTTTACATGAAGAAGGCGACACGTATGCTAACGATATTACAACCCGAATTTTAA
ATTCTGTTGAACTTAAAAAAGCAAGTAACTAA

Upstream 100 bases:

>100_bases
TTAAAACATCAAAAAATAATCCATAAAAAACAAAGATTACGATTTAAGTTTCATAATAAATCTGAAATCAAAAATCGTTA
ATCTTCAATCGTTAATCATA

Downstream 100 bases:

>100_bases
TGAATAATAAGATCACTTTTTTAAATCCGGAATTCTTTTGGTTGTTTCTATTAATTCCAATTGTCATTGGATGGTTTTTC
TGGAAAAGAAACCAGCAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MKLKFYIFLFLLSSAVFAQKQVETSIDTTKNKIGAEFKLTLKTVVNANSKVVFPKDKRFGALEVIQSYPVDTVKKDGSYE
LIKKYGLTQFDSGRYVIPSVKILIDKKTYFSDSIRVEVANVKVDTLQQKMYDIKDITPAEDGIGDWWKYVLALVIILAIG
AGIYWYVKKHQKKKIEEEVYKTPIEKATSLLNNLEQKELVQKGEIKEYYSELTDIARNYIEEAIHIPAMESTTSELIQAI
RTASTKKKMTLTPETVENLERVLRQADLVKFAKSKPLDFEITEDRNKIQKVILTLDNAIPTEVPAEEEDQLLNEAQKQKQ
IQLQLKKQRNKRIAIAVGSVIFLLLATTTFFVATKGFAYVKDNVIGHPSKELLEGEWVKSEYGNPGVIIETPKVLKRMDA
LKALPKETMALIKEMQLFVYGSMIDNFYVAVSTTKFKNPTDIDLSKALEGSLKVIELQGGQNIIVKQENFQTNQGIQGVK
GYGTMSILNPTTKTSTKAYYEILLFKQDQGLQQIIILHEEGDTYANDITTRILNSVELKKASN

Sequences:

>Translated_543_residues
MKLKFYIFLFLLSSAVFAQKQVETSIDTTKNKIGAEFKLTLKTVVNANSKVVFPKDKRFGALEVIQSYPVDTVKKDGSYE
LIKKYGLTQFDSGRYVIPSVKILIDKKTYFSDSIRVEVANVKVDTLQQKMYDIKDITPAEDGIGDWWKYVLALVIILAIG
AGIYWYVKKHQKKKIEEEVYKTPIEKATSLLNNLEQKELVQKGEIKEYYSELTDIARNYIEEAIHIPAMESTTSELIQAI
RTASTKKKMTLTPETVENLERVLRQADLVKFAKSKPLDFEITEDRNKIQKVILTLDNAIPTEVPAEEEDQLLNEAQKQKQ
IQLQLKKQRNKRIAIAVGSVIFLLLATTTFFVATKGFAYVKDNVIGHPSKELLEGEWVKSEYGNPGVIIETPKVLKRMDA
LKALPKETMALIKEMQLFVYGSMIDNFYVAVSTTKFKNPTDIDLSKALEGSLKVIELQGGQNIIVKQENFQTNQGIQGVK
GYGTMSILNPTTKTSTKAYYEILLFKQDQGLQQIIILHEEGDTYANDITTRILNSVELKKASN
>Mature_543_residues
MKLKFYIFLFLLSSAVFAQKQVETSIDTTKNKIGAEFKLTLKTVVNANSKVVFPKDKRFGALEVIQSYPVDTVKKDGSYE
LIKKYGLTQFDSGRYVIPSVKILIDKKTYFSDSIRVEVANVKVDTLQQKMYDIKDITPAEDGIGDWWKYVLALVIILAIG
AGIYWYVKKHQKKKIEEEVYKTPIEKATSLLNNLEQKELVQKGEIKEYYSELTDIARNYIEEAIHIPAMESTTSELIQAI
RTASTKKKMTLTPETVENLERVLRQADLVKFAKSKPLDFEITEDRNKIQKVILTLDNAIPTEVPAEEEDQLLNEAQKQKQ
IQLQLKKQRNKRIAIAVGSVIFLLLATTTFFVATKGFAYVKDNVIGHPSKELLEGEWVKSEYGNPGVIIETPKVLKRMDA
LKALPKETMALIKEMQLFVYGSMIDNFYVAVSTTKFKNPTDIDLSKALEGSLKVIELQGGQNIIVKQENFQTNQGIQGVK
GYGTMSILNPTTKTSTKAYYEILLFKQDQGLQQIIILHEEGDTYANDITTRILNSVELKKASN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61574; Mature: 61574

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKFYIFLFLLSSAVFAQKQVETSIDTTKNKIGAEFKLTLKTVVNANSKVVFPKDKRFG
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCEEECCCCCCCC
ALEVIQSYPVDTVKKDGSYELIKKYGLTQFDSGRYVIPSVKILIDKKTYFSDSIRVEVAN
HHHHHHHCCCHHHCCCCCHHHHHHCCCCEECCCCEECCEEEEEEECCHHCCCCEEEEEEC
VKVDTLQQKMYDIKDITPAEDGIGDWWKYVLALVIILAIGAGIYWYVKKHQKKKIEEEVY
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH
KTPIEKATSLLNNLEQKELVQKGEIKEYYSELTDIARNYIEEAIHIPAMESTTSELIQAI
HCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RTASTKKKMTLTPETVENLERVLRQADLVKFAKSKPLDFEITEDRNKIQKVILTLDNAIP
HHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCC
TEVPAEEEDQLLNEAQKQKQIQLQLKKQRNKRIAIAVGSVIFLLLATTTFFVATKGFAYV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEE
KDNVIGHPSKELLEGEWVKSEYGNPGVIIETPKVLKRMDALKALPKETMALIKEMQLFVY
ECCCCCCCHHHHHCCCHHHHCCCCCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GSMIDNFYVAVSTTKFKNPTDIDLSKALEGSLKVIELQGGQNIIVKQENFQTNQGIQGVK
HHHHCCEEEEEEEECCCCCCCCCHHHHCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCC
GYGTMSILNPTTKTSTKAYYEILLFKQDQGLQQIIILHEEGDTYANDITTRILNSVELKK
CCCEEEEECCCCCCCHHEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHC
ASN
CCC
>Mature Secondary Structure
MKLKFYIFLFLLSSAVFAQKQVETSIDTTKNKIGAEFKLTLKTVVNANSKVVFPKDKRFG
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCEEECCCCCCCC
ALEVIQSYPVDTVKKDGSYELIKKYGLTQFDSGRYVIPSVKILIDKKTYFSDSIRVEVAN
HHHHHHHCCCHHHCCCCCHHHHHHCCCCEECCCCEECCEEEEEEECCHHCCCCEEEEEEC
VKVDTLQQKMYDIKDITPAEDGIGDWWKYVLALVIILAIGAGIYWYVKKHQKKKIEEEVY
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH
KTPIEKATSLLNNLEQKELVQKGEIKEYYSELTDIARNYIEEAIHIPAMESTTSELIQAI
HCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RTASTKKKMTLTPETVENLERVLRQADLVKFAKSKPLDFEITEDRNKIQKVILTLDNAIP
HHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCC
TEVPAEEEDQLLNEAQKQKQIQLQLKKQRNKRIAIAVGSVIFLLLATTTFFVATKGFAYV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEE
KDNVIGHPSKELLEGEWVKSEYGNPGVIIETPKVLKRMDALKALPKETMALIKEMQLFVY
ECCCCCCCHHHHHCCCHHHHCCCCCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GSMIDNFYVAVSTTKFKNPTDIDLSKALEGSLKVIELQGGQNIIVKQENFQTNQGIQGVK
HHHHCCEEEEEEEECCCCCCCCCHHHHCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCC
GYGTMSILNPTTKTSTKAYYEILLFKQDQGLQQIIILHEEGDTYANDITTRILNSVELKK
CCCEEEEECCCCCCCHHEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHC
ASN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA