| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298420
Identifier: 146298420
GI number: 146298420
Start: 715554
End: 716504
Strand: Direct
Name: 146298420
Synonym: Fjoh_0657
Alternate gene names: NA
Gene position: 715554-716504 (Clockwise)
Preceding gene: 146298415
Following gene: 146298421
Centisome position: 11.74
GC content: 25.34
Gene sequence:
>951_bases ATGGATAGCATAGAAATTGTTCTTAAAAAAGATAACAACAATAGAGATATTGACTTAGACAATATGCCTATTGGCGCTAC CGAGTCATTAAAAAATATCTTAGAATCTCTAATTGAGATTGCTCGTTATGAAAAAACTATAAATAATATTGACTTAAATA TTGGTGTAAAAAGTGGTAGTGCATGCGAAATGTTAATCGGCACTCCAGATAACTTAAAAGTTGTATATAATAAAATTGAG GATGTAGTTAACAACAAACCATCACGAGATAATTTTTACGTAAAAAATCTAAATATTATTAGAAATAATATTCACGAAAA AAAAGACGCAAAAATATTCTATCTAAAAGATAACTCAAGAACAGAAATTACAAATCTTTTTGATAAAAGCTTTAAAGAAA AAAGAGAAAAAGATAAAACTCTAAATTATTTTGAAGTTGAGTTTATTAAAGGAAAATTACTGCAGAACGGAGGAACTAAT CCTAATTTTCATCTTCAAATACCTGCTGGAATAATTACAATTGATTGTACAGAAGAGGAAGCTCAAAAAGTGAATTATTT ATATCAGGAGATTTATATATCTGCCTGGGTAGATAAAAAGAAAAAAGGAAAAAGGGTATATAGATTTTGTGATTTTTATA TGACCGATTCTGCAAAACAACATTTCATAGATTTTGAAAAATTCTTTAAAGAAATATCAACCTTGAAAGGAACAGAACCT CTACATAGAATTAGCTCAAAATTAGAAAGCTTTTACAATATTAAAGATTTTGAAAACGCTTCTAAATTTTTAAGAATTTT CAACAATAAAGAAGTTAATCCAAATTATTTGAAAACAATACTTGTTCTGTCAAAAAATATTGATAAAAATATCGACTCTG TAAAAAACAAAATCTTTGTTGATACTTTAAAAAATTTAAACCAATTGTTAAATAAAAAAATTAGAAAATAG
Upstream 100 bases:
>100_bases TAAAAGTTTAAATGTATATTTGAAACGTAAATTCGCACAAAAACACCAGCAAAATCACTAATTATCAGCATTTTGTATTT ATAACAAACAAAAAAAAGCA
Downstream 100 bases:
>100_bases TAAAATGGCAAAATTATTAAATCACAAAACTATTCTATCTAAGATTTTTAATATTTCAGAAATTAGTACAGAGGAAGATT TTGTAGCATGCACTACTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MDSIEIVLKKDNNNRDIDLDNMPIGATESLKNILESLIEIARYEKTINNIDLNIGVKSGSACEMLIGTPDNLKVVYNKIE DVVNNKPSRDNFYVKNLNIIRNNIHEKKDAKIFYLKDNSRTEITNLFDKSFKEKREKDKTLNYFEVEFIKGKLLQNGGTN PNFHLQIPAGIITIDCTEEEAQKVNYLYQEIYISAWVDKKKKGKRVYRFCDFYMTDSAKQHFIDFEKFFKEISTLKGTEP LHRISSKLESFYNIKDFENASKFLRIFNNKEVNPNYLKTILVLSKNIDKNIDSVKNKIFVDTLKNLNQLLNKKIRK
Sequences:
>Translated_316_residues MDSIEIVLKKDNNNRDIDLDNMPIGATESLKNILESLIEIARYEKTINNIDLNIGVKSGSACEMLIGTPDNLKVVYNKIE DVVNNKPSRDNFYVKNLNIIRNNIHEKKDAKIFYLKDNSRTEITNLFDKSFKEKREKDKTLNYFEVEFIKGKLLQNGGTN PNFHLQIPAGIITIDCTEEEAQKVNYLYQEIYISAWVDKKKKGKRVYRFCDFYMTDSAKQHFIDFEKFFKEISTLKGTEP LHRISSKLESFYNIKDFENASKFLRIFNNKEVNPNYLKTILVLSKNIDKNIDSVKNKIFVDTLKNLNQLLNKKIRK >Mature_316_residues MDSIEIVLKKDNNNRDIDLDNMPIGATESLKNILESLIEIARYEKTINNIDLNIGVKSGSACEMLIGTPDNLKVVYNKIE DVVNNKPSRDNFYVKNLNIIRNNIHEKKDAKIFYLKDNSRTEITNLFDKSFKEKREKDKTLNYFEVEFIKGKLLQNGGTN PNFHLQIPAGIITIDCTEEEAQKVNYLYQEIYISAWVDKKKKGKRVYRFCDFYMTDSAKQHFIDFEKFFKEISTLKGTEP LHRISSKLESFYNIKDFENASKFLRIFNNKEVNPNYLKTILVLSKNIDKNIDSVKNKIFVDTLKNLNQLLNKKIRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36978; Mature: 36978
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSIEIVLKKDNNNRDIDLDNMPIGATESLKNILESLIEIARYEKTINNIDLNIGVKSGS CCCEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC ACEMLIGTPDNLKVVYNKIEDVVNNKPSRDNFYVKNLNIIRNNIHEKKDAKIFYLKDNSR CEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCCCCEEEEEECCCC TEITNLFDKSFKEKREKDKTLNYFEVEFIKGKLLQNGGTNPNFHLQIPAGIITIDCTEEE HHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCCCCCCEEEEECCCEEEEECCHHH AQKVNYLYQEIYISAWVDKKKKGKRVYRFCDFYMTDSAKQHFIDFEKFFKEISTLKGTEP HHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCH LHRISSKLESFYNIKDFENASKFLRIFNNKEVNPNYLKTILVLSKNIDKNIDSVKNKIFV HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH DTLKNLNQLLNKKIRK HHHHHHHHHHHHHHCC >Mature Secondary Structure MDSIEIVLKKDNNNRDIDLDNMPIGATESLKNILESLIEIARYEKTINNIDLNIGVKSGS CCCEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC ACEMLIGTPDNLKVVYNKIEDVVNNKPSRDNFYVKNLNIIRNNIHEKKDAKIFYLKDNSR CEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCCCCEEEEEECCCC TEITNLFDKSFKEKREKDKTLNYFEVEFIKGKLLQNGGTNPNFHLQIPAGIITIDCTEEE HHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCCCCCCEEEEECCCEEEEECCHHH AQKVNYLYQEIYISAWVDKKKKGKRVYRFCDFYMTDSAKQHFIDFEKFFKEISTLKGTEP HHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCH LHRISSKLESFYNIKDFENASKFLRIFNNKEVNPNYLKTILVLSKNIDKNIDSVKNKIFV HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH DTLKNLNQLLNKKIRK HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA