| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298387
Identifier: 146298387
GI number: 146298387
Start: 685671
End: 686600
Strand: Direct
Name: 146298387
Synonym: Fjoh_0624
Alternate gene names: NA
Gene position: 685671-686600 (Clockwise)
Preceding gene: 146298386
Following gene: 146298388
Centisome position: 11.25
GC content: 31.51
Gene sequence:
>930_bases ATGAGTCAGAGTAAAAAAATAATATTGCGAATCTATTTCATGATCTGTGTACTTTTTGTGCTGAACTGTCTGTTATATTA TTTTAAAGAAATCAGTCTTCGCGGCTATTACAGCGATGTCGTTTTATCATGGCTCTGGCTGATAAGCAGTTTTGTAATTA TTATCGTTTTTTGGAAAAAGCTCTTAGCAAAACTCTTTTTGACAGCATTACTCATAACATTTGCAATGAGTATTATTGCT ATGATGCTTCCTTTTTATACTTTATTACTTTCGAGCACATCTTTAGGTTTATACCAAAATAAAGATCTTAACAAAAATTA CAGAGCACAAATTGTAGGCTACGGTGTTATGGTTAATCCGTGGCTTGAAGTAATTGAGAAAAAAGGTTTATTTGAAAAAA GAATTATCAAATGCACCGATTCTGAGCTTATGGATGACAATCTGGATATCAAAATCAGAACAGCAAAAGATATTATTTTT AAAAGTGAAACCGACAGTACCATTACGCTGGCTTTGTTTTACGGCGGACCAAACAAAACTATTACTTTCGATAAAAAAAC AGGAAATATTGTATCGCAAATGCTCAATATAAAGGGACTGACTCAAAAATATGGCGGAACATGGTACGATGAAACCCAAA AATTGTATCTCACTTTTTATTTTGAAGAAGGATATGATTATGCAACCTTAAACACCTGGACTGGCAGCATAGATAAAAAA GAGAATATTGAAGCTTATAAAGCTTTTATAAAAGACAATAAATTAATCCTGCCTGCAGAAAACAGCGATCACCACGCACC TTATTGTGAAATAGATATTCAATACAATTTATTGGTTTACAAATGCAATGAGGGATTTAATTTTTCTGATAATTTCCTAA ACACAAAAAAAACAATTTCTGTAACAAAATATAAACGCATAACAGATTAA
Upstream 100 bases:
>100_bases TTAAAGAAGAATTGCTTTATACACTTTCATTATCATTTCTGCCTATTTGGGTTTTATCAATAGTTACTGTATTTACTTTA CATTATATCTTAAAAAAATT
Downstream 100 bases:
>100_bases TTCTTCTTACAAATTGTAAATTTTCTATCTTGTACAACCTTTATTAAACCCCAATTTAATTTATGAAAATAAAACTATAC GCCCTTTCTACAGTTCTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSQSKKIILRIYFMICVLFVLNCLLYYFKEISLRGYYSDVVLSWLWLISSFVIIIVFWKKLLAKLFLTALLITFAMSIIA MMLPFYTLLLSSTSLGLYQNKDLNKNYRAQIVGYGVMVNPWLEVIEKKGLFEKRIIKCTDSELMDDNLDIKIRTAKDIIF KSETDSTITLALFYGGPNKTITFDKKTGNIVSQMLNIKGLTQKYGGTWYDETQKLYLTFYFEEGYDYATLNTWTGSIDKK ENIEAYKAFIKDNKLILPAENSDHHAPYCEIDIQYNLLVYKCNEGFNFSDNFLNTKKTISVTKYKRITD
Sequences:
>Translated_309_residues MSQSKKIILRIYFMICVLFVLNCLLYYFKEISLRGYYSDVVLSWLWLISSFVIIIVFWKKLLAKLFLTALLITFAMSIIA MMLPFYTLLLSSTSLGLYQNKDLNKNYRAQIVGYGVMVNPWLEVIEKKGLFEKRIIKCTDSELMDDNLDIKIRTAKDIIF KSETDSTITLALFYGGPNKTITFDKKTGNIVSQMLNIKGLTQKYGGTWYDETQKLYLTFYFEEGYDYATLNTWTGSIDKK ENIEAYKAFIKDNKLILPAENSDHHAPYCEIDIQYNLLVYKCNEGFNFSDNFLNTKKTISVTKYKRITD >Mature_308_residues SQSKKIILRIYFMICVLFVLNCLLYYFKEISLRGYYSDVVLSWLWLISSFVIIIVFWKKLLAKLFLTALLITFAMSIIAM MLPFYTLLLSSTSLGLYQNKDLNKNYRAQIVGYGVMVNPWLEVIEKKGLFEKRIIKCTDSELMDDNLDIKIRTAKDIIFK SETDSTITLALFYGGPNKTITFDKKTGNIVSQMLNIKGLTQKYGGTWYDETQKLYLTFYFEEGYDYATLNTWTGSIDKKE NIEAYKAFIKDNKLILPAENSDHHAPYCEIDIQYNLLVYKCNEGFNFSDNFLNTKKTISVTKYKRITD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36004; Mature: 35872
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSKKIILRIYFMICVLFVLNCLLYYFKEISLRGYYSDVVLSWLWLISSFVIIIVFWKK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLAKLFLTALLITFAMSIIAMMLPFYTLLLSSTSLGLYQNKDLNKNYRAQIVGYGVMVNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEECEEEHH WLEVIEKKGLFEKRIIKCTDSELMDDNLDIKIRTAKDIIFKSETDSTITLALFYGGPNKT HHHHHHHCCCHHHHHHCCCCCHHCCCCCCEEEEEHHEEEEECCCCCEEEEEEEECCCCCE ITFDKKTGNIVSQMLNIKGLTQKYGGTWYDETQKLYLTFYFEEGYDYATLNTWTGSIDKK EEEECCCHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCC ENIEAYKAFIKDNKLILPAENSDHHAPYCEIDIQYNLLVYKCNEGFNFSDNFLNTKKTIS CCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEE VTKYKRITD EEHEEECCC >Mature Secondary Structure SQSKKIILRIYFMICVLFVLNCLLYYFKEISLRGYYSDVVLSWLWLISSFVIIIVFWKK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLAKLFLTALLITFAMSIIAMMLPFYTLLLSSTSLGLYQNKDLNKNYRAQIVGYGVMVNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEECEEEHH WLEVIEKKGLFEKRIIKCTDSELMDDNLDIKIRTAKDIIFKSETDSTITLALFYGGPNKT HHHHHHHCCCHHHHHHCCCCCHHCCCCCCEEEEEHHEEEEECCCCCEEEEEEEECCCCCE ITFDKKTGNIVSQMLNIKGLTQKYGGTWYDETQKLYLTFYFEEGYDYATLNTWTGSIDKK EEEECCCHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCC ENIEAYKAFIKDNKLILPAENSDHHAPYCEIDIQYNLLVYKCNEGFNFSDNFLNTKKTIS CCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEE VTKYKRITD EEHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA