| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is zraS [C]
Identifier: 146284495
GI number: 146284495
Start: 4537784
End: 4540189
Strand: Direct
Name: zraS [C]
Synonym: PST_4184
Alternate gene names: 146284495
Gene position: 4537784-4540189 (Clockwise)
Preceding gene: 146284494
Following gene: 146284496
Centisome position: 99.35
GC content: 66.33
Gene sequence:
>2406_bases ATGCCAGCGTCAAAGAACATCAGTGTCCTGTTCATCGAGGACAGCCGGCATGATGCCGAACTGGCCCAGCTGGCGCTGGA GCGCAGTGGCTACACCTTGCAGACGGAGCTGGTCTACAACCACGCCGGGGTGGTCGAAGCGTTACAGCGACGCCGCTTCG ATCTGATCCTGGCGGATTTCATCCTGCCCGGTTTCTCCGGCAGCCAGGCGCTGCAGGAGGCCCGAAGGCTCGCCCCGCAG ACCCCCTTCATTTTCCTTTCCGGCGTATTCGGCGAAGAGCACGCGGTAAACATGATGCGCTCCGGCGCCGTCGACTACGT GCTAAAGCAGAACCTCGGCTTTCTGCCCAAGGCCGTGGAACGAGCGTTGGGCGAGGTCAACGAGCGCCGCCGGCGCCTGC AGGCCGAACAGGCGCTGCGCGAGGTGGAAGTGCGCGCGCGCCTGGCGATCGATGCCGCGCGGCTGGGCATGTGGGACTAC GAGCCGCAGAGCGGCACCCTGATCTGGGACGAACGCTGTCGCAGCATGCTCGGCCTCGATACGGAGGCGCCGGTGAGCAT GGGGCTGTTCGAGCAACTCCTGCACCCCGAGGATCGCGAGCGGATTCACGACGAAGTGATCCGCGCCATCTCCGGCGAGG ATGCCGGCGAGTTCTGCACCTGTTATCGCGTGGTGTTCGGCGACGGCAGCATTCGCTGGATGGAGACCCGCGGCCAGGCC TTCTTCGAGAGCGGTCAGTGCACGCGCTTCGTCGGTGTGGTCATGGACATCACCGAGCAGCAGCTGACTACCCAGAGTCT GCGACAGATCAACGAAACCCTGGGCGAGCGGGTCGAGGAGCGCACCCGCGAACGCGACCGGACCTGGGAGCTCTCCCGCG ACCTGCTCGCCGTCACCGAGCTGGACATGCTGCCGGTGGCGCTCAATCCGTTCTGGGAGAACGCGCTCGGCTGGTCATAC AGCGAACTGATGCAACGGCCTTTGACCCAGCTGGTGCATCCCGACGATCTGCAGGCGACGCTGGAAGAGAACGCCAATGT CGGCCGCGGCAAGGTCACCAACCGCTTCGTCAACCGCATGCGCCACCGCGACGGCAGCTACCGCTGGCTGTCGTGGTCGG CCGTGGCCGATGGCGGACGCATCTATTCGGCGGCGCGTGACATCACCAGCGAAATCGCCGCGGTGGACAAGCTGGCCGAG GCCAACCGCGAGCTGCGTGCGCAGATTCAGGAGCGCGAGCGGGTCGAAGCCACCCTGCAGCAGATGCAGCGCCTGGAAGC GGTGGGTCAGCTGACCGCCGGGGTCGCCCACGATTTCAACAACCTGCTCACCGTCATTCTCACCAGTGCCAGCTTCCTGA AGAACGATCTGGAGCAGGGCGCACCGCTTGAACGCAGCCTGCGTCGATTGCAGTACATCCGCGAGTCCGGCGAACGCGGC GCCACCCTCACCGGCCAGCTGCTTGCCTTCGCCCGCCGCCAGCAGCTGGCACCCACCGCCATCGACCTCAACGACACCCT GGTCAGCCTGCTCAGCCTGCTGAAGAGCACGCTCGGCGGCAGCGTCAGCATCGAGACCGATACCCAGGCGGACATCTGGC ATGCGCTGGTCGACCCGACCCAGATCGAGATGATCATTCTCAACCTGGCGATCAACGCCCGCGATGCCATGGGCGACGGT GGCCGGCTGACGCTGGGTACGCGCAACGTGGTGGTCACCGAGCCGGCGCTGCGGGCTGAAGATCCGGCGCCGGGCGAGTA CGTGGTGCTCTCGGTCACCGACACCGGTACCGGCATGAGCGAGGAAGTGCTGAGCAAGGCGTTCGAACCTTTCTTCACCA CCAAGGAAGTCGGCAAGGGCTCCGGCCTCGGCCTGGCGCAGGTGTTCGGCTTCGCCAAGCAGTCCGGTGGCGGCGCGCGC ATCGAAAGCCGTGTGGGGGTCGGCACCACCGTGAAGGTGTTCCTGCCACGCACCGCGGCGCCGGAGCAGCCGGAACAGGC CACGGCGCTGAGTGCGGGCAGCCACGACGAGAACAGCCAACACCGCATCCTGCTGGTGGACGATGACCACAGCGTGCGCG AGGTGACGGCGCAGATGCTGGAAAACCTCGGCTTCGCCGTCACCGAGGCGGAAAGCGGCGACCATGCGCTGCAGCTGCTC CGCGACGGAGCGGCGGTGGACCTGCTGCTGGCGGATTTCGCCATGCCGGGGATGAACGGCGGTGAACTGGCCCGCGCGGT GCGCGTTCGCCGCCCGCAGCTGCCGGTGGTTTTCGTCACCGGCTATGCCGAGCTCTGCGAGCTTGGCCTGGACGGCTATT CGATCATCCAGAAGCCGTTTCGCGAGGAACAGCTGGCCAACAAGATCCACCTCGCGCTGCGCGAAGGCAGCCTGGCCGAT GGCTGA
Upstream 100 bases:
>100_bases CAAGCGTGCGCGCAACAAAGAAGAAAAGAGCTCATAACGAAACGGTCCGCCTTGCCTGGCGGACCGTTTCGACGATCCCT GCTCCCTCGACAGGACGGAT
Downstream 100 bases:
>100_bases ATTGCGCATGCGCCTGCGGCAGGCTACGGCGCCGCTGCACGATCGGGTCGACAGCGCCTTCTCGGGCTTCGATCTGCAGG ACCCGGACGATTACCGCCGC
Product: sensory box histidine kinase/response regulator
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 801; Mature: 800
Protein sequence:
>801_residues MPASKNISVLFIEDSRHDAELAQLALERSGYTLQTELVYNHAGVVEALQRRRFDLILADFILPGFSGSQALQEARRLAPQ TPFIFLSGVFGEEHAVNMMRSGAVDYVLKQNLGFLPKAVERALGEVNERRRRLQAEQALREVEVRARLAIDAARLGMWDY EPQSGTLIWDERCRSMLGLDTEAPVSMGLFEQLLHPEDRERIHDEVIRAISGEDAGEFCTCYRVVFGDGSIRWMETRGQA FFESGQCTRFVGVVMDITEQQLTTQSLRQINETLGERVEERTRERDRTWELSRDLLAVTELDMLPVALNPFWENALGWSY SELMQRPLTQLVHPDDLQATLEENANVGRGKVTNRFVNRMRHRDGSYRWLSWSAVADGGRIYSAARDITSEIAAVDKLAE ANRELRAQIQERERVEATLQQMQRLEAVGQLTAGVAHDFNNLLTVILTSASFLKNDLEQGAPLERSLRRLQYIRESGERG ATLTGQLLAFARRQQLAPTAIDLNDTLVSLLSLLKSTLGGSVSIETDTQADIWHALVDPTQIEMIILNLAINARDAMGDG GRLTLGTRNVVVTEPALRAEDPAPGEYVVLSVTDTGTGMSEEVLSKAFEPFFTTKEVGKGSGLGLAQVFGFAKQSGGGAR IESRVGVGTTVKVFLPRTAAPEQPEQATALSAGSHDENSQHRILLVDDDHSVREVTAQMLENLGFAVTEAESGDHALQLL RDGAAVDLLLADFAMPGMNGGELARAVRVRRPQLPVVFVTGYAELCELGLDGYSIIQKPFREEQLANKIHLALREGSLAD G
Sequences:
>Translated_801_residues MPASKNISVLFIEDSRHDAELAQLALERSGYTLQTELVYNHAGVVEALQRRRFDLILADFILPGFSGSQALQEARRLAPQ TPFIFLSGVFGEEHAVNMMRSGAVDYVLKQNLGFLPKAVERALGEVNERRRRLQAEQALREVEVRARLAIDAARLGMWDY EPQSGTLIWDERCRSMLGLDTEAPVSMGLFEQLLHPEDRERIHDEVIRAISGEDAGEFCTCYRVVFGDGSIRWMETRGQA FFESGQCTRFVGVVMDITEQQLTTQSLRQINETLGERVEERTRERDRTWELSRDLLAVTELDMLPVALNPFWENALGWSY SELMQRPLTQLVHPDDLQATLEENANVGRGKVTNRFVNRMRHRDGSYRWLSWSAVADGGRIYSAARDITSEIAAVDKLAE ANRELRAQIQERERVEATLQQMQRLEAVGQLTAGVAHDFNNLLTVILTSASFLKNDLEQGAPLERSLRRLQYIRESGERG ATLTGQLLAFARRQQLAPTAIDLNDTLVSLLSLLKSTLGGSVSIETDTQADIWHALVDPTQIEMIILNLAINARDAMGDG GRLTLGTRNVVVTEPALRAEDPAPGEYVVLSVTDTGTGMSEEVLSKAFEPFFTTKEVGKGSGLGLAQVFGFAKQSGGGAR IESRVGVGTTVKVFLPRTAAPEQPEQATALSAGSHDENSQHRILLVDDDHSVREVTAQMLENLGFAVTEAESGDHALQLL RDGAAVDLLLADFAMPGMNGGELARAVRVRRPQLPVVFVTGYAELCELGLDGYSIIQKPFREEQLANKIHLALREGSLAD G >Mature_800_residues PASKNISVLFIEDSRHDAELAQLALERSGYTLQTELVYNHAGVVEALQRRRFDLILADFILPGFSGSQALQEARRLAPQT PFIFLSGVFGEEHAVNMMRSGAVDYVLKQNLGFLPKAVERALGEVNERRRRLQAEQALREVEVRARLAIDAARLGMWDYE PQSGTLIWDERCRSMLGLDTEAPVSMGLFEQLLHPEDRERIHDEVIRAISGEDAGEFCTCYRVVFGDGSIRWMETRGQAF FESGQCTRFVGVVMDITEQQLTTQSLRQINETLGERVEERTRERDRTWELSRDLLAVTELDMLPVALNPFWENALGWSYS ELMQRPLTQLVHPDDLQATLEENANVGRGKVTNRFVNRMRHRDGSYRWLSWSAVADGGRIYSAARDITSEIAAVDKLAEA NRELRAQIQERERVEATLQQMQRLEAVGQLTAGVAHDFNNLLTVILTSASFLKNDLEQGAPLERSLRRLQYIRESGERGA TLTGQLLAFARRQQLAPTAIDLNDTLVSLLSLLKSTLGGSVSIETDTQADIWHALVDPTQIEMIILNLAINARDAMGDGG RLTLGTRNVVVTEPALRAEDPAPGEYVVLSVTDTGTGMSEEVLSKAFEPFFTTKEVGKGSGLGLAQVFGFAKQSGGGARI ESRVGVGTTVKVFLPRTAAPEQPEQATALSAGSHDENSQHRILLVDDDHSVREVTAQMLENLGFAVTEAESGDHALQLLR DGAAVDLLLADFAMPGMNGGELARAVRVRRPQLPVVFVTGYAELCELGLDGYSIIQKPFREEQLANKIHLALREGSLADG
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=265, Percent_Identity=29.811320754717, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI87081816, Length=406, Percent_Identity=24.8768472906404, Blast_Score=77, Evalue=5e-15, Organism=Escherichia coli, GI1788549, Length=246, Percent_Identity=26.8292682926829, Blast_Score=76, Evalue=9e-15, Organism=Escherichia coli, GI1788713, Length=373, Percent_Identity=24.9329758713137, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI48994928, Length=309, Percent_Identity=26.537216828479, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788381, Length=213, Percent_Identity=27.2300469483568, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 88705; Mature: 88573
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASKNISVLFIEDSRHDAELAQLALERSGYTLQTELVYNHAGVVEALQRRRFDLILADF CCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH ILPGFSGSQALQEARRLAPQTPFIFLSGVFGEEHAVNMMRSGAVDYVLKQNLGFLPKAVE HCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHH RALGEVNERRRRLQAEQALREVEVRARLAIDAARLGMWDYEPQSGTLIWDERCRSMLGLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHCCC TEAPVSMGLFEQLLHPEDRERIHDEVIRAISGEDAGEFCTCYRVVFGDGSIRWMETRGQA CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCCEEEEECCCCH FFESGQCTRFVGVVMDITEQQLTTQSLRQINETLGERVEERTRERDRTWELSRDLLAVTE HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDMLPVALNPFWENALGWSYSELMQRPLTQLVHPDDLQATLEENANVGRGKVTNRFVNRM HHHCCEECCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHH RHRDGSYRWLSWSAVADGGRIYSAARDITSEIAAVDKLAEANRELRAQIQERERVEATLQ HCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMQRLEAVGQLTAGVAHDFNNLLTVILTSASFLKNDLEQGAPLERSLRRLQYIRESGERG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC ATLTGQLLAFARRQQLAPTAIDLNDTLVSLLSLLKSTLGGSVSIETDTQADIWHALVDPT CCHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCC QIEMIILNLAINARDAMGDGGRLTLGTRNVVVTEPALRAEDPAPGEYVVLSVTDTGTGMS CEEEEEEEEEEECCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCH EEVLSKAFEPFFTTKEVGKGSGLGLAQVFGFAKQSGGGARIESRVGVGTTVKVFLPRTAA HHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEECCCC PEQPEQATALSAGSHDENSQHRILLVDDDHSVREVTAQMLENLGFAVTEAESGDHALQLL CCCCCHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHH RDGAAVDLLLADFAMPGMNGGELARAVRVRRPQLPVVFVTGYAELCELGLDGYSIIQKPF HCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCHHHHHHHH REEQLANKIHLALREGSLADG HHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure PASKNISVLFIEDSRHDAELAQLALERSGYTLQTELVYNHAGVVEALQRRRFDLILADF CCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH ILPGFSGSQALQEARRLAPQTPFIFLSGVFGEEHAVNMMRSGAVDYVLKQNLGFLPKAVE HCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHH RALGEVNERRRRLQAEQALREVEVRARLAIDAARLGMWDYEPQSGTLIWDERCRSMLGLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHCCC TEAPVSMGLFEQLLHPEDRERIHDEVIRAISGEDAGEFCTCYRVVFGDGSIRWMETRGQA CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCCEEEEECCCCH FFESGQCTRFVGVVMDITEQQLTTQSLRQINETLGERVEERTRERDRTWELSRDLLAVTE HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDMLPVALNPFWENALGWSYSELMQRPLTQLVHPDDLQATLEENANVGRGKVTNRFVNRM HHHCCEECCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHH RHRDGSYRWLSWSAVADGGRIYSAARDITSEIAAVDKLAEANRELRAQIQERERVEATLQ HCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMQRLEAVGQLTAGVAHDFNNLLTVILTSASFLKNDLEQGAPLERSLRRLQYIRESGERG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC ATLTGQLLAFARRQQLAPTAIDLNDTLVSLLSLLKSTLGGSVSIETDTQADIWHALVDPT CCHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCC QIEMIILNLAINARDAMGDGGRLTLGTRNVVVTEPALRAEDPAPGEYVVLSVTDTGTGMS CEEEEEEEEEEECCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCH EEVLSKAFEPFFTTKEVGKGSGLGLAQVFGFAKQSGGGARIESRVGVGTTVKVFLPRTAA HHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEECCCC PEQPEQATALSAGSHDENSQHRILLVDDDHSVREVTAQMLENLGFAVTEAESGDHALQLL CCCCCHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHH RDGAAVDLLLADFAMPGMNGGELARAVRVRRPQLPVVFVTGYAELCELGLDGYSIIQKPF HCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCHHHHHHHH REEQLANKIHLALREGSLADG HHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA