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The map label for this gene is 146284470

Identifier: 146284470

GI number: 146284470

Start: 4513182

End: 4514495

Strand: Direct

Name: 146284470

Synonym: PST_4159

Alternate gene names: NA

Gene position: 4513182-4514495 (Clockwise)

Preceding gene: 146284468

Following gene: 146284471

Centisome position: 98.81

GC content: 65.45

Gene sequence:

>1314_bases
GTGCAATGCCGGTACTGCCGGATCGGTCGCCGGAGGCGCCCTGATCATCCTTTTGTTTGTTTGCCGGCCGGCTCCAATTC
GGGAAGCGCGGAAACCACAGCGTTCACCCGATCAGCCTCCTTTGTCCGGACCTGTAAGCAAATGTTCCCGAGGCAACCGA
CGGGCGGTAGCGGTTGCCATCGATCAGTTGGGCTGGCGCGCGGTCGACGAGCTGTTTACTGTATATATAAACAGCATTTG
GCCACGACCATGACCCTGCCCATTTCCACACCACGCGGCCGCGGTACGGCGGTGAACCCGGACAACCGCTTCGCGCCCAC
GCGCAGCGAGGCCTACGACGATGGCTGGGAACAGGACGTCCCGCCGACCCGCGCCACCGAGGTGCGCCGCGAGATCGCCA
AGTCGGTCCTGACGCGCAACCAGTCGCCGGACGTCGGTTTCGATCGCTCGGTCAACCCTTACCGCGGTTGCGAACATGGC
TGCATCTACTGTTTTGCGCGGCCATCGCACGCGTACTGGGATCTTTCGCCGGGCATCGATTTCGAGACCCGGCTGATCGC
CAAGACCAACCTCGCCGAACGGCTGGAGGCCGAGCTGAGCAAGCCGGGCTACGTGCCGCAGCCCATCGCCCTGGGGGTGA
ACACCGATGCCTATCAGCCGCTGGAGCGCGAGCAGCGGCTGACGCGCCAGGCATTGGAGATCCTGCTGCGCTTCAGGCAT
CCGGTGCACATCATCACCAAGGGTTCGCTGGTGCTGCGCGACCTGGACCTGCTGGTGCCGCTGGCCGAGCAGCGGCTGGT
CAGCGTGTCGGTCAGTCTCACGACCCTGGACGATGAACTCAAACGCATCATGGAGCCGCGCGCAGCCTCGCCTTCGGCGC
GCCTGCGGGTATTGCGCACACTGCACGAGGCCGGCGTGCCGGTCAGCGTGATGTGCGCGCCGATGATCCCGATGATCAAC
GACATGGAGCTGGAGCGCCTGCTGGAAGCCGCCCGCGAAGCCGGTGCGCGTTCGGCCGGCTACGTGCTGCTGCGCCTGCC
TCATGAGGTGGCCGGGCTGTTCGAGGGCTGGCTCGAGGAACACTTCCCACAGCGCGCCGCCCATGTCATGAGCCTGGTGC
GCCAGTCGCGCGGCGGCAAGGATTACGACAGCCGTTTCGGCAGCCGCATGCGCGGCGAAGGCCAGTTCGCCCAACTGCTC
GCCCAGCGTTTCCAGCTGGCCTGCAAGCGGCTGGGCTTCAATCGGCGGGATCAGAATTACGGCCTGGATTGCAGCCGTTT
CGTCGTGCCGGGACGGCAGATGCCATTGCTCTGA

Upstream 100 bases:

>100_bases
GCAGGAAATCGAAGTTGTTTTCCCGGGTGTGGAAGGAACCGGTGGGATGCATGGTCTGCTCCTGACTGTCGGCAGTGGCT
GGAAGCTGGAGTGCACGGGA

Downstream 100 bases:

>100_bases
TTTCGCCGCGCCAGGATGCCAGTGCCATCATTGCGCTAGCGGGGCAATCGTCGCAAAGGCTCGTCCTAGAGCGGCTCGTT
CAGTTTCAGTTAAGTCTCGC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MQCRYCRIGRRRRPDHPFVCLPAGSNSGSAETTAFTRSASFVRTCKQMFPRQPTGGSGCHRSVGLARGRRAVYCIYKQHL
ATTMTLPISTPRGRGTAVNPDNRFAPTRSEAYDDGWEQDVPPTRATEVRREIAKSVLTRNQSPDVGFDRSVNPYRGCEHG
CIYCFARPSHAYWDLSPGIDFETRLIAKTNLAERLEAELSKPGYVPQPIALGVNTDAYQPLEREQRLTRQALEILLRFRH
PVHIITKGSLVLRDLDLLVPLAEQRLVSVSVSLTTLDDELKRIMEPRAASPSARLRVLRTLHEAGVPVSVMCAPMIPMIN
DMELERLLEAAREAGARSAGYVLLRLPHEVAGLFEGWLEEHFPQRAAHVMSLVRQSRGGKDYDSRFGSRMRGEGQFAQLL
AQRFQLACKRLGFNRRDQNYGLDCSRFVVPGRQMPLL

Sequences:

>Translated_437_residues
MQCRYCRIGRRRRPDHPFVCLPAGSNSGSAETTAFTRSASFVRTCKQMFPRQPTGGSGCHRSVGLARGRRAVYCIYKQHL
ATTMTLPISTPRGRGTAVNPDNRFAPTRSEAYDDGWEQDVPPTRATEVRREIAKSVLTRNQSPDVGFDRSVNPYRGCEHG
CIYCFARPSHAYWDLSPGIDFETRLIAKTNLAERLEAELSKPGYVPQPIALGVNTDAYQPLEREQRLTRQALEILLRFRH
PVHIITKGSLVLRDLDLLVPLAEQRLVSVSVSLTTLDDELKRIMEPRAASPSARLRVLRTLHEAGVPVSVMCAPMIPMIN
DMELERLLEAAREAGARSAGYVLLRLPHEVAGLFEGWLEEHFPQRAAHVMSLVRQSRGGKDYDSRFGSRMRGEGQFAQLL
AQRFQLACKRLGFNRRDQNYGLDCSRFVVPGRQMPLL
>Mature_437_residues
MQCRYCRIGRRRRPDHPFVCLPAGSNSGSAETTAFTRSASFVRTCKQMFPRQPTGGSGCHRSVGLARGRRAVYCIYKQHL
ATTMTLPISTPRGRGTAVNPDNRFAPTRSEAYDDGWEQDVPPTRATEVRREIAKSVLTRNQSPDVGFDRSVNPYRGCEHG
CIYCFARPSHAYWDLSPGIDFETRLIAKTNLAERLEAELSKPGYVPQPIALGVNTDAYQPLEREQRLTRQALEILLRFRH
PVHIITKGSLVLRDLDLLVPLAEQRLVSVSVSLTTLDDELKRIMEPRAASPSARLRVLRTLHEAGVPVSVMCAPMIPMIN
DMELERLLEAAREAGARSAGYVLLRLPHEVAGLFEGWLEEHFPQRAAHVMSLVRQSRGGKDYDSRFGSRMRGEGQFAQLL
AQRFQLACKRLGFNRRDQNYGLDCSRFVVPGRQMPLL

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 49213; Mature: 49213

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCRYCRIGRRRRPDHPFVCLPAGSNSGSAETTAFTRSASFVRTCKQMFPRQPTGGSGCH
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
RSVGLARGRRAVYCIYKQHLATTMTLPISTPRGRGTAVNPDNRFAPTRSEAYDDGWEQDV
HHHHHHCCCCEEEEEEHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
PPTRATEVRREIAKSVLTRNQSPDVGFDRSVNPYRGCEHGCIYCFARPSHAYWDLSPGID
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCC
FETRLIAKTNLAERLEAELSKPGYVPQPIALGVNTDAYQPLEREQRLTRQALEILLRFRH
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PVHIITKGSLVLRDLDLLVPLAEQRLVSVSVSLTTLDDELKRIMEPRAASPSARLRVLRT
CEEEEECCCCHHHHHHHHHHHHHHHEEEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHH
LHEAGVPVSVMCAPMIPMINDMELERLLEAAREAGARSAGYVLLRLPHEVAGLFEGWLEE
HHHCCCCCEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHH
HFPQRAAHVMSLVRQSRGGKDYDSRFGSRMRGEGQFAQLLAQRFQLACKRLGFNRRDQNY
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
GLDCSRFVVPGRQMPLL
CCCCHHEECCCCCCCCC
>Mature Secondary Structure
MQCRYCRIGRRRRPDHPFVCLPAGSNSGSAETTAFTRSASFVRTCKQMFPRQPTGGSGCH
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
RSVGLARGRRAVYCIYKQHLATTMTLPISTPRGRGTAVNPDNRFAPTRSEAYDDGWEQDV
HHHHHHCCCCEEEEEEHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
PPTRATEVRREIAKSVLTRNQSPDVGFDRSVNPYRGCEHGCIYCFARPSHAYWDLSPGID
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCC
FETRLIAKTNLAERLEAELSKPGYVPQPIALGVNTDAYQPLEREQRLTRQALEILLRFRH
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PVHIITKGSLVLRDLDLLVPLAEQRLVSVSVSLTTLDDELKRIMEPRAASPSARLRVLRT
CEEEEECCCCHHHHHHHHHHHHHHHEEEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHH
LHEAGVPVSVMCAPMIPMINDMELERLLEAAREAGARSAGYVLLRLPHEVAGLFEGWLEE
HHHCCCCCEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHH
HFPQRAAHVMSLVRQSRGGKDYDSRFGSRMRGEGQFAQLLAQRFQLACKRLGFNRRDQNY
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
GLDCSRFVVPGRQMPLL
CCCCHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]