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The map label for this gene is yvbT [H]

Identifier: 146284444

GI number: 146284444

Start: 4486094

End: 4486936

Strand: Direct

Name: yvbT [H]

Synonym: PST_4133

Alternate gene names: 146284444

Gene position: 4486094-4486936 (Clockwise)

Preceding gene: 146284443

Following gene: 146284445

Centisome position: 98.22

GC content: 68.45

Gene sequence:

>843_bases
ATGGACGGCATCGCCAGCGCCGCCACCGCCGTGCTGATCGGCTACCTGGCCGCCAACACCACGCGCATCCGCCTCGGTGC
CGGCGGGGTGATGCTGCCGAATCACGCGCCGCTGGTGATCGCCGAGCAGTTCGGCACGCTGGAAGCGCTCTACCCGGGCC
GCATCGACCTCGGGCTCGGTCGCGCCCCCGGCGCCGATCAGTTCACCGCCCATGCATTGCGCCGCGACCGCATGGGCAGC
GCCGACGACTTCCCGCAGGACGTCGAGGAGCTGGAGCTGCTGCTCGGTCCGCGCCAGCCCAATCAGCGCGTCATCGCCAT
GCCGGGAGTGAACAGCAACATACCGATCTGGCTGCTCGGCTCCAGCCTGTTCAGTGCCCAGCTGGCCGCGGCCAAGGGAC
TGCCCTACGCCTTCGCCTCGCACTTCGCGCCGCGCTACATGCATCAGGCCATCAAGCTCTATCGCGACAACTTCAAGCCT
TCGGCGGTGCTCGACAAGCCCTACGTGATGCTCGGCGTGCCGCTGATTGCCGCCGACAGCGACGAGCAGGCCGAGTATCT
GGTGACCAGCGTCTACCAGCGCATTCTCTCGCTGATCCGCGGCCAGAGCCTGGTGCTGCGCCCGCCGGTGCAGAGCATGC
AGGGCCTGTGGCTGCCGCATGAGCAGCAGGCCGTGGGCGACTTCCTCGGCCTGGCGCTGATCGGCGGCCCGGAGAAGGTT
CGCGCGCGTCTCGACGTGCTGCTGGAGCAGACCCAGGCCGACGAGCTGATCTTTACCTGCGACCTCTACGAAACCGCGGA
CCGCCATCGCGCCTTCGAGATCGTCGCCGAGCTGCGCCAGTAG

Upstream 100 bases:

>100_bases
CGACGGCACGCCGGCCCAGGCGCTGCACAACGCCCTGGCCCTGGCGCGTCACGTCGAGGGGCTCGGCTTCCAGCGCTTCT
GGGTGGCCGAGCACCACAAC

Downstream 100 bases:

>100_bases
CACCCCGACCGCTGCCCTGACCGGCGGCGGCATCACGCGGCACTGCCGGCGAACCCTGCCGCCGGCCACCGTTCCGATGG
CATACACCCCCTGGGCGCAA

Product: luciferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MDGIASAATAVLIGYLAANTTRIRLGAGGVMLPNHAPLVIAEQFGTLEALYPGRIDLGLGRAPGADQFTAHALRRDRMGS
ADDFPQDVEELELLLGPRQPNQRVIAMPGVNSNIPIWLLGSSLFSAQLAAAKGLPYAFASHFAPRYMHQAIKLYRDNFKP
SAVLDKPYVMLGVPLIAADSDEQAEYLVTSVYQRILSLIRGQSLVLRPPVQSMQGLWLPHEQQAVGDFLGLALIGGPEKV
RARLDVLLEQTQADELIFTCDLYETADRHRAFEIVAELRQ

Sequences:

>Translated_280_residues
MDGIASAATAVLIGYLAANTTRIRLGAGGVMLPNHAPLVIAEQFGTLEALYPGRIDLGLGRAPGADQFTAHALRRDRMGS
ADDFPQDVEELELLLGPRQPNQRVIAMPGVNSNIPIWLLGSSLFSAQLAAAKGLPYAFASHFAPRYMHQAIKLYRDNFKP
SAVLDKPYVMLGVPLIAADSDEQAEYLVTSVYQRILSLIRGQSLVLRPPVQSMQGLWLPHEQQAVGDFLGLALIGGPEKV
RARLDVLLEQTQADELIFTCDLYETADRHRAFEIVAELRQ
>Mature_280_residues
MDGIASAATAVLIGYLAANTTRIRLGAGGVMLPNHAPLVIAEQFGTLEALYPGRIDLGLGRAPGADQFTAHALRRDRMGS
ADDFPQDVEELELLLGPRQPNQRVIAMPGVNSNIPIWLLGSSLFSAQLAAAKGLPYAFASHFAPRYMHQAIKLYRDNFKP
SAVLDKPYVMLGVPLIAADSDEQAEYLVTSVYQRILSLIRGQSLVLRPPVQSMQGLWLPHEQQAVGDFLGLALIGGPEKV
RARLDVLLEQTQADELIFTCDLYETADRHRAFEIVAELRQ

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=280, Percent_Identity=56.0714285714286, Blast_Score=313, Evalue=8e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 30625; Mature: 30625

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGIASAATAVLIGYLAANTTRIRLGAGGVMLPNHAPLVIAEQFGTLEALYPGRIDLGLG
CCCHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCEEEEECCCCEEEECCCCEEECCC
RAPGADQFTAHALRRDRMGSADDFPQDVEELELLLGPRQPNQRVIAMPGVNSNIPIWLLG
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEC
SSLFSAQLAAAKGLPYAFASHFAPRYMHQAIKLYRDNFKPSAVLDKPYVMLGVPLIAADS
CHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECEEEECCC
DEQAEYLVTSVYQRILSLIRGQSLVLRPPVQSMQGLWLPHEQQAVGDFLGLALIGGPEKV
CCHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHH
RARLDVLLEQTQADELIFTCDLYETADRHRAFEIVAELRQ
HHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDGIASAATAVLIGYLAANTTRIRLGAGGVMLPNHAPLVIAEQFGTLEALYPGRIDLGLG
CCCHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCEEEEECCCCEEEECCCCEEECCC
RAPGADQFTAHALRRDRMGSADDFPQDVEELELLLGPRQPNQRVIAMPGVNSNIPIWLLG
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEC
SSLFSAQLAAAKGLPYAFASHFAPRYMHQAIKLYRDNFKPSAVLDKPYVMLGVPLIAADS
CHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECEEEECCC
DEQAEYLVTSVYQRILSLIRGQSLVLRPPVQSMQGLWLPHEQQAVGDFLGLALIGGPEKV
CCHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHH
RARLDVLLEQTQADELIFTCDLYETADRHRAFEIVAELRQ
HHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]