| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is engB [H]
Identifier: 146284373
GI number: 146284373
Start: 4415653
End: 4416336
Strand: Direct
Name: engB [H]
Synonym: PST_4061
Alternate gene names: 146284373
Gene position: 4415653-4416336 (Clockwise)
Preceding gene: 146284367
Following gene: 146284384
Centisome position: 96.68
GC content: 62.72
Gene sequence:
>684_bases TTGCCGCACCCGCGTGCACTCACCGGAACGACCATGCTACCGAAAAACCCGATTCTCGGCCTTTGCCAACAGGCCTCCTT CATGATCAGCGCCGCCAAGGTCGATCAGTGCCCGGCCGACGAGGGTCTGGAAGTGGCCTTCGCCGGTCGATCCAATGCGG GCAAGTCCAGTGCGCTGAACACCCTCACCCACGCCAACCTGGCGCGCACCTCGAAGACACCGGGACGCACCCAGTTACTC AATTTCTTCCGCCTCGATGACGAGCGCCGCCTGGTCGACCTGCCCGGTTATGGTTACGCCAAGGTGCCGATCCCGCTCAA GCAGCATTGGCAGCGCCATCTGGAAGCCTACCTGGGCAGCCGCGAGAGTCTGGTCGGGGTGTTCCTGATGATGGATATCC GCCATCCGCTGACGGAGTTCGACCGCATGATGCTGGACTGGGCCAATGCCAGTGACATGCCGTTGCACATCCTGCTGACC AAATCCGACAAGCTGGCCTTCGGCGCGGCGAAGAACGCGCTGCTGGCGATCCAACGCGATATCCGCAAGGGCTGGGGTGC CGATGTCAGTGTGCAGCTGTTCTCCGCTCCCAAGCGGCAGGGTGTGGAAGAGGCGCAGCTGGTACTGGCCAGCTGGCTCG GTTTGCTGGACGACTCCGAGCAAGACCAGGCACCTGAAGCGTAA
Upstream 100 bases:
>100_bases CCGCAACAGGCTGGACACCACGCACGGCCCGATATCAGGCCAAAGCGCACATAAAAACTGCGGCATTATATACTTCCGTT TCTGAAACGGAAACGAACCA
Downstream 100 bases:
>100_bases GACCGCTCAGCACCGCTGATCCACCACGCCGTGCCAGCACGCCTGTGGTGGATGCGAACGCGACATCTATCCGCGATGCA CCGGCGGCATGGCCGGGAAT
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MPHPRALTGTTMLPKNPILGLCQQASFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLTHANLARTSKTPGRTQLL NFFRLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLVGVFLMMDIRHPLTEFDRMMLDWANASDMPLHILLT KSDKLAFGAAKNALLAIQRDIRKGWGADVSVQLFSAPKRQGVEEAQLVLASWLGLLDDSEQDQAPEA
Sequences:
>Translated_227_residues MPHPRALTGTTMLPKNPILGLCQQASFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLTHANLARTSKTPGRTQLL NFFRLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLVGVFLMMDIRHPLTEFDRMMLDWANASDMPLHILLT KSDKLAFGAAKNALLAIQRDIRKGWGADVSVQLFSAPKRQGVEEAQLVLASWLGLLDDSEQDQAPEA >Mature_226_residues PHPRALTGTTMLPKNPILGLCQQASFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLTHANLARTSKTPGRTQLLN FFRLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLVGVFLMMDIRHPLTEFDRMMLDWANASDMPLHILLTK SDKLAFGAAKNALLAIQRDIRKGWGADVSVQLFSAPKRQGVEEAQLVLASWLGLLDDSEQDQAPEA
Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI56549685, Length=195, Percent_Identity=32.8205128205128, Blast_Score=91, Evalue=1e-18, Organism=Escherichia coli, GI145693205, Length=205, Percent_Identity=52.6829268292683, Blast_Score=210, Evalue=8e-56, Organism=Saccharomyces cerevisiae, GI6320543, Length=221, Percent_Identity=26.6968325791855, Blast_Score=79, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019987 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 25060; Mature: 24929
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPRALTGTTMLPKNPILGLCQQASFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHH TLTHANLARTSKTPGRTQLLNFFRLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGS HHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHCC RESLVGVFLMMDIRHPLTEFDRMMLDWANASDMPLHILLTKSDKLAFGAAKNALLAIQRD HHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHH IRKGWGADVSVQLFSAPKRQGVEEAQLVLASWLGLLDDSEQDQAPEA HHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PHPRALTGTTMLPKNPILGLCQQASFMISAAKVDQCPADEGLEVAFAGRSNAGKSSALN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHH TLTHANLARTSKTPGRTQLLNFFRLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGS HHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHCC RESLVGVFLMMDIRHPLTEFDRMMLDWANASDMPLHILLTKSDKLAFGAAKNALLAIQRD HHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHH IRKGWGADVSVQLFSAPKRQGVEEAQLVLASWLGLLDDSEQDQAPEA HHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA