| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146284332
Identifier: 146284332
GI number: 146284332
Start: 4359877
End: 4361250
Strand: Direct
Name: 146284332
Synonym: PST_4020
Alternate gene names: NA
Gene position: 4359877-4361250 (Clockwise)
Preceding gene: 146284331
Following gene: 146284334
Centisome position: 95.46
GC content: 70.96
Gene sequence:
>1374_bases ATGACTGAAGCGCTGAAACTGGCCGTGGTCGGCCATACCAATGTCGGCAAGACCTCCCTGCTGCGCACCCTGACTCGCGA CATCGGCTTCGGTGAGGTCTCGCACCGGCCGAGCACCACCCGCCACGTCGAGGGTGCGCGGCTGTCGGTGGACGGCGAGC CGCTGCTGGAGCTTTACGACACCCCCGGCCTGGAAGATGCAATCGCCCTGCTCGACTACCTCGAACGGCTAGAGCGCCCC GGTGAGCGCCTCGACGGCCCGGCACGCACCGCGCGCTTTCTCGACGGCAGCGAGGCACGCCAGCGCTTCGAGCAGGAAGC CAAGGTGCTGCGTCAGCTGCTGGCCAGCGACGCCGGGCTCTACGTGATCGACGCCCGTGAGCCGGTGCTGGCCAAGTACA AGGATGAGCTGGCGGTGCTCGCCGGCTGCGGCAAGCCGCTGTTGCCGGTGCTCAACTTCGTCGCCCAGCCGGGGCACCGC GACGAGGAATGGCGTCAGGCCCTGGCCCGCCTCGGCCTGCATGCACTGGTGCGCTTCGACAGCGTAGCGCCACCCGTGGA CGGTGAGCGCCGGCTGTACGAAAGCCTGGCGCTGCTGCTGGAACAGGCGCGACCCAAGCTGCAGCGACTGATCGAGGACC ACGAGGCCCAGGCTGCTGCACGCCTGGCCAGCGGCCAGCGACTGATCGCCGAACTGCTGGTGGATGTCGCCGCCTGCCGA CGCAGCGTGGCCGCACAGCCGGAACTCGAGCGCGGCGCCATTCGTGAACTGCACGATGCCGTGCGCCGCCGCGAACAGCG CTGCGTCGAGGCGCTGCTGCGCCTGTATGCCTTTCGCCAGGACGATGCAGCGGCCAGTGATCTGCCGCTGCTCGACGGGC GCTGGGGCGACGACCTGTTCAACCCCGAGACCCTCAAGCAGCTGGGCGTGAAGATCGGCGGCGGCATGGCCGCAGGTGCC GCGGCCGGTGCCGGCGTCGACCTGATGGTCGGCGGCATCACCCTCGGCGCCGCGGCGCTGCTCGGCGCCATTGCCGGCGG CGGCGCGCAGACCGCGCGGCACTATGGCAATCGCCTGCTCGGCAAGCTCAAGGGGCAGCGCGAGCTGAGCGTCGACGACG CCGTACTGCGCCTGCTCGCCCTGCGCCAGCGTCAACTGCTGGCCGTGCTCGCGACTCGGGGGCACGCCGCCACCGAGGCG ATCCGCCTGGCCACGCCGCAGGATCAGGGCTGGCGCGAGGGCAAGCTGCCCGAAGCCCTGCAACGCTGTCGTGCGCATCC CGAGTGGTCCTCGCTCAACCCCGGCGCCCGCCTGCAGAACGGCGAGCGCCAGACGGCGCTGGACGAGCTGCAGGCCGAAC TGCGGCAGGGCTGA
Upstream 100 bases:
>100_bases GCGCTGGACAGCGCGCGCCTGGAAGACTGGCACCAGGCGCTGGATACCCTGGGGCTAGCGCATTCGAACTGCGCCCCGCT GCGCTGGCTGGAGACAGGCC
Downstream 100 bases:
>100_bases CCAGCCTGCCGCTTCACCGTGCCTGCACACTAGGCACGGACCGGCGCACCATCGCCGGCCCTGCTTGGCGCCGGCTGGCG GCCGATGCCCAGGGTGCACA
Product: GTPase SAR1
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MTEALKLAVVGHTNVGKTSLLRTLTRDIGFGEVSHRPSTTRHVEGARLSVDGEPLLELYDTPGLEDAIALLDYLERLERP GERLDGPARTARFLDGSEARQRFEQEAKVLRQLLASDAGLYVIDAREPVLAKYKDELAVLAGCGKPLLPVLNFVAQPGHR DEEWRQALARLGLHALVRFDSVAPPVDGERRLYESLALLLEQARPKLQRLIEDHEAQAAARLASGQRLIAELLVDVAACR RSVAAQPELERGAIRELHDAVRRREQRCVEALLRLYAFRQDDAAASDLPLLDGRWGDDLFNPETLKQLGVKIGGGMAAGA AAGAGVDLMVGGITLGAAALLGAIAGGGAQTARHYGNRLLGKLKGQRELSVDDAVLRLLALRQRQLLAVLATRGHAATEA IRLATPQDQGWREGKLPEALQRCRAHPEWSSLNPGARLQNGERQTALDELQAELRQG
Sequences:
>Translated_457_residues MTEALKLAVVGHTNVGKTSLLRTLTRDIGFGEVSHRPSTTRHVEGARLSVDGEPLLELYDTPGLEDAIALLDYLERLERP GERLDGPARTARFLDGSEARQRFEQEAKVLRQLLASDAGLYVIDAREPVLAKYKDELAVLAGCGKPLLPVLNFVAQPGHR DEEWRQALARLGLHALVRFDSVAPPVDGERRLYESLALLLEQARPKLQRLIEDHEAQAAARLASGQRLIAELLVDVAACR RSVAAQPELERGAIRELHDAVRRREQRCVEALLRLYAFRQDDAAASDLPLLDGRWGDDLFNPETLKQLGVKIGGGMAAGA AAGAGVDLMVGGITLGAAALLGAIAGGGAQTARHYGNRLLGKLKGQRELSVDDAVLRLLALRQRQLLAVLATRGHAATEA IRLATPQDQGWREGKLPEALQRCRAHPEWSSLNPGARLQNGERQTALDELQAELRQG >Mature_456_residues TEALKLAVVGHTNVGKTSLLRTLTRDIGFGEVSHRPSTTRHVEGARLSVDGEPLLELYDTPGLEDAIALLDYLERLERPG ERLDGPARTARFLDGSEARQRFEQEAKVLRQLLASDAGLYVIDAREPVLAKYKDELAVLAGCGKPLLPVLNFVAQPGHRD EEWRQALARLGLHALVRFDSVAPPVDGERRLYESLALLLEQARPKLQRLIEDHEAQAAARLASGQRLIAELLVDVAACRR SVAAQPELERGAIRELHDAVRRREQRCVEALLRLYAFRQDDAAASDLPLLDGRWGDDLFNPETLKQLGVKIGGGMAAGAA AGAGVDLMVGGITLGAAALLGAIAGGGAQTARHYGNRLLGKLKGQRELSVDDAVLRLLALRQRQLLAVLATRGHAATEAI RLATPQDQGWREGKLPEALQRCRAHPEWSSLNPGARLQNGERQTALDELQAELRQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49772; Mature: 49640
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEALKLAVVGHTNVGKTSLLRTLTRDIGFGEVSHRPSTTRHVEGARLSVDGEPLLELYD CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHC TPGLEDAIALLDYLERLERPGERLDGPARTARFLDGSEARQRFEQEAKVLRQLLASDAGL CCCHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCE YVIDAREPVLAKYKDELAVLAGCGKPLLPVLNFVAQPGHRDEEWRQALARLGLHALVRFD EEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH SVAPPVDGERRLYESLALLLEQARPKLQRLIEDHEAQAAARLASGQRLIAELLVDVAACR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSVAAQPELERGAIRELHDAVRRREQRCVEALLRLYAFRQDDAAASDLPLLDGRWGDDLF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC NPETLKQLGVKIGGGMAAGAAAGAGVDLMVGGITLGAAALLGAIAGGGAQTARHYGNRLL CHHHHHHHHHHHCCCHHHCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GKLKGQRELSVDDAVLRLLALRQRQLLAVLATRGHAATEAIRLATPQDQGWREGKLPEAL HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCCCHHHH QRCRAHPEWSSLNPGARLQNGERQTALDELQAELRQG HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TEALKLAVVGHTNVGKTSLLRTLTRDIGFGEVSHRPSTTRHVEGARLSVDGEPLLELYD CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHC TPGLEDAIALLDYLERLERPGERLDGPARTARFLDGSEARQRFEQEAKVLRQLLASDAGL CCCHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCE YVIDAREPVLAKYKDELAVLAGCGKPLLPVLNFVAQPGHRDEEWRQALARLGLHALVRFD EEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH SVAPPVDGERRLYESLALLLEQARPKLQRLIEDHEAQAAARLASGQRLIAELLVDVAACR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSVAAQPELERGAIRELHDAVRRREQRCVEALLRLYAFRQDDAAASDLPLLDGRWGDDLF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC NPETLKQLGVKIGGGMAAGAAAGAGVDLMVGGITLGAAALLGAIAGGGAQTARHYGNRLL CHHHHHHHHHHHCCCHHHCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GKLKGQRELSVDDAVLRLLALRQRQLLAVLATRGHAATEAIRLATPQDQGWREGKLPEAL HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCCCHHHH QRCRAHPEWSSLNPGARLQNGERQTALDELQAELRQG HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA