Click here to switch to the map view.

The map label for this gene is glpQ [H]

Identifier: 146284330

GI number: 146284330

Start: 4357336

End: 4358397

Strand: Direct

Name: glpQ [H]

Synonym: PST_4018

Alternate gene names: 146284330

Gene position: 4357336-4358397 (Clockwise)

Preceding gene: 146284327

Following gene: 146284331

Centisome position: 95.4

GC content: 67.33

Gene sequence:

>1062_bases
TTGCTACCGCTCTCCGGCTTCGCTGCGCCGGATGAACACGCCGCGAAACACCAGGCTGCGCGGGGCGAGCCGACCCCGCT
GGTGATCGCCCATCGCGGCGCCAGCGGCTATGTACCGGAGCACACCCTGGCCGCCTATGCCCTGGCCGTTTTCCAGGGCG
CCGACTACATCGAGCCGGACCTGGTGATGACCCGTGACGGCCATATCGTCGCCCGCCACGACAACGAGCTGGGCCTGACC
ACCGATGTCGCCCAACGCCCCGAGTTTGCCGATCGCAAGCGCACCCAGCAGGTCGACGGCGTCACCCTCACCGGCTGGTT
CAGCGAAGACTTCACCCTCGCCGAGCTGAAGACCCTGCGCGCCATCGAGCGCATCCCGGATATCCGCCCGGGCAATGCCC
GTATGGACGGCAGCCTGGAAATTCCGACCCTGCAGGAGATCATCGACCTGGTGAAAACGCTGCAGCTCAGCCAGGGCCGG
CGCATCGGTCTGTACCCGGAAACCAAGCATCCGACGCATTTCCAGCAGCTCGGCCTGGCCATGGAGAAGCCGCTGGTGCG
CACCCTCACCCGCAACGGCTACTTCGGGCGCCACGCGCCGGTGTATATCCAGTCGTTCGAGGTGGACAACCTCAAGACCC
TCAGCCGCCTGACCCAGCTGCGCCTGGTGCAGCTGTTCAGCTCCGGCCAGCCGTATGACCAGCAGGTGCGCGGGACCAAG
CTGACCTACGCGCAGATGGCCACCCCCGCCGGGCTCAAGGCCATCTCCCGCTACGCCGCCGGCGTCGGCCCGGAGAAGAG
CTACATCATTCCGCGTGACGGCAACGGCAATCTGGGCACGCCGACCGGCTTCGTCGCCGCCGCCCATGCGGTCGGGCTCA
AGGTCCATCCGTACACCTTCCGCGCAGAAAACGCCTTCCTCCCGGCCAACCTGCGCAGCAGCGACAAGCGCCACGAGCGC
GGCGACAGCGAAGCGGAGATCCGCGCCTTCCTCGATGCCGGCATCGATGGCCTGTTCATCGACCAGCCGGATATCGCCGT
GCGCCTGCGCAACGCCGACTGA

Upstream 100 bases:

>100_bases
ATGCAAGTGGCGCAGGCTGTGACATCCAAACCGAGGAGATGCCGAAATGGCCCGCAAGACCACCGCTTCCCTTCGCCGCT
GGCTCACCGCCTGCACCCTG

Downstream 100 bases:

>100_bases
CGACCACAGCGGGGAGCCGCAACGGCTCCCCGTTTCCCCGTTCCGCGCGGCAGCGGTTATCCTCAGGGCTCGACCCGCCA
GCGAGAAGCCGCGTGACCGT

Product: glycerophosphoryl diester phosphodiesterase, periplasmic

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MLPLSGFAAPDEHAAKHQAARGEPTPLVIAHRGASGYVPEHTLAAYALAVFQGADYIEPDLVMTRDGHIVARHDNELGLT
TDVAQRPEFADRKRTQQVDGVTLTGWFSEDFTLAELKTLRAIERIPDIRPGNARMDGSLEIPTLQEIIDLVKTLQLSQGR
RIGLYPETKHPTHFQQLGLAMEKPLVRTLTRNGYFGRHAPVYIQSFEVDNLKTLSRLTQLRLVQLFSSGQPYDQQVRGTK
LTYAQMATPAGLKAISRYAAGVGPEKSYIIPRDGNGNLGTPTGFVAAAHAVGLKVHPYTFRAENAFLPANLRSSDKRHER
GDSEAEIRAFLDAGIDGLFIDQPDIAVRLRNAD

Sequences:

>Translated_353_residues
MLPLSGFAAPDEHAAKHQAARGEPTPLVIAHRGASGYVPEHTLAAYALAVFQGADYIEPDLVMTRDGHIVARHDNELGLT
TDVAQRPEFADRKRTQQVDGVTLTGWFSEDFTLAELKTLRAIERIPDIRPGNARMDGSLEIPTLQEIIDLVKTLQLSQGR
RIGLYPETKHPTHFQQLGLAMEKPLVRTLTRNGYFGRHAPVYIQSFEVDNLKTLSRLTQLRLVQLFSSGQPYDQQVRGTK
LTYAQMATPAGLKAISRYAAGVGPEKSYIIPRDGNGNLGTPTGFVAAAHAVGLKVHPYTFRAENAFLPANLRSSDKRHER
GDSEAEIRAFLDAGIDGLFIDQPDIAVRLRNAD
>Mature_353_residues
MLPLSGFAAPDEHAAKHQAARGEPTPLVIAHRGASGYVPEHTLAAYALAVFQGADYIEPDLVMTRDGHIVARHDNELGLT
TDVAQRPEFADRKRTQQVDGVTLTGWFSEDFTLAELKTLRAIERIPDIRPGNARMDGSLEIPTLQEIIDLVKTLQLSQGR
RIGLYPETKHPTHFQQLGLAMEKPLVRTLTRNGYFGRHAPVYIQSFEVDNLKTLSRLTQLRLVQLFSSGQPYDQQVRGTK
LTYAQMATPAGLKAISRYAAGVGPEKSYIIPRDGNGNLGTPTGFVAAAHAVGLKVHPYTFRAENAFLPANLRSSDKRHER
GDSEAEIRAFLDAGIDGLFIDQPDIAVRLRNAD

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1788572, Length=348, Percent_Identity=36.7816091954023, Blast_Score=182, Evalue=3e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 38908; Mature: 38908

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLSGFAAPDEHAAKHQAARGEPTPLVIAHRGASGYVPEHTLAAYALAVFQGADYIEPD
CCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCC
LVMTRDGHIVARHDNELGLTTDVAQRPEFADRKRTQQVDGVTLTGWFSEDFTLAELKTLR
EEEECCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
AIERIPDIRPGNARMDGSLEIPTLQEIIDLVKTLQLSQGRRIGLYPETKHPTHFQQLGLA
HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHH
MEKPLVRTLTRNGYFGRHAPVYIQSFEVDNLKTLSRLTQLRLVQLFSSGQPYDQQVRGTK
HHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCE
LTYAQMATPAGLKAISRYAAGVGPEKSYIIPRDGNGNLGTPTGFVAAAHAVGLKVHPYTF
EEHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCEEECCEEE
RAENAFLPANLRSSDKRHERGDSEAEIRAFLDAGIDGLFIDQPDIAVRLRNAD
ECCCEEECCCCCCCCHHHHCCCCHHHHHHHHHCCCCEEEECCCCEEEEEECCC
>Mature Secondary Structure
MLPLSGFAAPDEHAAKHQAARGEPTPLVIAHRGASGYVPEHTLAAYALAVFQGADYIEPD
CCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCC
LVMTRDGHIVARHDNELGLTTDVAQRPEFADRKRTQQVDGVTLTGWFSEDFTLAELKTLR
EEEECCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
AIERIPDIRPGNARMDGSLEIPTLQEIIDLVKTLQLSQGRRIGLYPETKHPTHFQQLGLA
HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHH
MEKPLVRTLTRNGYFGRHAPVYIQSFEVDNLKTLSRLTQLRLVQLFSSGQPYDQQVRGTK
HHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCE
LTYAQMATPAGLKAISRYAAGVGPEKSYIIPRDGNGNLGTPTGFVAAAHAVGLKVHPYTF
EEHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCEEECCEEE
RAENAFLPANLRSSDKRHERGDSEAEIRAFLDAGIDGLFIDQPDIAVRLRNAD
ECCCEEECCCCCCCCHHHHCCCCHHHHHHHHHCCCCEEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1851953; 9205837; 9278503; 3329281; 8899705 [H]