| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is yeaX [C]
Identifier: 146284242
GI number: 146284242
Start: 4259825
End: 4261156
Strand: Direct
Name: yeaX [C]
Synonym: PST_3930
Alternate gene names: 146284242
Gene position: 4259825-4261156 (Clockwise)
Preceding gene: 146284239
Following gene: 146284243
Centisome position: 93.27
GC content: 66.97
Gene sequence:
>1332_bases ATGAGACAGATAAAACTCACCTACGTCGCGCTGTTCGTCGGACTGACGCTGCTCTGGCTGCTGGTCGACAGCTTCGTCAT GGCGCATTACCAGATCTGGCCGCTGCGCAAGGTGATGGTGCACTACAGCGGTGTGCTCGGCATCGCCGCGATGAGCGTGG CGGTGATACTGGCGGCGCGGCCACGGCGCTTCGAACGCTTCTTCGACGGCCTGGACAAGACCTATCGGCTGCACAAGTGG CTGGGCATCAGCGCCCTGGTGATCGCCATCTTCCACTGGGGCTGGGGCCAGATTCCGAAATGGCTGGTGGGTTTCGGCTG GCTGGAGCGACCGGCTCGGCGCGCCGGCGAGGGCCAGGTTCACGAAGGCATCTTCGCCCTGCTGCAACGCTTTCGCGGCA TCGCGGAGACCATCGGCGAATGGGCCTTCTATGCCGCGGTCATCCTCATCGTGCTGGCACTGGTCAAGCGCTTCCCCTAC CGCTGGTTCTTCCGCACCCACCGCTGGCTGGCACTGGTCTACCTGGCGCTGGTGGTACACGCGGTGGTGCTGACGCCGCC GGACTACTGGACGTCGCCGCTGGGCCTGGTGCTGGCCGTGCTCATGGCCGCCGGCTCGCTGGCCGCCTGCATCTCGCTAC TGCGCCGCATCGGCCGCAAGCATCAGGTGGTAGGCCGCATCGAAAGCCTGACCCATCACCGCGACAACCGCGTGCTGCGC GTCGACATCAAGCTCGATGGCGCCTGGCCGGGACACAAGGCCGGGCAGTTCGCCTTCGTCACCTTCGACGACAAGGAAGG GCCGCACCCCTTCAGCCTCTCCTCGGCCTGGTGCAACGACGGCCGGCTGGCCTTCTCCATCAAGGGCCTCGGCGACTACA CCCGCACCCTGCCCCAGACGCTCAAGGTCGGCGACCCGGTGAAGGTCGAAGGCCCCTATGGCTGCTTCGATTTCCACAGC CGCAAGCCGCGGCAGATCTGGGTCGCCGGCGGCATCGGTATCGCGCCGTTCATCGGCCGCCTGCAGGCGCTAGCCGACAG CGGTAACGGGGACAACGTCGACTTCTTCTACTGCACCAGCGCGCCCGACCAGGGCTTCATCGAGCGCATCCGCGAGCTGG CCGAACGCGCCCGGGTGCGCCTGCACGTGCTGGTCGCCAGCGAAGGCGGGCGGCTGACGCCCGAACGCCTGCGCCAGCTG GCGCCGCAGTGGCAGGACAGTGACGTCTGGTTCTGCGGCCCTGCCGGTTTCGGTCAGGACCTCAGCCGTGACCTGCAGCG GCGCGGCCTGCCGGCGTGGGATTTCCATCAGGAACTGTTCAACATGCGCTGA
Upstream 100 bases:
>100_bases GACCGCTGTGCTACTGACCACGGTCATGGCAGTGGCATGGCAGCAGGGGGATGCTCAAGGAAGCTCGAAATAGGGATGTC AGCTGGGAGGCTTGCCCAAG
Downstream 100 bases:
>100_bases CGCACGGTCGGCTTGCGCCTGGCAGGCGACAATCCGGCATCGGTCCGCCGGCGTCGGCGGGCCGCGCCCCCGTCACCAGA GCAAGGATGCTCGCCATGCC
Product: putative flavocytochrome
Products: NA
Alternate protein names: Ferric Reductase Domain-Containing Protein; Flavodoxin Oxidoreductase; Flavocytochrome; Ferric Reductase-Like Transmembrane Component-Like; Ferric Reductase; Ferric Reductase Domain Protein Transmembrane Component; Membrane Flavodoxin Oxidoreductase; Oxidoreductase Membrane Protein; Ferredoxin Reductase; Membrane-Bound Oxidoreductase; Flavocytochrome Protein; Hmp Protein; Ferric Reductase Like Transmembrane Component Family; Flavocytochrome Subuit Of Oxidoreductase
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MRQIKLTYVALFVGLTLLWLLVDSFVMAHYQIWPLRKVMVHYSGVLGIAAMSVAVILAARPRRFERFFDGLDKTYRLHKW LGISALVIAIFHWGWGQIPKWLVGFGWLERPARRAGEGQVHEGIFALLQRFRGIAETIGEWAFYAAVILIVLALVKRFPY RWFFRTHRWLALVYLALVVHAVVLTPPDYWTSPLGLVLAVLMAAGSLAACISLLRRIGRKHQVVGRIESLTHHRDNRVLR VDIKLDGAWPGHKAGQFAFVTFDDKEGPHPFSLSSAWCNDGRLAFSIKGLGDYTRTLPQTLKVGDPVKVEGPYGCFDFHS RKPRQIWVAGGIGIAPFIGRLQALADSGNGDNVDFFYCTSAPDQGFIERIRELAERARVRLHVLVASEGGRLTPERLRQL APQWQDSDVWFCGPAGFGQDLSRDLQRRGLPAWDFHQELFNMR
Sequences:
>Translated_443_residues MRQIKLTYVALFVGLTLLWLLVDSFVMAHYQIWPLRKVMVHYSGVLGIAAMSVAVILAARPRRFERFFDGLDKTYRLHKW LGISALVIAIFHWGWGQIPKWLVGFGWLERPARRAGEGQVHEGIFALLQRFRGIAETIGEWAFYAAVILIVLALVKRFPY RWFFRTHRWLALVYLALVVHAVVLTPPDYWTSPLGLVLAVLMAAGSLAACISLLRRIGRKHQVVGRIESLTHHRDNRVLR VDIKLDGAWPGHKAGQFAFVTFDDKEGPHPFSLSSAWCNDGRLAFSIKGLGDYTRTLPQTLKVGDPVKVEGPYGCFDFHS RKPRQIWVAGGIGIAPFIGRLQALADSGNGDNVDFFYCTSAPDQGFIERIRELAERARVRLHVLVASEGGRLTPERLRQL APQWQDSDVWFCGPAGFGQDLSRDLQRRGLPAWDFHQELFNMR >Mature_443_residues MRQIKLTYVALFVGLTLLWLLVDSFVMAHYQIWPLRKVMVHYSGVLGIAAMSVAVILAARPRRFERFFDGLDKTYRLHKW LGISALVIAIFHWGWGQIPKWLVGFGWLERPARRAGEGQVHEGIFALLQRFRGIAETIGEWAFYAAVILIVLALVKRFPY RWFFRTHRWLALVYLALVVHAVVLTPPDYWTSPLGLVLAVLMAAGSLAACISLLRRIGRKHQVVGRIESLTHHRDNRVLR VDIKLDGAWPGHKAGQFAFVTFDDKEGPHPFSLSSAWCNDGRLAFSIKGLGDYTRTLPQTLKVGDPVKVEGPYGCFDFHS RKPRQIWVAGGIGIAPFIGRLQALADSGNGDNVDFFYCTSAPDQGFIERIRELAERARVRLHVLVASEGGRLTPERLRQL APQWQDSDVWFCGPAGFGQDLSRDLQRRGLPAWDFHQELFNMR
Specific function: Unknown
COG id: COG4097
COG function: function code P; Predicted ferric reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 50277; Mature: 50277
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQIKLTYVALFVGLTLLWLLVDSFVMAHYQIWPLRKVMVHYSGVLGIAAMSVAVILAAR CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRRFERFFDGLDKTYRLHKWLGISALVIAIFHWGWGQIPKWLVGFGWLERPARRAGEGQV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCH HEGIFALLQRFRGIAETIGEWAFYAAVILIVLALVKRFPYRWFFRTHRWLALVYLALVVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AVVLTPPDYWTSPLGLVLAVLMAAGSLAACISLLRRIGRKHQVVGRIESLTHHRDNRVLR HHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEE VDIKLDGAWPGHKAGQFAFVTFDDKEGPHPFSLSSAWCNDGRLAFSIKGLGDYTRTLPQT EEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH LKVGDPVKVEGPYGCFDFHSRKPRQIWVAGGIGIAPFIGRLQALADSGNGDNVDFFYCTS HCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECC APDQGFIERIRELAERARVRLHVLVASEGGRLTPERLRQLAPQWQDSDVWFCGPAGFGQD CCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCHH LSRDLQRRGLPAWDFHQELFNMR HHHHHHHCCCCCHHHHHHHHCCC >Mature Secondary Structure MRQIKLTYVALFVGLTLLWLLVDSFVMAHYQIWPLRKVMVHYSGVLGIAAMSVAVILAAR CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRRFERFFDGLDKTYRLHKWLGISALVIAIFHWGWGQIPKWLVGFGWLERPARRAGEGQV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCH HEGIFALLQRFRGIAETIGEWAFYAAVILIVLALVKRFPYRWFFRTHRWLALVYLALVVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AVVLTPPDYWTSPLGLVLAVLMAAGSLAACISLLRRIGRKHQVVGRIESLTHHRDNRVLR HHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEE VDIKLDGAWPGHKAGQFAFVTFDDKEGPHPFSLSSAWCNDGRLAFSIKGLGDYTRTLPQT EEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH LKVGDPVKVEGPYGCFDFHSRKPRQIWVAGGIGIAPFIGRLQALADSGNGDNVDFFYCTS HCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECC APDQGFIERIRELAERARVRLHVLVASEGGRLTPERLRQLAPQWQDSDVWFCGPAGFGQD CCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCHH LSRDLQRRGLPAWDFHQELFNMR HHHHHHHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA