| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is aceE [H]
Identifier: 146284164
GI number: 146284164
Start: 4168990
End: 4171635
Strand: Direct
Name: aceE [H]
Synonym: PST_3852
Alternate gene names: 146284164
Gene position: 4168990-4171635 (Clockwise)
Preceding gene: 146284143
Following gene: 146284165
Centisome position: 91.28
GC content: 63.23
Gene sequence:
>2646_bases ATGCAAGATCTCGATCCCGTCGAAACCCAGGAATGGCTGGACGCCCTCGAGTCCGTCCTCGACCGCGAGGGTGAAGACCG CGCTCACTACCTGATGACCCGGATGGGCGAACTGGCCACACGTAGCGGTACTCCGCTGCCCTACGGCATCACCACGCCGT ACCGCAACACCATCCCCGTCACCCGTGAAGCCAAGATGCCCGGCGACCTGTTCATGGAGCGTCGAATCCGCTCCCTGGTC CGCTGGAATGCTCTGGCCATGGTGATGCGTGCGAATCTGAAGGATCCGGACCTGGGCGGCCACATCTCCACCTTTGCCTC CAGCGCGACGCTCTACGACATCGGCTTCAACTACTTCTTCCAGGCGCCGACCGAAGAGCATGGCGGCGACCTGATCTACT ACCAGGGCCACGCCTCCCCCGGCATTTACGCCCGCGCCTTCCTGGAAGGCCGCCTGACCGAAGAGCAGATGCTCAACTTC CGCCAGGAAGTCGATGGCAAGGGTCTGTCGAGCTACCCGCACCCGCACCTGATGCCAGACTTCTGGCAGTTCCCGACCGT GTCCATGGGCCTCGGCCCGATCACTGCGATCTACCAGGCACGCTTCATGAAGTACCTGGAAAACCGCGGTTTCATTCCGA AGGGCAAGCAGCGCGTCTGGTGCTTCATCGGTGACGGCGAGTGCGATGAGCCGGAAACCCTCGGCGCCATCTCCCTGGCC GGTCGTGAAAACCTCGACAACCTGGTGTTCGTCATCAACTGCAACCTGCAGCGCCTGGACGGCCCAGTGCGCGGCAACAG CAAGATCATCCAGGAACTGGAAGGCGTGTTCAAAGGCGCCAACTGGAACGTCAACAAGGTCGTCTGGGGCCGCCTGTGGG ATCCGCTGTTCGCCGCCGACGAAGACGGCCGCATGCAGCGCCGGATGGACGAGGCGATCGACGGCGAGTACCAGAACTAC AAGGCCAAGGACGGCGCCTATGTGCGCAAGCACTTCTTCGGCGCGGATCCCGAGCTGCTCAAGCGCGTCGAGAACATGTC CGACGAGGAAGTCTGGAAGCTCAACCGCGGCGGCCACGACCCCTACAAGGTCTATGCGGCCTACCATCAGGCGGTCAACC ACAAGGGCCAGCCGACGGTCATCCTGGCCAAGACCATCAAGGGCTACGGCACCGGTGCCGGTGAGGCGAAGAACATCGCC CACAACACCAAGAAGGTCGATATCGACAGCCTGAAGAAATTCCGCGATCGCTTCGACATCCCGGTCAACGATTCGCAGCT CGAAGAGTTGCCCTTCTACCGTCCGGCCGAAGACAGCGCCGAAATGCGCTACCTGCGCAAGTGCCGCGAGAAACTCGGCG GTTCGCTGCCGCAGCGCCGGCCGAAGAGCTTCAGCATCCCGACGCCGCCGCTGGACACGCTCAAGGCCGTGCTCGACGGT TCCGGTGACCGCGAGATTTCCACCACCATGGCCTTCGGTCGGATTCTCTCGCAACTGGTCAAGGACAAGGATCTGGGCAA GCGCATCGTGCCGATCCTCGCCGACGAGGCACGCACCTTCGGCATGGAAGGCATGTTCCGCCAGCTGGGTATCTACTCCC CGGTGGGGCAACTGTACGAGCCGGTCGACCGCGACCAGGTGATGTACTACCGCGAAGAAAAGGACGGCCAGATCCTCCAG GAAGGCCTCAACGAGGCCGGCGCCTTCTCCTCGTTCATCGCCGCCGGTACCGCCTACAGCAACTACAACCAGCCGATGCT GCCGGTCTACATCTTCTATTCGATGTTCGGCTTCCAGCGTATCGGTGACCTGGCCTGGGCAGCCGGTGATGCCCAGACCC GCGGCTTCCTGCTGGGCGGCACCTCCGGGCGTACCACGCTCAACGGTGAAGGCCTGCAGCACGAGGACGGCCACAGCCAT ATCCTCGCCAGCACCATTCCCAACTGCCGCAGCTACGACCCCACCTACGGCTACGAGCTGGCGGTGATCGTGCATCACGG CATGCACGAGATGATGGAGCTGCAGAAGAGCGTCTACTACTACATCACCGTGATGAACGAGAACTACCAGCAGCCGGCCA TGCCGCAGGGTGTCGAGGACGGCATCATCAAGGGCATGTACCTGCTCGAAGAAGCCAAGGGCGACTTCAAGCACCGCGTT CAGCTGCTGGGATCGGGCACCATCCTGCGCGAAGTGCGCGCCGCCGTGGACATCCTCGCCAAGATGGGCGTCGGTGCCGA CGTCTGGAGCGTCACCAGCTTCAACGAGCTGCGCCGTGACGGCCTGGCCGTGGATCGCTGGAACCGCCTGCACCCGACCG AAGAGCCGCGCAAGAGCTACGTCCAGCAGTGCCTGGAAGGTCGCGACGGCCCGGTAGTGGCCTCGACCGATTACATGAAG CTGTTCGCCGATCAGATTCGCCAGTGGGTTCCTTCGCGCGAATACCAGGTACTGGGTACCGACGGCTTCGGCCGCAGCGA CTCGCGTGCCAAGCTGCGTGACTTCTTCGAAGTCGATCGTCGCTGGGTGGCCGTCGCCGCGCTGCAGGCACTCGCCGATC GCGGCGCCATCGAACGCAAGGTCGTGGCCGAGGCCATCACCGAGTTCGGTATCGACCCCGAGAAGCGCAATCCGCTGGAT TGCTGA
Upstream 100 bases:
>100_bases TACCTCCGGCACTCATCCAAGAACATTTCACGCGCCGCCCACAAAGCCGGCAGCGAAGCAGGCGACCGATTCTGGAAGCC TTTGCGCCATGGAGCAAGCC
Downstream 100 bases:
>100_bases TGCTGCGTGCGCACAGGAGAACCTATTGTGAGTGAAACCATACGCGTACCCGACATCGGCAGCGGTGAGGGTGAAGTGAT CGAGTTGTTCGTCAAGGTCG
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 881; Mature: 881
Protein sequence:
>881_residues MQDLDPVETQEWLDALESVLDREGEDRAHYLMTRMGELATRSGTPLPYGITTPYRNTIPVTREAKMPGDLFMERRIRSLV RWNALAMVMRANLKDPDLGGHISTFASSATLYDIGFNYFFQAPTEEHGGDLIYYQGHASPGIYARAFLEGRLTEEQMLNF RQEVDGKGLSSYPHPHLMPDFWQFPTVSMGLGPITAIYQARFMKYLENRGFIPKGKQRVWCFIGDGECDEPETLGAISLA GRENLDNLVFVINCNLQRLDGPVRGNSKIIQELEGVFKGANWNVNKVVWGRLWDPLFAADEDGRMQRRMDEAIDGEYQNY KAKDGAYVRKHFFGADPELLKRVENMSDEEVWKLNRGGHDPYKVYAAYHQAVNHKGQPTVILAKTIKGYGTGAGEAKNIA HNTKKVDIDSLKKFRDRFDIPVNDSQLEELPFYRPAEDSAEMRYLRKCREKLGGSLPQRRPKSFSIPTPPLDTLKAVLDG SGDREISTTMAFGRILSQLVKDKDLGKRIVPILADEARTFGMEGMFRQLGIYSPVGQLYEPVDRDQVMYYREEKDGQILQ EGLNEAGAFSSFIAAGTAYSNYNQPMLPVYIFYSMFGFQRIGDLAWAAGDAQTRGFLLGGTSGRTTLNGEGLQHEDGHSH ILASTIPNCRSYDPTYGYELAVIVHHGMHEMMELQKSVYYYITVMNENYQQPAMPQGVEDGIIKGMYLLEEAKGDFKHRV QLLGSGTILREVRAAVDILAKMGVGADVWSVTSFNELRRDGLAVDRWNRLHPTEEPRKSYVQQCLEGRDGPVVASTDYMK LFADQIRQWVPSREYQVLGTDGFGRSDSRAKLRDFFEVDRRWVAVAALQALADRGAIERKVVAEAITEFGIDPEKRNPLD C
Sequences:
>Translated_881_residues MQDLDPVETQEWLDALESVLDREGEDRAHYLMTRMGELATRSGTPLPYGITTPYRNTIPVTREAKMPGDLFMERRIRSLV RWNALAMVMRANLKDPDLGGHISTFASSATLYDIGFNYFFQAPTEEHGGDLIYYQGHASPGIYARAFLEGRLTEEQMLNF RQEVDGKGLSSYPHPHLMPDFWQFPTVSMGLGPITAIYQARFMKYLENRGFIPKGKQRVWCFIGDGECDEPETLGAISLA GRENLDNLVFVINCNLQRLDGPVRGNSKIIQELEGVFKGANWNVNKVVWGRLWDPLFAADEDGRMQRRMDEAIDGEYQNY KAKDGAYVRKHFFGADPELLKRVENMSDEEVWKLNRGGHDPYKVYAAYHQAVNHKGQPTVILAKTIKGYGTGAGEAKNIA HNTKKVDIDSLKKFRDRFDIPVNDSQLEELPFYRPAEDSAEMRYLRKCREKLGGSLPQRRPKSFSIPTPPLDTLKAVLDG SGDREISTTMAFGRILSQLVKDKDLGKRIVPILADEARTFGMEGMFRQLGIYSPVGQLYEPVDRDQVMYYREEKDGQILQ EGLNEAGAFSSFIAAGTAYSNYNQPMLPVYIFYSMFGFQRIGDLAWAAGDAQTRGFLLGGTSGRTTLNGEGLQHEDGHSH ILASTIPNCRSYDPTYGYELAVIVHHGMHEMMELQKSVYYYITVMNENYQQPAMPQGVEDGIIKGMYLLEEAKGDFKHRV QLLGSGTILREVRAAVDILAKMGVGADVWSVTSFNELRRDGLAVDRWNRLHPTEEPRKSYVQQCLEGRDGPVVASTDYMK LFADQIRQWVPSREYQVLGTDGFGRSDSRAKLRDFFEVDRRWVAVAALQALADRGAIERKVVAEAITEFGIDPEKRNPLD C >Mature_881_residues MQDLDPVETQEWLDALESVLDREGEDRAHYLMTRMGELATRSGTPLPYGITTPYRNTIPVTREAKMPGDLFMERRIRSLV RWNALAMVMRANLKDPDLGGHISTFASSATLYDIGFNYFFQAPTEEHGGDLIYYQGHASPGIYARAFLEGRLTEEQMLNF RQEVDGKGLSSYPHPHLMPDFWQFPTVSMGLGPITAIYQARFMKYLENRGFIPKGKQRVWCFIGDGECDEPETLGAISLA GRENLDNLVFVINCNLQRLDGPVRGNSKIIQELEGVFKGANWNVNKVVWGRLWDPLFAADEDGRMQRRMDEAIDGEYQNY KAKDGAYVRKHFFGADPELLKRVENMSDEEVWKLNRGGHDPYKVYAAYHQAVNHKGQPTVILAKTIKGYGTGAGEAKNIA HNTKKVDIDSLKKFRDRFDIPVNDSQLEELPFYRPAEDSAEMRYLRKCREKLGGSLPQRRPKSFSIPTPPLDTLKAVLDG SGDREISTTMAFGRILSQLVKDKDLGKRIVPILADEARTFGMEGMFRQLGIYSPVGQLYEPVDRDQVMYYREEKDGQILQ EGLNEAGAFSSFIAAGTAYSNYNQPMLPVYIFYSMFGFQRIGDLAWAAGDAQTRGFLLGGTSGRTTLNGEGLQHEDGHSH ILASTIPNCRSYDPTYGYELAVIVHHGMHEMMELQKSVYYYITVMNENYQQPAMPQGVEDGIIKGMYLLEEAKGDFKHRV QLLGSGTILREVRAAVDILAKMGVGADVWSVTSFNELRRDGLAVDRWNRLHPTEEPRKSYVQQCLEGRDGPVVASTDYMK LFADQIRQWVPSREYQVLGTDGFGRSDSRAKLRDFFEVDRRWVAVAALQALADRGAIERKVVAEAITEFGIDPEKRNPLD C
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=881, Percent_Identity=61.0669693530079, Blast_Score=1105, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 99637; Mature: 99637
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDLDPVETQEWLDALESVLDREGEDRAHYLMTRMGELATRSGTPLPYGITTPYRNTIPV CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TREAKMPGDLFMERRIRSLVRWNALAMVMRANLKDPDLGGHISTFASSATLYDIGFNYFF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEECCEEEE QAPTEEHGGDLIYYQGHASPGIYARAFLEGRLTEEQMLNFRQEVDGKGLSSYPHPHLMPD ECCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCH FWQFPTVSMGLGPITAIYQARFMKYLENRGFIPKGKQRVWCFIGDGECDEPETLGAISLA HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEC GRENLDNLVFVINCNLQRLDGPVRGNSKIIQELEGVFKGANWNVNKVVWGRLWDPLFAAD CCCCCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHCCC EDGRMQRRMDEAIDGEYQNYKAKDGAYVRKHFFGADPELLKRVENMSDEEVWKLNRGGHD CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCC PYKVYAAYHQAVNHKGQPTVILAKTIKGYGTGAGEAKNIAHNTKKVDIDSLKKFRDRFDI HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCC PVNDSQLEELPFYRPAEDSAEMRYLRKCREKLGGSLPQRRPKSFSIPTPPLDTLKAVLDG CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCC SGDREISTTMAFGRILSQLVKDKDLGKRIVPILADEARTFGMEGMFRQLGIYSPVGQLYE CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHC PVDRDQVMYYREEKDGQILQEGLNEAGAFSSFIAAGTAYSNYNQPMLPVYIFYSMFGFQR CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHH IGDLAWAAGDAQTRGFLLGGTSGRTTLNGEGLQHEDGHSHILASTIPNCRSYDPTYGYEL HHHHHHCCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCEEHHHCCCCCCCCCCCCCCEE AVIVHHGMHEMMELQKSVYYYITVMNENYQQPAMPQGVEDGIIKGMYLLEEAKGDFKHRV EEEEHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH QLLGSGTILREVRAAVDILAKMGVGADVWSVTSFNELRRDGLAVDRWNRLHPTEEPRKSY HHHCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHCCCCHHCCCCCCCCCCHHHHH VQQCLEGRDGPVVASTDYMKLFADQIRQWVPSREYQVLGTDGFGRSDSRAKLRDFFEVDR HHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH RWVAVAALQALADRGAIERKVVAEAITEFGIDPEKRNPLDC HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MQDLDPVETQEWLDALESVLDREGEDRAHYLMTRMGELATRSGTPLPYGITTPYRNTIPV CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TREAKMPGDLFMERRIRSLVRWNALAMVMRANLKDPDLGGHISTFASSATLYDIGFNYFF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEECCEEEE QAPTEEHGGDLIYYQGHASPGIYARAFLEGRLTEEQMLNFRQEVDGKGLSSYPHPHLMPD ECCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCH FWQFPTVSMGLGPITAIYQARFMKYLENRGFIPKGKQRVWCFIGDGECDEPETLGAISLA HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEC GRENLDNLVFVINCNLQRLDGPVRGNSKIIQELEGVFKGANWNVNKVVWGRLWDPLFAAD CCCCCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHCCC EDGRMQRRMDEAIDGEYQNYKAKDGAYVRKHFFGADPELLKRVENMSDEEVWKLNRGGHD CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCC PYKVYAAYHQAVNHKGQPTVILAKTIKGYGTGAGEAKNIAHNTKKVDIDSLKKFRDRFDI HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCC PVNDSQLEELPFYRPAEDSAEMRYLRKCREKLGGSLPQRRPKSFSIPTPPLDTLKAVLDG CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCC SGDREISTTMAFGRILSQLVKDKDLGKRIVPILADEARTFGMEGMFRQLGIYSPVGQLYE CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHC PVDRDQVMYYREEKDGQILQEGLNEAGAFSSFIAAGTAYSNYNQPMLPVYIFYSMFGFQR CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHH IGDLAWAAGDAQTRGFLLGGTSGRTTLNGEGLQHEDGHSHILASTIPNCRSYDPTYGYEL HHHHHHCCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCEEHHHCCCCCCCCCCCCCCEE AVIVHHGMHEMMELQKSVYYYITVMNENYQQPAMPQGVEDGIIKGMYLLEEAKGDFKHRV EEEEHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH QLLGSGTILREVRAAVDILAKMGVGADVWSVTSFNELRRDGLAVDRWNRLHPTEEPRKSY HHHCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHCCCCHHCCCCCCCCCCHHHHH VQQCLEGRDGPVVASTDYMKLFADQIRQWVPSREYQVLGTDGFGRSDSRAKLRDFFEVDR HHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH RWVAVAALQALADRGAIERKVVAEAITEFGIDPEKRNPLDC HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9171401; 10984043 [H]