| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146284132
Identifier: 146284132
GI number: 146284132
Start: 4132300
End: 4133475
Strand: Direct
Name: 146284132
Synonym: PST_3820
Alternate gene names: NA
Gene position: 4132300-4133475 (Clockwise)
Preceding gene: 146284131
Following gene: 146284133
Centisome position: 90.47
GC content: 68.71
Gene sequence:
>1176_bases ATGCCCGAATCCCTCAGCACCGACGTCCTGATCGTTGGCGGCGGCGTCGCCGGCCTTTGGCTGAACGCGCGCCTGCGCCG ACTGGGTTTTGCCACCCTGCTGGTCGACAAGGGAGCACTGGGTGGCGGGCAGAGCGTGAAGTCCCAGGGCATCATCCATG GCGGCACCAAGTACGCGCTGAGCGGTGCGCTCACCGGTGCCTCCGAGGCGATAGCGGACATGCCGCGGCGCTGGCGCGAA GCGCTCGAAGGCAAGGGCGAACTGGACCTCAGCGGCGTGCGTCTGTTGTCCGATGCACACTATCTGTGGTCGCCAGGCAC CCTGGCCGGCAACCTCACCAGCTTCTTCGCCAGCAAGGCGGTGCGCTCGCGGGTCGGCCAGGTCAAGGGCGATGAGCTGC CGCCTGCGCTGCAGCATCCACGGTTCAAGGGCAAGGTCTATCGGCTCAGCGAGCTGGTGCTGGACGTGCCCAGCCTGATC GCCCGGCTGGCCGAGCTGGCTGGCGACAGCCTGCTGGCCTGCGAGCAGATCGAACCGCTGCTCGACGACAACGAGCTGGT CGGGTTGCGCGTCGATGGTCGCGAGATCCGCGCCCAGCGCATCGTGTTCAGCGCTGGTGGCGGGACTGCCGAGCTGCTCG CGTCGCTCGGCCTGCAACAACCGGCCATGCAGCGCCGTCCGCTGCACATGGTCATCGTCAAGGCGCCCACGCTCAAGCCG CTCTATGCCCATTGCCTGGGCGGCGGCACCAAACCGCGGATCACGGTCACCAGCCATCCGACAGCGGACGGCGAGTGGCT CTGGTATCTCGGCGGCGACCTGGCCGAAGCCGATGGCGTGGCGCGCGACGAAGCCACTCAGATCGCCGCGGCGAAAAAGG AACTGGCCGAACTGGTGCCCTGGATCGACCTGTCCTCCGCGCAATGGGCCACGCTGCGTATCGACCGCGCCGAGCCTGCA CAATCGGCCCTCGCCCGTCCGGACAACGCCTTCCTTGCCGAGCAGGGCCGACTGCTGGCCGGGTGGCCGACCAAGCTGGC GCTGTCCCCCGACTTCTCCGACCGCGTCGAAGCCGCCCTCGCCCGTGACGGCATTCGCCCGGCCAACCATCCCGCACTAC CTCAACTGCCACGTCCGCCGCTGACCGGGCCGTTCTGGGAAGGGCTGCTGCCATGA
Upstream 100 bases:
>100_bases GGTGTGGTGGTCATCCAGTTGTTCTCCCGCAGTGCAGGCCACTAAGCTGCCGGCGGACTGCAGTTATACTGCGCGACCGT TTACCCAATGAGGTCTGCAC
Downstream 100 bases:
>100_bases ACGCGACGCTGCATGACCTGCACCGCCCGCTGGGCAAAACCGGCCTGCGCATTTCGCCGTTGGGTCTGGGCACGGTCAAA CTGGGTCGCGACCAGGGCGT
Product: oxidoreductase, FAD-binding
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase Superfamily Protein; Glycerol-3-Phosphate Dehydrogenase; FAD Dependent Oxidoreductase Domain Protein
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MPESLSTDVLIVGGGVAGLWLNARLRRLGFATLLVDKGALGGGQSVKSQGIIHGGTKYALSGALTGASEAIADMPRRWRE ALEGKGELDLSGVRLLSDAHYLWSPGTLAGNLTSFFASKAVRSRVGQVKGDELPPALQHPRFKGKVYRLSELVLDVPSLI ARLAELAGDSLLACEQIEPLLDDNELVGLRVDGREIRAQRIVFSAGGGTAELLASLGLQQPAMQRRPLHMVIVKAPTLKP LYAHCLGGGTKPRITVTSHPTADGEWLWYLGGDLAEADGVARDEATQIAAAKKELAELVPWIDLSSAQWATLRIDRAEPA QSALARPDNAFLAEQGRLLAGWPTKLALSPDFSDRVEAALARDGIRPANHPALPQLPRPPLTGPFWEGLLP
Sequences:
>Translated_391_residues MPESLSTDVLIVGGGVAGLWLNARLRRLGFATLLVDKGALGGGQSVKSQGIIHGGTKYALSGALTGASEAIADMPRRWRE ALEGKGELDLSGVRLLSDAHYLWSPGTLAGNLTSFFASKAVRSRVGQVKGDELPPALQHPRFKGKVYRLSELVLDVPSLI ARLAELAGDSLLACEQIEPLLDDNELVGLRVDGREIRAQRIVFSAGGGTAELLASLGLQQPAMQRRPLHMVIVKAPTLKP LYAHCLGGGTKPRITVTSHPTADGEWLWYLGGDLAEADGVARDEATQIAAAKKELAELVPWIDLSSAQWATLRIDRAEPA QSALARPDNAFLAEQGRLLAGWPTKLALSPDFSDRVEAALARDGIRPANHPALPQLPRPPLTGPFWEGLLP >Mature_390_residues PESLSTDVLIVGGGVAGLWLNARLRRLGFATLLVDKGALGGGQSVKSQGIIHGGTKYALSGALTGASEAIADMPRRWREA LEGKGELDLSGVRLLSDAHYLWSPGTLAGNLTSFFASKAVRSRVGQVKGDELPPALQHPRFKGKVYRLSELVLDVPSLIA RLAELAGDSLLACEQIEPLLDDNELVGLRVDGREIRAQRIVFSAGGGTAELLASLGLQQPAMQRRPLHMVIVKAPTLKPL YAHCLGGGTKPRITVTSHPTADGEWLWYLGGDLAEADGVARDEATQIAAAKKELAELVPWIDLSSAQWATLRIDRAEPAQ SALARPDNAFLAEQGRLLAGWPTKLALSPDFSDRVEAALARDGIRPANHPALPQLPRPPLTGPFWEGLLP
Specific function: Unknown
COG id: COG0578
COG function: function code C; Glycerol-3-phosphate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41759; Mature: 41628
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESLSTDVLIVGGGVAGLWLNARLRRLGFATLLVDKGALGGGQSVKSQGIIHGGTKYAL CCCCCCCCEEEECCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEECCCHHHH SGALTGASEAIADMPRRWREALEGKGELDLSGVRLLSDAHYLWSPGTLAGNLTSFFASKA HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEECCCCCHHHHHHHHHHHH VRSRVGQVKGDELPPALQHPRFKGKVYRLSELVLDVPSLIARLAELAGDSLLACEQIEPL HHHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCC LDDNELVGLRVDGREIRAQRIVFSAGGGTAELLASLGLQQPAMQRRPLHMVIVKAPTLKP CCCCCEEEEEECCHHEEEEEEEEECCCCHHHHHHHHCCCCCHHHCCCEEEEEEECCCCCH LYAHCLGGGTKPRITVTSHPTADGEWLWYLGGDLAEADGVARDEATQIAAAKKELAELVP HHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHCC WIDLSSAQWATLRIDRAEPAQSALARPDNAFLAEQGRLLAGWPTKLALSPDFSDRVEAAL CCCCCCCCEEEEEECCCCCHHHHHCCCCCCHHHHCCCEEECCCCEEEECCCHHHHHHHHH ARDGIRPANHPALPQLPRPPLTGPFWEGLLP HHCCCCCCCCCCCCCCCCCCCCCCHHHCCCC >Mature Secondary Structure PESLSTDVLIVGGGVAGLWLNARLRRLGFATLLVDKGALGGGQSVKSQGIIHGGTKYAL CCCCCCCEEEECCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEECCCHHHH SGALTGASEAIADMPRRWREALEGKGELDLSGVRLLSDAHYLWSPGTLAGNLTSFFASKA HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEECCCCCHHHHHHHHHHHH VRSRVGQVKGDELPPALQHPRFKGKVYRLSELVLDVPSLIARLAELAGDSLLACEQIEPL HHHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCC LDDNELVGLRVDGREIRAQRIVFSAGGGTAELLASLGLQQPAMQRRPLHMVIVKAPTLKP CCCCCEEEEEECCHHEEEEEEEEECCCCHHHHHHHHCCCCCHHHCCCEEEEEEECCCCCH LYAHCLGGGTKPRITVTSHPTADGEWLWYLGGDLAEADGVARDEATQIAAAKKELAELVP HHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHCC WIDLSSAQWATLRIDRAEPAQSALARPDNAFLAEQGRLLAGWPTKLALSPDFSDRVEAAL CCCCCCCCEEEEEECCCCCHHHHHCCCCCCHHHHCCCEEECCCCEEEECCCHHHHHHHHH ARDGIRPANHPALPQLPRPPLTGPFWEGLLP HHCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA