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The map label for this gene is yabI [H]

Identifier: 146284098

GI number: 146284098

Start: 4093583

End: 4095034

Strand: Direct

Name: yabI [H]

Synonym: PST_3786

Alternate gene names: 146284098

Gene position: 4093583-4095034 (Clockwise)

Preceding gene: 146284084

Following gene: 146284102

Centisome position: 89.63

GC content: 67.84

Gene sequence:

>1452_bases
ATGCGGTGGCGCACGGCATTCGTCCGCCGCGACGGCAGCGTACGCATGGCAGTCCCGACGAGTATGCTTTGCCGAGGAAA
CCCCGCGCCCTCTGGCCGGGTCGAAAGGCGGTCTTGCTTCAAGGAAACCGGCATGGGCCAATGGCTCGAAACCCTTACCC
AATGGCTGGCCGCCAACCCCCAATGGCTGGGGCTGGCGCTCGTGATCGTCGCCTGCATGGAGTGCCTGGCGGTGGTCGGG
CTGATCGTGCCGGGGACGGTGATGGTCTTCGCCATCGCGGTGCTGGCCGGCAACGGCGTGCTGACCCTGGGCGAAACCCT
GGTGCTGGGCTTCATCGGCGGGCTGCTCGGCGACCTGCTGTCCTACGCCCTGGGTCGCCGTTATCACCAGGGCATCCGCA
GCCTGCGCGGCCTGCGCGACCATCCCGAGTGGCTGCTACGTGCCGAGCATTACTTCCAGCGCTACGGCGTTGCCAGCCTG
CTGGTCGGTCGCTTCATCGGCCCGCTGCGGCCGATGCTGCCGATGACCGCCGGCATGCTCGACATGCCGTTCGGGCGCTT
TCTGCTGGTCAGCCTGTGCGCCGCCGCCGGCTGGTCGATGGCCTATCTGCTGCCCGGCTGGAGCGCTGGCGCGGCCATGC
GTCTGCCGCTGGAGGAAGGTTTCTGGAGCGAGGCGGCGGTGGTCGTCGGCGCATTGCTGACGCTGATCGCCACCACTGCC
TTCGGCAGTCTGCGCCAGCTGCGCTGGGTCACTGCACTGGCGACCGGCCTGAGCATCGCGATCCTGCTCGGACTGTTTCT
GGGCTGGCCGCACCTCAAGGAGCTCGACGAAGGGCTGCTTGCGGTGATCCAGGGCGAACGCAGCATCACACTCGATCGGG
TCATGGTGCTGATCACACGCGTGGGCGACTTCCAGACCCAGCTCTGGGCCGGCGTATTGCTGTGCGTGCTGCTCCTGGTC
CTGCGCCAGTGGCGTGCCGCGATCTTTTCCATCCTTACCCTGCTGGGCACGGCCATGGCCAACGGCGCACTCAAGGCCTC
CTTCGCCCGTGTCAGGCCGGAGGTTCTGATGGAGCCGCTGAGCAGCTACAGCTTTCCCAGCGGGCACAGTTCGGCCGCGT
TCGCCTTTTTTCTCACCCTGGGCGTACTCGCCGGCCGCGACCAGCCGCCGCGCCTGCGCCTGGCCTGGCTGGTGCTGGCC
AGCCTGCCGGCCACGGCGATAGCGCTTTCGCGGGTTTACCTGGGGGTGCACTGGATGACCGACGTCACCGCCGGTGCATT
GCTCGCGGCGAGCATCTGCGCACTCAGCCTGACCCTGGTGCAATGGCGCGCACCGATGGCGGCGCTGCCGGCCAAGGTGT
GGTGGCTGATCCTGCCGGCCTGCCTGGGCCTGCTCGGTGCGTTCAGCGTCTGGGCGCTACCGACGGCGATGCAGATGTAT
CGCTATCAGTAG

Upstream 100 bases:

>100_bases
AGTACTGACTCGGTCATGGATCTAGCTGGCCTGACTGAAGGGAAAGCGGCTGATTATAGCCACGCTGCGCGCCCGCGCAC
AGCGGCGCCGGGCGAAAGGC

Downstream 100 bases:

>100_bases
TACGACGGCTCCACCGCTACGCCCCTTCTTGCAGCTGCTCGAGCAGGTTCTGAATCTGCGCCAGTTGCAGCTCCGGGTCG
TCCAGCCCAAGCAGTTCGAC

Product: PAP2 family protein/DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MRWRTAFVRRDGSVRMAVPTSMLCRGNPAPSGRVERRSCFKETGMGQWLETLTQWLAANPQWLGLALVIVACMECLAVVG
LIVPGTVMVFAIAVLAGNGVLTLGETLVLGFIGGLLGDLLSYALGRRYHQGIRSLRGLRDHPEWLLRAEHYFQRYGVASL
LVGRFIGPLRPMLPMTAGMLDMPFGRFLLVSLCAAAGWSMAYLLPGWSAGAAMRLPLEEGFWSEAAVVVGALLTLIATTA
FGSLRQLRWVTALATGLSIAILLGLFLGWPHLKELDEGLLAVIQGERSITLDRVMVLITRVGDFQTQLWAGVLLCVLLLV
LRQWRAAIFSILTLLGTAMANGALKASFARVRPEVLMEPLSSYSFPSGHSSAAFAFFLTLGVLAGRDQPPRLRLAWLVLA
SLPATAIALSRVYLGVHWMTDVTAGALLAASICALSLTLVQWRAPMAALPAKVWWLILPACLGLLGAFSVWALPTAMQMY
RYQ

Sequences:

>Translated_483_residues
MRWRTAFVRRDGSVRMAVPTSMLCRGNPAPSGRVERRSCFKETGMGQWLETLTQWLAANPQWLGLALVIVACMECLAVVG
LIVPGTVMVFAIAVLAGNGVLTLGETLVLGFIGGLLGDLLSYALGRRYHQGIRSLRGLRDHPEWLLRAEHYFQRYGVASL
LVGRFIGPLRPMLPMTAGMLDMPFGRFLLVSLCAAAGWSMAYLLPGWSAGAAMRLPLEEGFWSEAAVVVGALLTLIATTA
FGSLRQLRWVTALATGLSIAILLGLFLGWPHLKELDEGLLAVIQGERSITLDRVMVLITRVGDFQTQLWAGVLLCVLLLV
LRQWRAAIFSILTLLGTAMANGALKASFARVRPEVLMEPLSSYSFPSGHSSAAFAFFLTLGVLAGRDQPPRLRLAWLVLA
SLPATAIALSRVYLGVHWMTDVTAGALLAASICALSLTLVQWRAPMAALPAKVWWLILPACLGLLGAFSVWALPTAMQMY
RYQ
>Mature_483_residues
MRWRTAFVRRDGSVRMAVPTSMLCRGNPAPSGRVERRSCFKETGMGQWLETLTQWLAANPQWLGLALVIVACMECLAVVG
LIVPGTVMVFAIAVLAGNGVLTLGETLVLGFIGGLLGDLLSYALGRRYHQGIRSLRGLRDHPEWLLRAEHYFQRYGVASL
LVGRFIGPLRPMLPMTAGMLDMPFGRFLLVSLCAAAGWSMAYLLPGWSAGAAMRLPLEEGFWSEAAVVVGALLTLIATTA
FGSLRQLRWVTALATGLSIAILLGLFLGWPHLKELDEGLLAVIQGERSITLDRVMVLITRVGDFQTQLWAGVLLCVLLLV
LRQWRAAIFSILTLLGTAMANGALKASFARVRPEVLMEPLSSYSFPSGHSSAAFAFFLTLGVLAGRDQPPRLRLAWLVLA
SLPATAIALSRVYLGVHWMTDVTAGALLAASICALSLTLVQWRAPMAALPAKVWWLILPACLGLLGAFSVWALPTAMQMY
RYQ

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=152, Percent_Identity=40.1315789473684, Blast_Score=118, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 52529; Mature: 52529

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWRTAFVRRDGSVRMAVPTSMLCRGNPAPSGRVERRSCFKETGMGQWLETLTQWLAANP
CCCHHHHHCCCCCEEEECCHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC
QWLGLALVIVACMECLAVVGLIVPGTVMVFAIAVLAGNGVLTLGETLVLGFIGGLLGDLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SYALGRRYHQGIRSLRGLRDHPEWLLRAEHYFQRYGVASLLVGRFIGPLRPMLPMTAGML
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DMPFGRFLLVSLCAAAGWSMAYLLPGWSAGAAMRLPLEEGFWSEAAVVVGALLTLIATTA
HCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHH
FGSLRQLRWVTALATGLSIAILLGLFLGWPHLKELDEGLLAVIQGERSITLDRVMVLITR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VGDFQTQLWAGVLLCVLLLVLRQWRAAIFSILTLLGTAMANGALKASFARVRPEVLMEPL
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHH
SSYSFPSGHSSAAFAFFLTLGVLAGRDQPPRLRLAWLVLASLPATAIALSRVYLGVHWMT
HHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
DVTAGALLAASICALSLTLVQWRAPMAALPAKVWWLILPACLGLLGAFSVWALPTAMQMY
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYQ
CCC
>Mature Secondary Structure
MRWRTAFVRRDGSVRMAVPTSMLCRGNPAPSGRVERRSCFKETGMGQWLETLTQWLAANP
CCCHHHHHCCCCCEEEECCHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC
QWLGLALVIVACMECLAVVGLIVPGTVMVFAIAVLAGNGVLTLGETLVLGFIGGLLGDLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SYALGRRYHQGIRSLRGLRDHPEWLLRAEHYFQRYGVASLLVGRFIGPLRPMLPMTAGML
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DMPFGRFLLVSLCAAAGWSMAYLLPGWSAGAAMRLPLEEGFWSEAAVVVGALLTLIATTA
HCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHH
FGSLRQLRWVTALATGLSIAILLGLFLGWPHLKELDEGLLAVIQGERSITLDRVMVLITR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VGDFQTQLWAGVLLCVLLLVLRQWRAAIFSILTLLGTAMANGALKASFARVRPEVLMEPL
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHH
SSYSFPSGHSSAAFAFFLTLGVLAGRDQPPRLRLAWLVLASLPATAIALSRVYLGVHWMT
HHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
DVTAGALLAASICALSLTLVQWRAPMAALPAKVWWLILPACLGLLGAFSVWALPTAMQMY
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]