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The map label for this gene is bkdR [H]

Identifier: 146284028

GI number: 146284028

Start: 4017377

End: 4017946

Strand: Direct

Name: bkdR [H]

Synonym: PST_3716

Alternate gene names: 146284028

Gene position: 4017377-4017946 (Clockwise)

Preceding gene: 146284027

Following gene: 146284029

Centisome position: 87.96

GC content: 61.93

Gene sequence:

>570_bases
TTGCGAAGATTGCTGATCAACGCACCTCTTGCGCAATCAACAGCCCTGGATTCATCATCGCGCGCAATCCGATCCCAAAG
GCATCCCTCCATGAGCAAACTCGACCGCTACGACCTGCGCATTCTCGCCGAACTGCAGCACGACGCCCGCATCTCGAACC
AGGAGTTGGCCGAACGCATCGGACTGTCGCCCTCGCCCTGCTCCCGCCGCGTCAAGCAACTGGAAGACGACGGCTATATC
GCTCGCCAGGTAGCCCTGCTCGACCGCAAGAAGCTCGGCCTGACACTGACCGCCTACGTGCTGATCGGCATGGACCGGCA
CACCCCGGAGCGCTTCGAGCACTTCGAGGGCGTGATCGGACGCTGCCCGGAAGTGCTGGAATGCAGCCTGGTCACCGGCA
TGGATGCCGACTACCAGCTCAAGGTGGTGGTGCCGGACATGGACCACTACCAGCAGTTCCTGCTCGGTACCCTGACACGT
ATCGAAGGCGTCTCCAGCGTGCGTTCCAGCTTTGTCCTGCGTCAGGTGGCATCGAGCACCGAGCTGCCACTGGAGCATTT
GCGCAGCTGA

Upstream 100 bases:

>100_bases
GGTAAGACTTTCGGTGACCGCGGCGGGGATCGCGTGCCGTGGTCGTTCTGCCGGGGGCTGAAGTTGAGATAAAGCTTACG
CCGCCCCGACCGGCACCGGA

Downstream 100 bases:

>100_bases
GACGCAGCGCACAGGCTGTACCCTACTTTCCGAAGGGTTACTGCCTATAATCCGCGCCCTTGTATCCGGTGTCGCCAGGC
GCGCCGGACAGCCGAATGCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRRLLINAPLAQSTALDSSSRAIRSQRHPSMSKLDRYDLRILAELQHDARISNQELAERIGLSPSPCSRRVKQLEDDGYI
ARQVALLDRKKLGLTLTAYVLIGMDRHTPERFEHFEGVIGRCPEVLECSLVTGMDADYQLKVVVPDMDHYQQFLLGTLTR
IEGVSSVRSSFVLRQVASSTELPLEHLRS

Sequences:

>Translated_189_residues
MRRLLINAPLAQSTALDSSSRAIRSQRHPSMSKLDRYDLRILAELQHDARISNQELAERIGLSPSPCSRRVKQLEDDGYI
ARQVALLDRKKLGLTLTAYVLIGMDRHTPERFEHFEGVIGRCPEVLECSLVTGMDADYQLKVVVPDMDHYQQFLLGTLTR
IEGVSSVRSSFVLRQVASSTELPLEHLRS
>Mature_189_residues
MRRLLINAPLAQSTALDSSSRAIRSQRHPSMSKLDRYDLRILAELQHDARISNQELAERIGLSPSPCSRRVKQLEDDGYI
ARQVALLDRKKLGLTLTAYVLIGMDRHTPERFEHFEGVIGRCPEVLECSLVTGMDADYQLKVVVPDMDHYQQFLLGTLTR
IEGVSSVRSSFVLRQVASSTELPLEHLRS

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=160, Percent_Identity=43.75, Blast_Score=128, Evalue=2e-31,
Organism=Escherichia coli, GI87081742, Length=152, Percent_Identity=42.7631578947368, Blast_Score=124, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 21385; Mature: 21385

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLINAPLAQSTALDSSSRAIRSQRHPSMSKLDRYDLRILAELQHDARISNQELAERI
CCCEEECCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GLSPSPCSRRVKQLEDDGYIARQVALLDRKKLGLTLTAYVLIGMDRHTPERFEHFEGVIG
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
RCPEVLECSLVTGMDADYQLKVVVPDMDHYQQFLLGTLTRIEGVSSVRSSFVLRQVASST
CCHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ELPLEHLRS
CCCHHHHCC
>Mature Secondary Structure
MRRLLINAPLAQSTALDSSSRAIRSQRHPSMSKLDRYDLRILAELQHDARISNQELAERI
CCCEEECCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GLSPSPCSRRVKQLEDDGYIARQVALLDRKKLGLTLTAYVLIGMDRHTPERFEHFEGVIG
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
RCPEVLECSLVTGMDADYQLKVVVPDMDHYQQFLLGTLTRIEGVSSVRSSFVLRQVASST
CCHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ELPLEHLRS
CCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]