| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is rhbF [H]
Identifier: 146284014
GI number: 146284014
Start: 4003027
End: 4004811
Strand: Direct
Name: rhbF [H]
Synonym: PST_3702
Alternate gene names: 146284014
Gene position: 4003027-4004811 (Clockwise)
Preceding gene: 146284013
Following gene: 146284015
Centisome position: 87.64
GC content: 65.88
Gene sequence:
>1785_bases ATGAATCAGCTCGTACGCCTGCCGACCGCTACCAGCGACCTGGCCACCGACCATCTGCAAGCCGAACGCTGGGCCCGCGC CAATCGCCTGCTGCTGAAAAAGGCGCTGGCCGAGTTCAGCCACGAGAAGCTGCTCAGCCCCGAGCCGCTGGGCGACAGCC ACTACCGCGTCGCCGTGCCGGACAGCTCGACCGAGTACCGTTTCAAGGCGCGGCGGCTGGCGCTGGATCACTGGTCGATC GCCACCGACTCCATCGAAAAGCTCAGCGACGGGGAACCACAGCCGCTGGATGCCCTTGCGTTCATCATCGAATTCAGCGA CGTCCTCGGCCTTTCCGAAGCCAACCTGCCGCTCTACCTGGACGAGATCAGCAGCACCCTGTTCGGCAGCGCCTACAAAC TCGCCAACAGCCCGCTGAGCGCGGCCCAGCTGGCCCTGTCGGACTTCCAGCAGATCGAGTCCGGCATGCGCGAAGGTCAT CCGGGATTCGTCGCCAACAACGGGCGGATGGGGTTCGACGCCCAGGATTACCGCGCCTACGCGCCGGAAGCCGCCAGCCC GGTGCGTCTGGTCTGGCTCGCCGTGCATCGCAGCCGCGCCAGCTACAGCGCCATCGACGGGCTCGACCAGGCGACCCTGC TGCGCGAGGAACTGGGTGGTCAGCTCGACGTGTTCCACGACCAGCTGCAGGCGCTGCAGCTCGACCCGGACGACTATCTG CTGATGCCGGCGCATCCCTGGCAGTGGCACAACATCCTGGCCATCGGTTTCGCCGCGGAGATCGCCAACCGGCAGATCGT CTATCTCGGCCTGAGCAACGATCGTTACCTGGCGCAGCAGTCGATCCGCACCTTTTTCAACCAGAGCGAGCCGCAGCGGC GCTACGTGAAGACCGCCCTGTCGATCCTCAACATGGGCTTCATGCGCGGGCTGTCGCCCTATTACATGCAGGCGACTCCG GCGATCAACGCCTACCTCGCCGGCCGCGTGGCGCGCGACCCGCTGCTGCGCGAGGTGGCGGCGATCGGCTATCGCAACCC TTACTACGAGCAGGCGCTGCCGGCCAGCAGCCCCTACCGCAAGATGCTCTCGGCGCTCTGGCGCGAGAGCCCGCTGGGCC ACATCGAGCCCGGCCAGCGGCTGATGACCATGGCCGCGCTGCTGCACAGCGACGGCGACGAGCGCGCCCTGCTGCCGACG CTGATCAGTGCCTCGGGCCTGACCGCCGACCGCTGGCTGCGCCATTACCTCAATGCCTACCTGAGGCCGCTGCTGCACTG CTTTTATGCCCACGACCTGGTGTTCATGCCGCATGGCGAGAACCTGATCCTGGTGCTGGAAGACCATGTACCGGTGCGCG TGCTGATGAAGGACATCGGTGAGGAAGCGGTGATTCTCGATGCCGACGCGCAGATCCCCGAGGCCGTAGGCCGTCTCGCG GTATCGGTGCCTGACGAGCTCAAGGTGCTGTCGATCTTCACCGACGTGTTCGACGGCTTCTTCCGCTACCTCAGTCAGAT TCTCGATGAGCAGGTCGGCCTGCCGGAGCAGCGTTTCTGGCAACAGGTCGCCGACTGCATCGCAGACTATCAGGCCAGCC AGCCGCAGCTGCGCGACAAGTTCGCCCGCTACGACCTGTTCGCCGAGGAATTCGCCCGCTCCTGCCTGAACCGCCTGCAA CTGGGCAACAACCGGCAGATGCTCGACCTCGCCGATCCGGCCGGAGCGCTGAAATTCGCGGGCACCCTGAAGAACCCCGT GGCGCGCTATGCACCGGAGCGCTGA
Upstream 100 bases:
>100_bases GCTTCGTCTACCAGTGCCTGCTGCATCTGCCGGAGAAGGACGCCTGCCTGGCGTTCTGCACCCGTGCGCAGTTCCTCGCC ACCCTTCAGGAGAACCCGCA
Downstream 100 bases:
>100_bases AGCGCGCTGGCCGGACACGGATGCGCTGGGCAGCCTGCTGCTGCGCCTGCGTCGCGTGCTGCCGGGCCTCGATGGCCGGG TCGGCGCACCCCGCGCCGAC
Product: siderophore biosynthesis protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 594; Mature: 594
Protein sequence:
>594_residues MNQLVRLPTATSDLATDHLQAERWARANRLLLKKALAEFSHEKLLSPEPLGDSHYRVAVPDSSTEYRFKARRLALDHWSI ATDSIEKLSDGEPQPLDALAFIIEFSDVLGLSEANLPLYLDEISSTLFGSAYKLANSPLSAAQLALSDFQQIESGMREGH PGFVANNGRMGFDAQDYRAYAPEAASPVRLVWLAVHRSRASYSAIDGLDQATLLREELGGQLDVFHDQLQALQLDPDDYL LMPAHPWQWHNILAIGFAAEIANRQIVYLGLSNDRYLAQQSIRTFFNQSEPQRRYVKTALSILNMGFMRGLSPYYMQATP AINAYLAGRVARDPLLREVAAIGYRNPYYEQALPASSPYRKMLSALWRESPLGHIEPGQRLMTMAALLHSDGDERALLPT LISASGLTADRWLRHYLNAYLRPLLHCFYAHDLVFMPHGENLILVLEDHVPVRVLMKDIGEEAVILDADAQIPEAVGRLA VSVPDELKVLSIFTDVFDGFFRYLSQILDEQVGLPEQRFWQQVADCIADYQASQPQLRDKFARYDLFAEEFARSCLNRLQ LGNNRQMLDLADPAGALKFAGTLKNPVARYAPER
Sequences:
>Translated_594_residues MNQLVRLPTATSDLATDHLQAERWARANRLLLKKALAEFSHEKLLSPEPLGDSHYRVAVPDSSTEYRFKARRLALDHWSI ATDSIEKLSDGEPQPLDALAFIIEFSDVLGLSEANLPLYLDEISSTLFGSAYKLANSPLSAAQLALSDFQQIESGMREGH PGFVANNGRMGFDAQDYRAYAPEAASPVRLVWLAVHRSRASYSAIDGLDQATLLREELGGQLDVFHDQLQALQLDPDDYL LMPAHPWQWHNILAIGFAAEIANRQIVYLGLSNDRYLAQQSIRTFFNQSEPQRRYVKTALSILNMGFMRGLSPYYMQATP AINAYLAGRVARDPLLREVAAIGYRNPYYEQALPASSPYRKMLSALWRESPLGHIEPGQRLMTMAALLHSDGDERALLPT LISASGLTADRWLRHYLNAYLRPLLHCFYAHDLVFMPHGENLILVLEDHVPVRVLMKDIGEEAVILDADAQIPEAVGRLA VSVPDELKVLSIFTDVFDGFFRYLSQILDEQVGLPEQRFWQQVADCIADYQASQPQLRDKFARYDLFAEEFARSCLNRLQ LGNNRQMLDLADPAGALKFAGTLKNPVARYAPER >Mature_594_residues MNQLVRLPTATSDLATDHLQAERWARANRLLLKKALAEFSHEKLLSPEPLGDSHYRVAVPDSSTEYRFKARRLALDHWSI ATDSIEKLSDGEPQPLDALAFIIEFSDVLGLSEANLPLYLDEISSTLFGSAYKLANSPLSAAQLALSDFQQIESGMREGH PGFVANNGRMGFDAQDYRAYAPEAASPVRLVWLAVHRSRASYSAIDGLDQATLLREELGGQLDVFHDQLQALQLDPDDYL LMPAHPWQWHNILAIGFAAEIANRQIVYLGLSNDRYLAQQSIRTFFNQSEPQRRYVKTALSILNMGFMRGLSPYYMQATP AINAYLAGRVARDPLLREVAAIGYRNPYYEQALPASSPYRKMLSALWRESPLGHIEPGQRLMTMAALLHSDGDERALLPT LISASGLTADRWLRHYLNAYLRPLLHCFYAHDLVFMPHGENLILVLEDHVPVRVLMKDIGEEAVILDADAQIPEAVGRLA VSVPDELKVLSIFTDVFDGFFRYLSQILDEQVGLPEQRFWQQVADCIADYQASQPQLRDKFARYDLFAEEFARSCLNRLQ LGNNRQMLDLADPAGALKFAGTLKNPVARYAPER
Specific function: Unknown
COG id: COG4264
COG function: function code Q; Siderophore synthetase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007310 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]
EC number: NA
Molecular weight: Translated: 66828; Mature: 66828
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQLVRLPTATSDLATDHLQAERWARANRLLLKKALAEFSHEKLLSPEPLGDSHYRVAVP CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC DSSTEYRFKARRLALDHWSIATDSIEKLSDGEPQPLDALAFIIEFSDVLGLSEANLPLYL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEH DEISSTLFGSAYKLANSPLSAAQLALSDFQQIESGMREGHPGFVANNGRMGFDAQDYRAY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHC APEAASPVRLVWLAVHRSRASYSAIDGLDQATLLREELGGQLDVFHDQLQALQLDPDDYL CCCCCCCCEEHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEE LMPAHPWQWHNILAIGFAAEIANRQIVYLGLSNDRYLAQQSIRTFFNQSEPQRRYVKTAL EECCCCCCCCCEEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHH SILNMGFMRGLSPYYMQATPAINAYLAGRVARDPLLREVAAIGYRNPYYEQALPASSPYR HHHHHHHHHCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHH KMLSALWRESPLGHIEPGQRLMTMAALLHSDGDERALLPTLISASGLTADRWLRHYLNAY HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHH LRPLLHCFYAHDLVFMPHGENLILVLEDHVPVRVLMKDIGEEAVILDADAQIPEAVGRLA HHHHHHHHHHHCEEEEECCCCEEEEEECCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHE VSVPDELKVLSIFTDVFDGFFRYLSQILDEQVGLPEQRFWQQVADCIADYQASQPQLRDK ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHH FARYDLFAEEFARSCLNRLQLGNNRQMLDLADPAGALKFAGTLKNPVARYAPER HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCHHHCCCCC >Mature Secondary Structure MNQLVRLPTATSDLATDHLQAERWARANRLLLKKALAEFSHEKLLSPEPLGDSHYRVAVP CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC DSSTEYRFKARRLALDHWSIATDSIEKLSDGEPQPLDALAFIIEFSDVLGLSEANLPLYL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEH DEISSTLFGSAYKLANSPLSAAQLALSDFQQIESGMREGHPGFVANNGRMGFDAQDYRAY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHC APEAASPVRLVWLAVHRSRASYSAIDGLDQATLLREELGGQLDVFHDQLQALQLDPDDYL CCCCCCCCEEHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEE LMPAHPWQWHNILAIGFAAEIANRQIVYLGLSNDRYLAQQSIRTFFNQSEPQRRYVKTAL EECCCCCCCCCEEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHH SILNMGFMRGLSPYYMQATPAINAYLAGRVARDPLLREVAAIGYRNPYYEQALPASSPYR HHHHHHHHHCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHH KMLSALWRESPLGHIEPGQRLMTMAALLHSDGDERALLPTLISASGLTADRWLRHYLNAY HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHH LRPLLHCFYAHDLVFMPHGENLILVLEDHVPVRVLMKDIGEEAVILDADAQIPEAVGRLA HHHHHHHHHHHCEEEEECCCCEEEEEECCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHE VSVPDELKVLSIFTDVFDGFFRYLSQILDEQVGLPEQRFWQQVADCIADYQASQPQLRDK ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHH FARYDLFAEEFARSCLNRLQLGNNRQMLDLADPAGALKFAGTLKNPVARYAPER HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11274118; 11481432 [H]