| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is yceE [C]
Identifier: 146284012
GI number: 146284012
Start: 4001319
End: 4002446
Strand: Direct
Name: yceE [C]
Synonym: PST_3700
Alternate gene names: 146284012
Gene position: 4001319-4002446 (Clockwise)
Preceding gene: 146284011
Following gene: 146284013
Centisome position: 87.61
GC content: 67.64
Gene sequence:
>1128_bases ATGACGCTGCTGGCCGTGCTCGGCGACAGCCTGCTGATGCCGTTCTACCCGCAATACTTCGCCGAGCGTTTCGGCGAGTT GCGCAGCGAGCAGGTCGGGCTGTACCTGGCCGCGGTGTGCCTGGTGGCGATGCTCGCACTGCCCGTGTGGGTGCGCCTTG CACGCCATGCTCACCCGCTGCGGCTGCTGATCCTCGGTCAGCTGCTAGCCGGCGTGCTGGCACTGGCCTGCGCGGCCATC GACCGGCAGTGGCTGTTCTGGCCGGTGTCGCTGGCGATGATCGCCTTCAAGGCCAGCTATCTGCTGATGTATCCCTACGT CATGGGCCTGGTAGGCACCGACCAGCAGGTACGCACCATCGGCCTGCTTTCGGTGGTGGTGCACCTGGGCGCAATCGCCG GCGCGACGCTGGGCGGCGGCGTGCTGCACTACCTCAGTCCGGCGCGGATGTTCGTGCTGATGGGGCTGATGGACTTCGTG CAGATGGCCGTCAGCCTGCTCTTGTTGCGCCATGCGCCGCAGCCGGCACGGGTCGATGCGAGCACGCCACCGAGGCCGCG GGAGGAGCATCTGGCCATTGCCCGGCTGTGCCTGCTGATGCTGGCCTTCTACTTCTGCGTCTACCTGGCGCGGCCGTTCT TCACGCTGTACTGGGAACAGCTCCGCGGACCACAGGCCAGCTGGATCACCGGCCTGGTCTATGCCATTCCCGGCATGCTG GCACTGCTCGCCCTCGCCCTGCACTACCACGCCGGGCAGCACCTGACCGCCTGGCTGCTGCTCGGTGCCGCCGGGCTGGC GTTGCAGGGCGTCGAGCAGATGCCGCTGGTGCTGGCCGGGCGCGTGCTGTTCGGCTGGGCGCTGTATCAGCTCACCGTGG CACTGGATGCGCGACTGTTCGCCCTCAGCCGGCCGGAGCACTACGGCCGCGACTACAGCCTGATCAACATCTTCCAGAAC CTCGGCGTGCTCGCCGCCTCCTGGCTGGCCGGGCTGGTGGTGCGTGATGCCGGCCTCGCCGCGCCGTTCTTCCTGTCCGC CCTCGGCCTCGTTCTCACCGCCTACGTACTGCGCTGGCTGCTGGTTTCAGCACCAGTCAGCGCGTCTCTCTGTGGAGCCA AATCATGA
Upstream 100 bases:
>100_bases TGGAGACGAAGATCGCCTTCCAGCAGTTCAGCCTGCCGCAGCCGCTCACGCCCCAGGGCGCGGTGGCGGCGCGATGACGC TGCGACGCGCACTGATCGGC
Downstream 100 bases:
>100_bases ATACCGCTCTTTCCCGCGCGGATGGTCCGCGCTTCGTTCGCTACTGCAGGCTCGGCGCCATGCATTTCGAGACCGTGCAG GCCGAGCACCTGCCGCTGCT
Product: hypothetical protein
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MTLLAVLGDSLLMPFYPQYFAERFGELRSEQVGLYLAAVCLVAMLALPVWVRLARHAHPLRLLILGQLLAGVLALACAAI DRQWLFWPVSLAMIAFKASYLLMYPYVMGLVGTDQQVRTIGLLSVVVHLGAIAGATLGGGVLHYLSPARMFVLMGLMDFV QMAVSLLLLRHAPQPARVDASTPPRPREEHLAIARLCLLMLAFYFCVYLARPFFTLYWEQLRGPQASWITGLVYAIPGML ALLALALHYHAGQHLTAWLLLGAAGLALQGVEQMPLVLAGRVLFGWALYQLTVALDARLFALSRPEHYGRDYSLINIFQN LGVLAASWLAGLVVRDAGLAAPFFLSALGLVLTAYVLRWLLVSAPVSASLCGAKS
Sequences:
>Translated_375_residues MTLLAVLGDSLLMPFYPQYFAERFGELRSEQVGLYLAAVCLVAMLALPVWVRLARHAHPLRLLILGQLLAGVLALACAAI DRQWLFWPVSLAMIAFKASYLLMYPYVMGLVGTDQQVRTIGLLSVVVHLGAIAGATLGGGVLHYLSPARMFVLMGLMDFV QMAVSLLLLRHAPQPARVDASTPPRPREEHLAIARLCLLMLAFYFCVYLARPFFTLYWEQLRGPQASWITGLVYAIPGML ALLALALHYHAGQHLTAWLLLGAAGLALQGVEQMPLVLAGRVLFGWALYQLTVALDARLFALSRPEHYGRDYSLINIFQN LGVLAASWLAGLVVRDAGLAAPFFLSALGLVLTAYVLRWLLVSAPVSASLCGAKS >Mature_374_residues TLLAVLGDSLLMPFYPQYFAERFGELRSEQVGLYLAAVCLVAMLALPVWVRLARHAHPLRLLILGQLLAGVLALACAAID RQWLFWPVSLAMIAFKASYLLMYPYVMGLVGTDQQVRTIGLLSVVVHLGAIAGATLGGGVLHYLSPARMFVLMGLMDFVQ MAVSLLLLRHAPQPARVDASTPPRPREEHLAIARLCLLMLAFYFCVYLARPFFTLYWEQLRGPQASWITGLVYAIPGMLA LLALALHYHAGQHLTAWLLLGAAGLALQGVEQMPLVLAGRVLFGWALYQLTVALDARLFALSRPEHYGRDYSLINIFQNL GVLAASWLAGLVVRDAGLAAPFFLSALGLVLTAYVLRWLLVSAPVSASLCGAKS
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40966; Mature: 40834
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLAVLGDSLLMPFYPQYFAERFGELRSEQVGLYLAAVCLVAMLALPVWVRLARHAHPL CCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RLLILGQLLAGVLALACAAIDRQWLFWPVSLAMIAFKASYLLMYPYVMGLVGTDQQVRTI HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH GLLSVVVHLGAIAGATLGGGVLHYLSPARMFVLMGLMDFVQMAVSLLLLRHAPQPARVDA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC STPPRPREEHLAIARLCLLMLAFYFCVYLARPFFTLYWEQLRGPQASWITGLVYAIPGML CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALLALALHYHAGQHLTAWLLLGAAGLALQGVEQMPLVLAGRVLFGWALYQLTVALDARLF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSRPEHYGRDYSLINIFQNLGVLAASWLAGLVVRDAGLAAPFFLSALGLVLTAYVLRWL HHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LVSAPVSASLCGAKS HHHCCCHHHHCCCCC >Mature Secondary Structure TLLAVLGDSLLMPFYPQYFAERFGELRSEQVGLYLAAVCLVAMLALPVWVRLARHAHPL CHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RLLILGQLLAGVLALACAAIDRQWLFWPVSLAMIAFKASYLLMYPYVMGLVGTDQQVRTI HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH GLLSVVVHLGAIAGATLGGGVLHYLSPARMFVLMGLMDFVQMAVSLLLLRHAPQPARVDA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC STPPRPREEHLAIARLCLLMLAFYFCVYLARPFFTLYWEQLRGPQASWITGLVYAIPGML CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALLALALHYHAGQHLTAWLLLGAAGLALQGVEQMPLVLAGRVLFGWALYQLTVALDARLF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSRPEHYGRDYSLINIFQNLGVLAASWLAGLVVRDAGLAAPFFLSALGLVLTAYVLRWL HHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LVSAPVSASLCGAKS HHHCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA