| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
Click here to switch to the map view.
The map label for this gene is ssuA [C]
Identifier: 146284001
GI number: 146284001
Start: 3987740
End: 3988675
Strand: Direct
Name: ssuA [C]
Synonym: PST_3689
Alternate gene names: 146284001
Gene position: 3987740-3988675 (Clockwise)
Preceding gene: 146284000
Following gene: 146284002
Centisome position: 87.31
GC content: 66.56
Gene sequence:
>936_bases ATGGTTCGGGGCTCAATCCTCTTGCTGTTGTTTGTCGCCTTGCTCGGCTGCCAGCCCGAATCGGATTCGATCCGTATCGG CAGCAACCGCTGGCTTGGCTATGCGCCGATCTATCTGGCGGACGATCTGGGCTGGTCTGCCCCCAGCGGCATCCGCCTGG TGGAATACCCGAACACCACAGGTGTGCTGCGCGGCTTTCGCAACGGCATGCTGGACGCCGCCATGCTCACCCTCGACGAA ACGCTGCTGCTGCAGGACAGCGCGGCGGAGCTCGACCTGGAGATCATTCTGGTCACCAACGTCTCAGCTGGCGCCGATGC GCTGTTCGCCCGCGCGCCGCTGACCAACCTCAAGGACCTGGCCGGCCAGCGCATCGGCGTCGAAAACACTGCGCTGGGCG CCTACTTCCTTTCCCGCGTGCTGGATCAGGCCGGGCTGCGGATCGACGATCTGCAGGTGGTCAGCCTGCCGGTGCATGAG CAGGCCGCCGCCTTCGCCGCCGGCGAAGTCGACGCTGTCATCACCTTCGCTTCGGAGGGCCCGGCGCTGGAAAGCAAGGG CGCCCGGCGCATCTTCGACAGCCGCCAGCTGCCGGGCGAGATCGTCGACGTACTGGTGGTCGACCGGCAACGCGTCACCC GCGAGCAGCGTCGGCGCCTCCGGGCCCTCTGGTTCGATGCGCTGCGCACCTGGCAGGACAATCGCGGCGAAACCGATCCG CGCCTGCATGCGCGCCTGGGCCTGACGCCGATGGCACTGCAGGTCACCCTCGACGGCCTGTTGATGGGTGATCGCGCCGT CAACCGTGAGTGGTTCGACGAGGGCCAGTTGCAGCAGAGCATCGGCCAGCTCAGCCAGTATCTGCGCGAACGCCGGCTGC TCAACGGTTCGAACCCAGCCAATCTGATCGCTCGCTGCGAGGGCCCGATATGCTGA
Upstream 100 bases:
>100_bases GCACCGCCGATACGTCGCGCCTATATCCCCTGCTTTCGAAGGGATTCCCGTGACCGTACGGTTTCGCTATGGTGGCTAAC AGGTATCACGGAGTGATCGC
Downstream 100 bases:
>100_bases CAAGGTTGTCGCTGCGTCGATCAATGCCCCTGCTGCTGGGCATCTTCGGTCTGCTGTTCACGGTCATGCTGACCGCCTGG CACCTGCCGACCCGTATCGA
Product: ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
Products: NA
Alternate protein names: NlpA Lipoprotein; NMT1/THI5 Like Domain Protein; ABC-Type Nitrate/Sulfonate/Bicarbonate Transporter Protein; NMT1/THI5 Like Family; NMT1/THI5-Like Domain-Containing Protein; NLPA Lipoprotein; Nmt1/Thi5 Like Domain Protein; Lipoprotein
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MVRGSILLLLFVALLGCQPESDSIRIGSNRWLGYAPIYLADDLGWSAPSGIRLVEYPNTTGVLRGFRNGMLDAAMLTLDE TLLLQDSAAELDLEIILVTNVSAGADALFARAPLTNLKDLAGQRIGVENTALGAYFLSRVLDQAGLRIDDLQVVSLPVHE QAAAFAAGEVDAVITFASEGPALESKGARRIFDSRQLPGEIVDVLVVDRQRVTREQRRRLRALWFDALRTWQDNRGETDP RLHARLGLTPMALQVTLDGLLMGDRAVNREWFDEGQLQQSIGQLSQYLRERRLLNGSNPANLIARCEGPIC
Sequences:
>Translated_311_residues MVRGSILLLLFVALLGCQPESDSIRIGSNRWLGYAPIYLADDLGWSAPSGIRLVEYPNTTGVLRGFRNGMLDAAMLTLDE TLLLQDSAAELDLEIILVTNVSAGADALFARAPLTNLKDLAGQRIGVENTALGAYFLSRVLDQAGLRIDDLQVVSLPVHE QAAAFAAGEVDAVITFASEGPALESKGARRIFDSRQLPGEIVDVLVVDRQRVTREQRRRLRALWFDALRTWQDNRGETDP RLHARLGLTPMALQVTLDGLLMGDRAVNREWFDEGQLQQSIGQLSQYLRERRLLNGSNPANLIARCEGPIC >Mature_311_residues MVRGSILLLLFVALLGCQPESDSIRIGSNRWLGYAPIYLADDLGWSAPSGIRLVEYPNTTGVLRGFRNGMLDAAMLTLDE TLLLQDSAAELDLEIILVTNVSAGADALFARAPLTNLKDLAGQRIGVENTALGAYFLSRVLDQAGLRIDDLQVVSLPVHE QAAAFAAGEVDAVITFASEGPALESKGARRIFDSRQLPGEIVDVLVVDRQRVTREQRRRLRALWFDALRTWQDNRGETDP RLHARLGLTPMALQVTLDGLLMGDRAVNREWFDEGQLQQSIGQLSQYLRERRLLNGSNPANLIARCEGPIC
Specific function: Part Of A Binding-Protein-Dependent Transport System For Aliphatic Sulfonates. Putative Binding Protein. [C]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34231; Mature: 34231
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRGSILLLLFVALLGCQPESDSIRIGSNRWLGYAPIYLADDLGWSAPSGIRLVEYPNTT CCCHHHHHHHHHHHHCCCCCCCCEEECCCCCEEECCEEEECCCCCCCCCCCEEEECCCCH GVLRGFRNGMLDAAMLTLDETLLLQDSAAELDLEIILVTNVSAGADALFARAPLTNLKDL HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEECCCCCHHHHHHCCCCHHHHH AGQRIGVENTALGAYFLSRVLDQAGLRIDDLQVVSLPVHEQAAAFAAGEVDAVITFASEG CCCCCCCCHHHHHHHHHHHHHHHHCCEECCEEEEEECCHHHHHHHHCCCCEEEEEECCCC PALESKGARRIFDSRQLPGEIVDVLVVDRQRVTREQRRRLRALWFDALRTWQDNRGETDP CCCCCCCCHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RLHARLGLTPMALQVTLDGLLMGDRAVNREWFDEGQLQQSIGQLSQYLRERRLLNGSNPA HHHHCCCCCCEEEEEEECHHEECCHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHH NLIARCEGPIC HEEEECCCCCC >Mature Secondary Structure MVRGSILLLLFVALLGCQPESDSIRIGSNRWLGYAPIYLADDLGWSAPSGIRLVEYPNTT CCCHHHHHHHHHHHHCCCCCCCCEEECCCCCEEECCEEEECCCCCCCCCCCEEEECCCCH GVLRGFRNGMLDAAMLTLDETLLLQDSAAELDLEIILVTNVSAGADALFARAPLTNLKDL HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEECCCCCHHHHHHCCCCHHHHH AGQRIGVENTALGAYFLSRVLDQAGLRIDDLQVVSLPVHEQAAAFAAGEVDAVITFASEG CCCCCCCCHHHHHHHHHHHHHHHHCCEECCEEEEEECCHHHHHHHHCCCCEEEEEECCCC PALESKGARRIFDSRQLPGEIVDVLVVDRQRVTREQRRRLRALWFDALRTWQDNRGETDP CCCCCCCCHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RLHARLGLTPMALQVTLDGLLMGDRAVNREWFDEGQLQQSIGQLSQYLRERRLLNGSNPA HHHHCCCCCCEEEEEEECHHEECCHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHH NLIARCEGPIC HEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA