| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is yhdG [H]
Identifier: 146283992
GI number: 146283992
Start: 3977872
End: 3979320
Strand: Direct
Name: yhdG [H]
Synonym: PST_3680
Alternate gene names: 146283992
Gene position: 3977872-3979320 (Clockwise)
Preceding gene: 146283991
Following gene: 146283993
Centisome position: 87.09
GC content: 65.22
Gene sequence:
>1449_bases ATGGCTCTCGAACACAGCAGTTCAACGCCACCGCACCACGCAATCGATTTCGAAACCGTTGGCAGTAGCTATTTCCAGGA ACGCGAACTGAAGAAAGGCGCCGCCGGCTGGGTGCTGCTGGTCGGCCTTGGCGTCGCCTACGTGATTTCCGGCGACTACG CCGGCTGGAACTTCGGCCTCGCCCAGGGCGGCTGGGGCGGGCTGTTCATCGCCACGCTGCTGATGGCGACCATGTACCTG TGCATGTGCTTCTCGCTGGCCGAGCTGTCGTCGATGGTCCCGACCGCGGGCGGCGGCTATGGTTTTGCCCGCACCGCCTT CGGCCCATTGGGCGGCTTTCTCACCGGCACGGCGATCCTCATCGAATACGCCATCGCGCCGGCGGCGATCGCCGTGTTCA TCGGCGCCTATTGCGAGTCACTGTTCGGCATCGGCGGCTGGATGATCTATCTGGCCTTCTACATCGTCTTCATCGGCATC CATATCTTCGGCGTCGGCGAGGCGCTGAAGCTGATGTTCATCATCACCGCGGTCGCCGCCCTTGCCCTGGCGGTGTTCAT CGTCGCCATGGTGCCGCACTTCTCGGTGGACAAGCTGCTCGATATCGCGCCGACCACCGCTGCCGGTGCCAGCAACTTCC TGCCCTACGGCTACGTCGGCATCTGGGCGGCGATTCCCTACGCGATCTGGTTCTTCCTCGCCGTCGAAGGCGTGCCGCTG GCCGCCGAGGAAACCAAGAACCCGCAGCGCGACATGCCCCGCGGGCTGATCGGCGCCATGCTGATACTGGTCGCCTTTGC CGGCCTGATCTTGCTGGTCGGCCCGGGCGGCGCCGGTTCCAGCACCCTGGTGGCATCCGGCAACCCGCTGGTGGAAGCGC TGACCACGGCCTACGGCTCGTCCACCTGGATGAGCGGCTTCGTCAACCTGGTTGGCCTGGCCGGGCTGATCGCCAGCTTC TTCTCGATCATCTTCGCCTACTCGCGGCAGATCTTTGCCCTGTCGCGGGCCGGCTACCTGCCGCGCAACCTCTCGCTGAC CAACAAGAACAAGGCGCCGGTGCTGGCCCTGGTGATCCCCGGTGTGATCGGCTTCCTGCTCTCGCTGACCGGCCAGGGCG ACCTGCTGATCCTCGTCGCGGTGTTCGGCGCGACCATCTCCTACGTGTTGATGATGGCTTCGCACATCGTGCTGCGCCTG CGCCGGCCGGATCTGCATCGCCCGTACAGGACACCTGGCGGCATCGTCACCTCGGGCGTGGCGCTGGTACTGGCCTGCAT CGCGGTCATCGCGGGCTTCCTGGTCGACCCGCGGGTGGTGATCGGCGCCGCGATCATCTACGGGATCTTCATCGCCTATT TCGCGATCTACAGTCGACACCATCTGGTGGCCGGCACGCCGGAAGGGGAATTCGCGGCGATCGAGCAGGCCGAGGCGACA CTCAAGTAG
Upstream 100 bases:
>100_bases GCCGACATCCACCGACAAAACACCGGGAATCCCGTATTCCGTGCCGGGGCATGACGCTTGCTAGGGAGAGAGGTGCCAAC CCGTCCAAGAGGATTCCCCC
Downstream 100 bases:
>100_bases GGAGAGCAGCCATGACGTACTCGCACAGCGTGGGCGGCACCACCTGGCGCTTCGACGATCTGCGCGAGGTGATGGCCAAG GCCAGCCCGGCGCGATCCGG
Product: ethanolamine transporter
Products: D-glycine [Cytoplasm]; D-alanine [Cytoplasm]; Proton [Cytoplasm]; D-serine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MALEHSSSTPPHHAIDFETVGSSYFQERELKKGAAGWVLLVGLGVAYVISGDYAGWNFGLAQGGWGGLFIATLLMATMYL CMCFSLAELSSMVPTAGGGYGFARTAFGPLGGFLTGTAILIEYAIAPAAIAVFIGAYCESLFGIGGWMIYLAFYIVFIGI HIFGVGEALKLMFIITAVAALALAVFIVAMVPHFSVDKLLDIAPTTAAGASNFLPYGYVGIWAAIPYAIWFFLAVEGVPL AAEETKNPQRDMPRGLIGAMLILVAFAGLILLVGPGGAGSSTLVASGNPLVEALTTAYGSSTWMSGFVNLVGLAGLIASF FSIIFAYSRQIFALSRAGYLPRNLSLTNKNKAPVLALVIPGVIGFLLSLTGQGDLLILVAVFGATISYVLMMASHIVLRL RRPDLHRPYRTPGGIVTSGVALVLACIAVIAGFLVDPRVVIGAAIIYGIFIAYFAIYSRHHLVAGTPEGEFAAIEQAEAT LK
Sequences:
>Translated_482_residues MALEHSSSTPPHHAIDFETVGSSYFQERELKKGAAGWVLLVGLGVAYVISGDYAGWNFGLAQGGWGGLFIATLLMATMYL CMCFSLAELSSMVPTAGGGYGFARTAFGPLGGFLTGTAILIEYAIAPAAIAVFIGAYCESLFGIGGWMIYLAFYIVFIGI HIFGVGEALKLMFIITAVAALALAVFIVAMVPHFSVDKLLDIAPTTAAGASNFLPYGYVGIWAAIPYAIWFFLAVEGVPL AAEETKNPQRDMPRGLIGAMLILVAFAGLILLVGPGGAGSSTLVASGNPLVEALTTAYGSSTWMSGFVNLVGLAGLIASF FSIIFAYSRQIFALSRAGYLPRNLSLTNKNKAPVLALVIPGVIGFLLSLTGQGDLLILVAVFGATISYVLMMASHIVLRL RRPDLHRPYRTPGGIVTSGVALVLACIAVIAGFLVDPRVVIGAAIIYGIFIAYFAIYSRHHLVAGTPEGEFAAIEQAEAT LK >Mature_481_residues ALEHSSSTPPHHAIDFETVGSSYFQERELKKGAAGWVLLVGLGVAYVISGDYAGWNFGLAQGGWGGLFIATLLMATMYLC MCFSLAELSSMVPTAGGGYGFARTAFGPLGGFLTGTAILIEYAIAPAAIAVFIGAYCESLFGIGGWMIYLAFYIVFIGIH IFGVGEALKLMFIITAVAALALAVFIVAMVPHFSVDKLLDIAPTTAAGASNFLPYGYVGIWAAIPYAIWFFLAVEGVPLA AEETKNPQRDMPRGLIGAMLILVAFAGLILLVGPGGAGSSTLVASGNPLVEALTTAYGSSTWMSGFVNLVGLAGLIASFF SIIFAYSRQIFALSRAGYLPRNLSLTNKNKAPVLALVIPGVIGFLLSLTGQGDLLILVAVFGATISYVLMMASHIVLRLR RPDLHRPYRTPGGIVTSGVALVLACIAVIAGFLVDPRVVIGAAIIYGIFIAYFAIYSRHHLVAGTPEGEFAAIEQAEATL K
Specific function: Permease That Is Involved In The Transport Across The Cytoplasmic Membrane Of D-Alanine, D-Serine And Glycine. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI258645169, Length=405, Percent_Identity=24.9382716049383, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI258614005, Length=406, Percent_Identity=24.384236453202, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI258614003, Length=406, Percent_Identity=24.384236453202, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI7657683, Length=343, Percent_Identity=26.2390670553936, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI33286428, Length=398, Percent_Identity=25.1256281407035, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1790653, Length=359, Percent_Identity=23.9554317548747, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1786602, Length=398, Percent_Identity=23.1155778894472, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1786302, Length=391, Percent_Identity=24.2966751918159, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1787768, Length=222, Percent_Identity=27.9279279279279, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17532491, Length=357, Percent_Identity=24.6498599439776, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17531343, Length=357, Percent_Identity=24.9299719887955, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24667468, Length=359, Percent_Identity=25.3481894150418, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24668806, Length=363, Percent_Identity=22.3140495867769, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI21356285, Length=363, Percent_Identity=22.3140495867769, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI24668802, Length=363, Percent_Identity=22.3140495867769, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI161077963, Length=340, Percent_Identity=25.2941176470588, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI221512776, Length=381, Percent_Identity=24.1469816272966, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24666159, Length=381, Percent_Identity=24.1469816272966, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 - InterPro: IPR004758 - InterPro: IPR015606 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 50675; Mature: 50544
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEHSSSTPPHHAIDFETVGSSYFQERELKKGAAGWVLLVGLGVAYVISGDYAGWNFGL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCCCCC AQGGWGGLFIATLLMATMYLCMCFSLAELSSMVPTAGGGYGFARTAFGPLGGFLTGTAIL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH IEYAIAPAAIAVFIGAYCESLFGIGGWMIYLAFYIVFIGIHIFGVGEALKLMFIITAVAA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALAVFIVAMVPHFSVDKLLDIAPTTAAGASNFLPYGYVGIWAAIPYAIWFFLAVEGVPL HHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC AAEETKNPQRDMPRGLIGAMLILVAFAGLILLVGPGGAGSSTLVASGNPLVEALTTAYGS CHHHCCCCHHHCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCHHHHHHHHHHCC STWMSGFVNLVGLAGLIASFFSIIFAYSRQIFALSRAGYLPRNLSLTNKNKAPVLALVIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH GVIGFLLSLTGQGDLLILVAVFGATISYVLMMASHIVLRLRRPDLHRPYRTPGGIVTSGV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH ALVLACIAVIAGFLVDPRVVIGAAIIYGIFIAYFAIYSRHHLVAGTPEGEFAAIEQAEAT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHC LK CC >Mature Secondary Structure ALEHSSSTPPHHAIDFETVGSSYFQERELKKGAAGWVLLVGLGVAYVISGDYAGWNFGL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCCCCC AQGGWGGLFIATLLMATMYLCMCFSLAELSSMVPTAGGGYGFARTAFGPLGGFLTGTAIL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH IEYAIAPAAIAVFIGAYCESLFGIGGWMIYLAFYIVFIGIHIFGVGEALKLMFIITAVAA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALAVFIVAMVPHFSVDKLLDIAPTTAAGASNFLPYGYVGIWAAIPYAIWFFLAVEGVPL HHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC AAEETKNPQRDMPRGLIGAMLILVAFAGLILLVGPGGAGSSTLVASGNPLVEALTTAYGS CHHHCCCCHHHCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCHHHHHHHHHHCC STWMSGFVNLVGLAGLIASFFSIIFAYSRQIFALSRAGYLPRNLSLTNKNKAPVLALVIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH GVIGFLLSLTGQGDLLILVAVFGATISYVLMMASHIVLRLRRPDLHRPYRTPGGIVTSGV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH ALVLACIAVIAGFLVDPRVVIGAAIIYGIFIAYFAIYSRHHLVAGTPEGEFAAIEQAEAT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHC LK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-glycine [Periplasm]; D-alanine [Periplasm]; Proton [Periplasm]; D-serine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + D-glycine [Periplasm] = Proton [Cytoplasm] + D-glycine [Cytoplasm] Proton [Periplasm] + D-alanine [Periplasm] = Proton [Cytoplasm] + D-alanine [Cytoplasm] Proton [Periplasm] + D-serine [Periplasm] = Proton [Cytoplasm] + D-serine [Cyto
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]