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The map label for this gene is ydaV [C]

Identifier: 146283727

GI number: 146283727

Start: 3684782

End: 3685537

Strand: Direct

Name: ydaV [C]

Synonym: PST_3410

Alternate gene names: 146283727

Gene position: 3684782-3685537 (Clockwise)

Preceding gene: 146283726

Following gene: 146283728

Centisome position: 80.68

GC content: 65.08

Gene sequence:

>756_bases
ATGCTGCCTCACCCGACCCTGGACAAGCTCCAGTCCCTGCGCCTGCACGGCATGCTCAAGGCCCTCGCCGAGCAACTGAA
AATCCCCGACATCGGCAGCCTGAGCTTCGAGGAGCGCCTCGGCCTACTGGTCGACCGCGAGCTGACTGAGCGCGACGACA
AGCGTCTGAGCAGCCGCCTGCGTCAGGCCAGGTTACGCCACAACGCCTGCCTCGAAGACCTCGACTACCGCAGCCCACGC
GGCCTCGACAAGGCGCTGATCCTCCAGCTGAGCAGCGGTCAGTGGCTACGCGACGGCCTCAACCTGATCATCAACGGCCC
GACCGGCGTCGGTAAGACCTGGCTGGCCTGCGCCCTGGCCCACCAGGCCTGCCGAGATGGCTACAGCGTGCGTTACCTAC
GCTTGCCGCGCCTGTTGGAAGAGCTGGGCCTTGCCCACGGTGACGGACGCTTCGCCAAGCTGATGAGCAGCTACGCCAAG
ACCGACCTGCTGATCCTCGATGACTGGGGGCTGGCCCCGTTCACCGCCGAACAGCGGCGCGACATGCTGGAGCTACTGGA
CGACCGCTACGGCCAGCGCTCGACCATCGTGACCAGCCAGATGCCGGTGGACAACTGGCACGAATTGATCGGCGATCCGA
CCCTGGCCGACGCCATCCTCGACCGCATGGTGCACAACGCTTATCGGATCAACCTCAAGGGTGAGTCGATGCGCAAACGG
GCGAAGAAATTGACGACGCCGGGCACCTCGGACTAA

Upstream 100 bases:

>100_bases
AAAACCTGCCCTTGGCTCAAACCAACCTGCCCCTGCTACCGGGCGACCACGCCAACCTGCGCGGCCCCGGCTACTACCAC
TGAACACAAGGAATCCCACC

Downstream 100 bases:

>100_bases
CAATGCCACCCCTGCGTCGCTGCGCTTCGACTGCCTGTCCGAATGATCGTGGAACAGGTGTCCGGATCAGCGTGGGCTGA
GTGTCCGAATGGCGTGGAAT

Product: ISPsy14, transposition helper protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLPHPTLDKLQSLRLHGMLKALAEQLKIPDIGSLSFEERLGLLVDRELTERDDKRLSSRLRQARLRHNACLEDLDYRSPR
GLDKALILQLSSGQWLRDGLNLIINGPTGVGKTWLACALAHQACRDGYSVRYLRLPRLLEELGLAHGDGRFAKLMSSYAK
TDLLILDDWGLAPFTAEQRRDMLELLDDRYGQRSTIVTSQMPVDNWHELIGDPTLADAILDRMVHNAYRINLKGESMRKR
AKKLTTPGTSD

Sequences:

>Translated_251_residues
MLPHPTLDKLQSLRLHGMLKALAEQLKIPDIGSLSFEERLGLLVDRELTERDDKRLSSRLRQARLRHNACLEDLDYRSPR
GLDKALILQLSSGQWLRDGLNLIINGPTGVGKTWLACALAHQACRDGYSVRYLRLPRLLEELGLAHGDGRFAKLMSSYAK
TDLLILDDWGLAPFTAEQRRDMLELLDDRYGQRSTIVTSQMPVDNWHELIGDPTLADAILDRMVHNAYRINLKGESMRKR
AKKLTTPGTSD
>Mature_251_residues
MLPHPTLDKLQSLRLHGMLKALAEQLKIPDIGSLSFEERLGLLVDRELTERDDKRLSSRLRQARLRHNACLEDLDYRSPR
GLDKALILQLSSGQWLRDGLNLIINGPTGVGKTWLACALAHQACRDGYSVRYLRLPRLLEELGLAHGDGRFAKLMSSYAK
TDLLILDDWGLAPFTAEQRRDMLELLDDRYGQRSTIVTSQMPVDNWHELIGDPTLADAILDRMVHNAYRINLKGESMRKR
AKKLTTPGTSD

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611
- InterPro:   IPR013690 [H]

Pfam domain/function: PF01695 IstB; PF08483 IstB_N [H]

EC number: NA

Molecular weight: Translated: 28462; Mature: 28462

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPHPTLDKLQSLRLHGMLKALAEQLKIPDIGSLSFEERLGLLVDRELTERDDKRLSSRL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RQARLRHNACLEDLDYRSPRGLDKALILQLSSGQWLRDGLNLIINGPTGVGKTWLACALA
HHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCHHHCCCEEEEECCCCCCHHHHHHHHH
HQACRDGYSVRYLRLPRLLEELGLAHGDGRFAKLMSSYAKTDLLILDDWGLAPFTAEQRR
HHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHH
DMLELLDDRYGQRSTIVTSQMPVDNWHELIGDPTLADAILDRMVHNAYRINLKGESMRKR
HHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCHHHHHH
AKKLTTPGTSD
HHHCCCCCCCC
>Mature Secondary Structure
MLPHPTLDKLQSLRLHGMLKALAEQLKIPDIGSLSFEERLGLLVDRELTERDDKRLSSRL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RQARLRHNACLEDLDYRSPRGLDKALILQLSSGQWLRDGLNLIINGPTGVGKTWLACALA
HHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCHHHCCCEEEEECCCCCCHHHHHHHHH
HQACRDGYSVRYLRLPRLLEELGLAHGDGRFAKLMSSYAKTDLLILDDWGLAPFTAEQRR
HHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHH
DMLELLDDRYGQRSTIVTSQMPVDNWHELIGDPTLADAILDRMVHNAYRINLKGESMRKR
HHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCHHHHHH
AKKLTTPGTSD
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]