| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is dipZ [H]
Identifier: 146283591
GI number: 146283591
Start: 3537045
End: 3538841
Strand: Direct
Name: dipZ [H]
Synonym: PST_3271
Alternate gene names: 146283591
Gene position: 3537045-3538841 (Clockwise)
Preceding gene: 146283590
Following gene: 146283592
Centisome position: 77.44
GC content: 65.39
Gene sequence:
>1797_bases ATGCCGGCACAGCTTTACCGTGAGATCGCCATGCTTCGCCTCCTGAGCCTGCTGCTCCTGCTATTCGTGCTCCCCGCCAA CGCCGGCCTGTTCGACAACAAGCCCAGCGCCACCTTCGGCAGTGCGCTGAACAACAGCGGTGACTTCCTGCCGGTGCGCG AGGCGTTCAGACTCAGCCTTGTCGATGCAAAGCCCGAGCAGATCACTCTGCGCTTCGTCGCAGCAGAGGGCTACTACCTC TATCGGCACCGTTTTGCGTTCCAGACCGACGAGCCGGGCGTAGAAATCGGCGAGGCGCAACTGCCCGACGGAGTTGCCAA GGTCGACGACTATTTCGGCGAGATCGAGGCCTATTACGGCATCCTCGACATCGAAATCCCCATAACCAACCCTGACAATC GCCCCTTCGTCCTTCAGGTTTCCTACCAGGGCTGTGCCGACAAAGGCCTGTGTTACCCGCCGGAAACCGAATCGCTTTCC ATTGGTGACGGAGCCACACCAAGCACTGCAGAGGGTAGCGAAACAGGTAGCCGCGATCTTTCCTGGCGCTCCATCGCACT GTTCTTCCTCGCCGGCCTGGGCCTGACCTTCACGCCTTGCGTGCTACCGATGCTGCCAATCCTCACCGGGGTGGTTTTGC GCGACCAGCCCGGAGGCATGCGCAGCTTCCTGCTGTCGGTGACCTATGTACTGCCGATGGCCGGCGGTTTCGCCGTACTC GGCGCACTGATGGGCGTGTTCGGTGCCGAGCTGAATCTGCAGGCACGCCTGCAGTCGGCGTGGATTCTCGTGCCCTTCGC ACTGTTCTTCGTGGTCTTCGCGCTGGCCATGTTCGGCCTGTTCGAGCTGCGCCTGCCGCAGGCCTTGAGCGGCCGCCTCG ACCGTCTGGCCGGCAGCGCCCGCGGCGGTTCGTTCACTGGCGCCGCGATGCTGGGGGCGGTGTCCAGCCTGCTGGTATCG CCGTGCGTCTCCGCACCGCTGGCCGGTGCACTGCTCTATATCAGCGCCAGCGGCGACGCCGTGGGCGGCGGGCTGAAGCT GTTCGCCCTGGGCCTGGGCATGGGCGCGCCTCTGGTGTTGTTCGCCACCGGTGGTGGAGCCCTGTTGCCCAAGAGTGGGC CCTGGATGGTCGGCGTGCGCAACCTCTTCGGCGTGCTGCTGCTGGCCGTTGCGATCTGGATGCTCGAGCGCGTCCTGCCA GGCCCCATCGCCCTGGCACTCTGGGGATTGTTGGCGGCGGGCAGCGCGCTGTTCCTCGGCACCCTGGAGCTCACCAGCAA GACGCCTCGTCAGAAGCTTGCCCAGCTGCTCGGCCTGGCCCTGCTGGTCTACGCTCTTGCCGCCTGGGTCGGCGCTTTGC AAGGCGGCTCCGATCCGCTGCGGCCGCTGCCGATGGCCAGCGGCAGCGCGCCGGGCAGCCAGGCGGGCGAAGGTTGGCAT ACGGTTTCCACGCCTGCGGAACTGGACGCGCAACTGGCCGCTGCCCGTGCCGCCGGCCAGCCGCTGATGCTGGACTGGTA TGCCGATTGGTGCATCAGCTGCAAGGTCATCGAACGCGAGGTCTTCGCCAATCCGCAAGTGGCTCCGCGCCTGACCGACT ATCGTCTAATCCGCTTCGATATCACCGAGAGCAATGCCGCCCAGCGCAGCCTGCTGGACCGCTACAAGCTGTTCGGCCCG CCCGCCATCCTGTTCTTCGGTGGCGACGGAAAAGAGCTCAACGAGGTCCGCGTAGTCGGCGAGATAGACGCCTCCGGCTT CGCCGAGCGACTGGATCGAGCAGCAGCTCTTCGCTAG
Upstream 100 bases:
>100_bases CGTCAGCTCCGTGGAATCGAAAAGCACGACAGCATCTGGTTGCAAACTGATCGGCAGAGCGACAGTTGAGCGCGGGCGCC GGACGCCGGCCGCGGTTATC
Downstream 100 bases:
>100_bases GTGCGGAACGCAATCCCCACGCTTTGTCGCAAATACTCGAGACATCCCTACGGCCGACGAATGATTGCCGGAATCTTCAG ACATAATGCGGGCATTTCCT
Product: thiol:disulfide interchange protein precursor
Products: NA
Alternate protein names: Protein-disulfide reductase 1; Disulfide reductase 1 [H]
Number of amino acids: Translated: 598; Mature: 597
Protein sequence:
>598_residues MPAQLYREIAMLRLLSLLLLLFVLPANAGLFDNKPSATFGSALNNSGDFLPVREAFRLSLVDAKPEQITLRFVAAEGYYL YRHRFAFQTDEPGVEIGEAQLPDGVAKVDDYFGEIEAYYGILDIEIPITNPDNRPFVLQVSYQGCADKGLCYPPETESLS IGDGATPSTAEGSETGSRDLSWRSIALFFLAGLGLTFTPCVLPMLPILTGVVLRDQPGGMRSFLLSVTYVLPMAGGFAVL GALMGVFGAELNLQARLQSAWILVPFALFFVVFALAMFGLFELRLPQALSGRLDRLAGSARGGSFTGAAMLGAVSSLLVS PCVSAPLAGALLYISASGDAVGGGLKLFALGLGMGAPLVLFATGGGALLPKSGPWMVGVRNLFGVLLLAVAIWMLERVLP GPIALALWGLLAAGSALFLGTLELTSKTPRQKLAQLLGLALLVYALAAWVGALQGGSDPLRPLPMASGSAPGSQAGEGWH TVSTPAELDAQLAAARAAGQPLMLDWYADWCISCKVIEREVFANPQVAPRLTDYRLIRFDITESNAAQRSLLDRYKLFGP PAILFFGGDGKELNEVRVVGEIDASGFAERLDRAAALR
Sequences:
>Translated_598_residues MPAQLYREIAMLRLLSLLLLLFVLPANAGLFDNKPSATFGSALNNSGDFLPVREAFRLSLVDAKPEQITLRFVAAEGYYL YRHRFAFQTDEPGVEIGEAQLPDGVAKVDDYFGEIEAYYGILDIEIPITNPDNRPFVLQVSYQGCADKGLCYPPETESLS IGDGATPSTAEGSETGSRDLSWRSIALFFLAGLGLTFTPCVLPMLPILTGVVLRDQPGGMRSFLLSVTYVLPMAGGFAVL GALMGVFGAELNLQARLQSAWILVPFALFFVVFALAMFGLFELRLPQALSGRLDRLAGSARGGSFTGAAMLGAVSSLLVS PCVSAPLAGALLYISASGDAVGGGLKLFALGLGMGAPLVLFATGGGALLPKSGPWMVGVRNLFGVLLLAVAIWMLERVLP GPIALALWGLLAAGSALFLGTLELTSKTPRQKLAQLLGLALLVYALAAWVGALQGGSDPLRPLPMASGSAPGSQAGEGWH TVSTPAELDAQLAAARAAGQPLMLDWYADWCISCKVIEREVFANPQVAPRLTDYRLIRFDITESNAAQRSLLDRYKLFGP PAILFFGGDGKELNEVRVVGEIDASGFAERLDRAAALR >Mature_597_residues PAQLYREIAMLRLLSLLLLLFVLPANAGLFDNKPSATFGSALNNSGDFLPVREAFRLSLVDAKPEQITLRFVAAEGYYLY RHRFAFQTDEPGVEIGEAQLPDGVAKVDDYFGEIEAYYGILDIEIPITNPDNRPFVLQVSYQGCADKGLCYPPETESLSI GDGATPSTAEGSETGSRDLSWRSIALFFLAGLGLTFTPCVLPMLPILTGVVLRDQPGGMRSFLLSVTYVLPMAGGFAVLG ALMGVFGAELNLQARLQSAWILVPFALFFVVFALAMFGLFELRLPQALSGRLDRLAGSARGGSFTGAAMLGAVSSLLVSP CVSAPLAGALLYISASGDAVGGGLKLFALGLGMGAPLVLFATGGGALLPKSGPWMVGVRNLFGVLLLAVAIWMLERVLPG PIALALWGLLAAGSALFLGTLELTSKTPRQKLAQLLGLALLVYALAAWVGALQGGSDPLRPLPMASGSAPGSQAGEGWHT VSTPAELDAQLAAARAAGQPLMLDWYADWCISCKVIEREVFANPQVAPRLTDYRLIRFDITESNAAQRSLLDRYKLFGPP AILFFGGDGKELNEVRVVGEIDASGFAERLDRAAALR
Specific function: Involved in the formation of correct disulfide bonds in some periplasmic proteins and in the assembly of the periplasmic C-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of
COG id: COG4232
COG function: function code OC; Thiol:disulfide interchange protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790578, Length=590, Percent_Identity=35.0847457627119, Blast_Score=336, Evalue=3e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003834 - InterPro: IPR022910 - InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF02683 DsbD [H]
EC number: =1.8.1.8 [H]
Molecular weight: Translated: 63494; Mature: 63362
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAQLYREIAMLRLLSLLLLLFVLPANAGLFDNKPSATFGSALNNSGDFLPVREAFRLSL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEHHHHHEEEE VDAKPEQITLRFVAAEGYYLYRHRFAFQTDEPGVEIGEAQLPDGVAKVDDYFGEIEAYYG ECCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHEEE ILDIEIPITNPDNRPFVLQVSYQGCADKGLCYPPETESLSIGDGATPSTAEGSETGSRDL EEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC SWRSIALFFLAGLGLTFTPCVLPMLPILTGVVLRDQPGGMRSFLLSVTYVLPMAGGFAVL CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHCCCHHHHH GALMGVFGAELNLQARLQSAWILVPFALFFVVFALAMFGLFELRLPQALSGRLDRLAGSA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC RGGSFTGAAMLGAVSSLLVSPCVSAPLAGALLYISASGDAVGGGLKLFALGLGMGAPLVL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEHHHHCCCCCCEEE FATGGGALLPKSGPWMVGVRNLFGVLLLAVAIWMLERVLPGPIALALWGLLAAGSALFLG EECCCCEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEE TLELTSKTPRQKLAQLLGLALLVYALAAWVGALQGGSDPLRPLPMASGSAPGSQAGEGWH EEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE TVSTPAELDAQLAAARAAGQPLMLDWYADWCISCKVIEREVFANPQVAPRLTDYRLIRFD ECCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE ITESNAAQRSLLDRYKLFGPPAILFFGGDGKELNEVRVVGEIDASGFAERLDRAAALR ECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHCCC >Mature Secondary Structure PAQLYREIAMLRLLSLLLLLFVLPANAGLFDNKPSATFGSALNNSGDFLPVREAFRLSL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEHHHHHEEEE VDAKPEQITLRFVAAEGYYLYRHRFAFQTDEPGVEIGEAQLPDGVAKVDDYFGEIEAYYG ECCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHEEE ILDIEIPITNPDNRPFVLQVSYQGCADKGLCYPPETESLSIGDGATPSTAEGSETGSRDL EEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC SWRSIALFFLAGLGLTFTPCVLPMLPILTGVVLRDQPGGMRSFLLSVTYVLPMAGGFAVL CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHCCCHHHHH GALMGVFGAELNLQARLQSAWILVPFALFFVVFALAMFGLFELRLPQALSGRLDRLAGSA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC RGGSFTGAAMLGAVSSLLVSPCVSAPLAGALLYISASGDAVGGGLKLFALGLGMGAPLVL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEHHHHCCCCCCEEE FATGGGALLPKSGPWMVGVRNLFGVLLLAVAIWMLERVLPGPIALALWGLLAAGSALFLG EECCCCEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEE TLELTSKTPRQKLAQLLGLALLVYALAAWVGALQGGSDPLRPLPMASGSAPGSQAGEGWH EEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE TVSTPAELDAQLAAARAAGQPLMLDWYADWCISCKVIEREVFANPQVAPRLTDYRLIRFD ECCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE ITESNAAQRSLLDRYKLFGPPAILFFGGDGKELNEVRVVGEIDASGFAERLDRAAALR ECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353916; 10984043 [H]