| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is yebQ [C]
Identifier: 146283429
GI number: 146283429
Start: 3339552
End: 3341180
Strand: Direct
Name: yebQ [C]
Synonym: PST_3102
Alternate gene names: 146283429
Gene position: 3339552-3341180 (Clockwise)
Preceding gene: 146283428
Following gene: 146283430
Centisome position: 73.12
GC content: 67.34
Gene sequence:
>1629_bases ATGCCCGAATACCTTGCCCCGGTACCACGCTGGGAACCCCACGAACGCCCGTCCATGCCCGGCTCGCCGGCGATCCTGCT GCACAGTCCGCCGCGGCGCCTGGCCTACGCCGCGGTTGCCGTACTGGTGGGGTTGACCGGCGGGCTCGGCAACGCGCTAT TCATCGCCAACCTGCCGGCGATCCAGGGCGATCTGGGCCTGACGCCCGCGCAGGGCGCCTGGCTGCCGGCCGCCTACTTC ATGGTCAACGTCTCGACCAACCTGCTGCTGATCAAGGTGCGCCAGCAATACGGCCTGCGGCATTTCGCCGAGCTGGGGTT GGCGGTCTATGCGCTGCTCAGCATCGCCCATGTGTTCGTCGAAGGCCTGGGCATGGCGATGTTCGTGCGCGCGGCGAGCG GTTTCGCCGCAGCGGCCACCACGTCGCTGGGGCTGTTCTACATGCTCCAGGCCTTTTCCAAGACCCATCTGCCGCGCGGG GTGATCGTCGCCTTCGGCCTGACGCAAGTCGCCACGCCGCTGGCCTGGCTGTTATCGCCACCATTGGTGGATATCGGCCA GTGGCATCGCCTGTACGTGTTCGAAAGCGGCCTGGCGCTCTGCTCGCTGGCCGCCGTGGTGGTGCTCAAGCTGCCGCTGG GCGAACGCATCAAGGTGTTCGAGCCGCTGGATTTCCTTACCTTCGCCCTCTTCGCCCCGGCGCTGGCGCTGGTTGCCGCA GTCTTCGCCCAGGGCCGCGTGCAGTGGTGGACCGAGGCGCCGTGGCTGGGCTACGCACTGATCGCGGCCCTGCTGCTCAG CTGCCTGACCTTCATGATCGAACATCACCGGCGCAACCCCTTGCTGCAGACACGCTGGCTGGGCACCGCCGAGATGCTGC GCTTCGCCTTCGGTGCGCTGGCGCTGCGCTTTCTGCTGTCCGAACAGAGCTATGGCGCGGTCGGCCTGCTGCAAACGCTC GGCATGGGGCCGGATCAGCTGCGCCCGCTGTACGCGGTGATTCTGCTGGGGCTGGTGATGGGCATCGCCGCCAGCGCGCT GAGCTTCAGCCCGCGGACCGCCGCGGCGCAGATACTGCTCTCGATCCTGCTGATCGGCATCGCCAGCTTTCTCGACGTCG ATGCCACCAGCCAGACCCGCCCGCACGACCTCTTCCTCAGCCAAGGATTGCTGTCGTTCGCCAGCGGCATGTTCCTCGGC CCGCTGCTGATCACCGGCATTGGAAAGGCGCTGGCCAACGGGCCGAACTACCTGGTCAGCTTCATCGTGCTGTTTTCCAT GACCCAAAGCCTGGGCGGGCTTGCCGGTCCCGCCGTGTTCGGCACCTATCAGATCGTCCGCGAGCAGTACCATTCGGCAC ACCTGACCGAGCAGGTGGTGCCGGACGACCCACGCATCGCCGCCCGTCTCGCCCCACAGAGCCAGGCAGTGGCCGCCACC CAGCTCGACCCGCAGCTGCGCCAGGCACTCGGCGGCGCTCGCCTGTCGCAGACCGTCACGCGTGAAGCCAACGTGCTGGC CTTCAATGACGTGTTCCGCCTGATCGGCCTGCTCGCCATCGCCGTGCTCGGCTGGTCACTGTTCCACACCCTGCGCCTGG CGCGACAGAAGAAGGCTTCCGCCCCATGA
Upstream 100 bases:
>100_bases GCTGGCGATGCCGTGATCGGGTGAGCGGAGGGCGAAATTCGTTGCAGCGCTTGTCCTACCTAGGACCGCGCCCGTCGGCG CAACAAGCTGCCGAGTCCAG
Downstream 100 bases:
>100_bases GCGATGCGCGCACACCCGACGCCGAGACCACGCCGACCACGGACGCCGGCGGCACACCGCCCGAGCCACCCAAGACGATC CAGCCAAGCCGCCGCTCGAT
Product: transporter, putative
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transport Protein Transmembrane; Facilitator Superfamily Transporter; MFS Drug Efflux Transporter RmrB; Transporter Facilitator Family; Multidrug Resistance Protein B; Transmembrane Efflux Pump Protein; Tat Pathway Signal Sequence Domain Protein; MFS Drug Efflux Transporter; MFS Permease; LOW QUALITY PROTEIN MFS Drug Efflux Transporter; Efflux Protein; Facilitator Superfamily Transporter Protein; MFS Family Transporter; HlyD Family Protein; Facilitator Family Transporter; Facilitator Superfamily Permease
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MPEYLAPVPRWEPHERPSMPGSPAILLHSPPRRLAYAAVAVLVGLTGGLGNALFIANLPAIQGDLGLTPAQGAWLPAAYF MVNVSTNLLLIKVRQQYGLRHFAELGLAVYALLSIAHVFVEGLGMAMFVRAASGFAAAATTSLGLFYMLQAFSKTHLPRG VIVAFGLTQVATPLAWLLSPPLVDIGQWHRLYVFESGLALCSLAAVVVLKLPLGERIKVFEPLDFLTFALFAPALALVAA VFAQGRVQWWTEAPWLGYALIAALLLSCLTFMIEHHRRNPLLQTRWLGTAEMLRFAFGALALRFLLSEQSYGAVGLLQTL GMGPDQLRPLYAVILLGLVMGIAASALSFSPRTAAAQILLSILLIGIASFLDVDATSQTRPHDLFLSQGLLSFASGMFLG PLLITGIGKALANGPNYLVSFIVLFSMTQSLGGLAGPAVFGTYQIVREQYHSAHLTEQVVPDDPRIAARLAPQSQAVAAT QLDPQLRQALGGARLSQTVTREANVLAFNDVFRLIGLLAIAVLGWSLFHTLRLARQKKASAP
Sequences:
>Translated_542_residues MPEYLAPVPRWEPHERPSMPGSPAILLHSPPRRLAYAAVAVLVGLTGGLGNALFIANLPAIQGDLGLTPAQGAWLPAAYF MVNVSTNLLLIKVRQQYGLRHFAELGLAVYALLSIAHVFVEGLGMAMFVRAASGFAAAATTSLGLFYMLQAFSKTHLPRG VIVAFGLTQVATPLAWLLSPPLVDIGQWHRLYVFESGLALCSLAAVVVLKLPLGERIKVFEPLDFLTFALFAPALALVAA VFAQGRVQWWTEAPWLGYALIAALLLSCLTFMIEHHRRNPLLQTRWLGTAEMLRFAFGALALRFLLSEQSYGAVGLLQTL GMGPDQLRPLYAVILLGLVMGIAASALSFSPRTAAAQILLSILLIGIASFLDVDATSQTRPHDLFLSQGLLSFASGMFLG PLLITGIGKALANGPNYLVSFIVLFSMTQSLGGLAGPAVFGTYQIVREQYHSAHLTEQVVPDDPRIAARLAPQSQAVAAT QLDPQLRQALGGARLSQTVTREANVLAFNDVFRLIGLLAIAVLGWSLFHTLRLARQKKASAP >Mature_541_residues PEYLAPVPRWEPHERPSMPGSPAILLHSPPRRLAYAAVAVLVGLTGGLGNALFIANLPAIQGDLGLTPAQGAWLPAAYFM VNVSTNLLLIKVRQQYGLRHFAELGLAVYALLSIAHVFVEGLGMAMFVRAASGFAAAATTSLGLFYMLQAFSKTHLPRGV IVAFGLTQVATPLAWLLSPPLVDIGQWHRLYVFESGLALCSLAAVVVLKLPLGERIKVFEPLDFLTFALFAPALALVAAV FAQGRVQWWTEAPWLGYALIAALLLSCLTFMIEHHRRNPLLQTRWLGTAEMLRFAFGALALRFLLSEQSYGAVGLLQTLG MGPDQLRPLYAVILLGLVMGIAASALSFSPRTAAAQILLSILLIGIASFLDVDATSQTRPHDLFLSQGLLSFASGMFLGP LLITGIGKALANGPNYLVSFIVLFSMTQSLGGLAGPAVFGTYQIVREQYHSAHLTEQVVPDDPRIAARLAPQSQAVAATQ LDPQLRQALGGARLSQTVTREANVLAFNDVFRLIGLLAIAVLGWSLFHTLRLARQKKASAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral membrane protein. Inner membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58265; Mature: 58134
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEYLAPVPRWEPHERPSMPGSPAILLHSPPRRLAYAAVAVLVGLTGGLGNALFIANLPA CCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCC IQGDLGLTPAQGAWLPAAYFMVNVSTNLLLIKVRQQYGLRHFAELGLAVYALLSIAHVFV CCCCCCCCCCCCCCCCHHHHEEECCCCEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHH EGLGMAMFVRAASGFAAAATTSLGLFYMLQAFSKTHLPRGVIVAFGLTQVATPLAWLLSP HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC PLVDIGQWHRLYVFESGLALCSLAAVVVLKLPLGERIKVFEPLDFLTFALFAPALALVAA CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHH VFAQGRVQWWTEAPWLGYALIAALLLSCLTFMIEHHRRNPLLQTRWLGTAEMLRFAFGAL HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHH ALRFLLSEQSYGAVGLLQTLGMGPDQLRPLYAVILLGLVMGIAASALSFSPRTAAAQILL HHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SILLIGIASFLDVDATSQTRPHDLFLSQGLLSFASGMFLGPLLITGIGKALANGPNYLVS HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FIVLFSMTQSLGGLAGPAVFGTYQIVREQYHSAHLTEQVVPDDPRIAARLAPQSQAVAAT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH QLDPQLRQALGGARLSQTVTREANVLAFNDVFRLIGLLAIAVLGWSLFHTLRLARQKKAS HCCHHHHHHHCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AP CC >Mature Secondary Structure PEYLAPVPRWEPHERPSMPGSPAILLHSPPRRLAYAAVAVLVGLTGGLGNALFIANLPA CCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCC IQGDLGLTPAQGAWLPAAYFMVNVSTNLLLIKVRQQYGLRHFAELGLAVYALLSIAHVFV CCCCCCCCCCCCCCCCHHHHEEECCCCEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHH EGLGMAMFVRAASGFAAAATTSLGLFYMLQAFSKTHLPRGVIVAFGLTQVATPLAWLLSP HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC PLVDIGQWHRLYVFESGLALCSLAAVVVLKLPLGERIKVFEPLDFLTFALFAPALALVAA CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHH VFAQGRVQWWTEAPWLGYALIAALLLSCLTFMIEHHRRNPLLQTRWLGTAEMLRFAFGAL HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHH ALRFLLSEQSYGAVGLLQTLGMGPDQLRPLYAVILLGLVMGIAASALSFSPRTAAAQILL HHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SILLIGIASFLDVDATSQTRPHDLFLSQGLLSFASGMFLGPLLITGIGKALANGPNYLVS HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FIVLFSMTQSLGGLAGPAVFGTYQIVREQYHSAHLTEQVVPDDPRIAARLAPQSQAVAAT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH QLDPQLRQALGGARLSQTVTREANVLAFNDVFRLIGLLAIAVLGWSLFHTLRLARQKKAS HCCHHHHHHHCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA