| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146283426
Identifier: 146283426
GI number: 146283426
Start: 3335753
End: 3336562
Strand: Direct
Name: 146283426
Synonym: PST_3099
Alternate gene names: NA
Gene position: 3335753-3336562 (Clockwise)
Preceding gene: 146283425
Following gene: 146283428
Centisome position: 73.03
GC content: 65.19
Gene sequence:
>810_bases ATGCATTCCAAGACTGCCCCGCTCTGCCTCGCCCTCGCCGGCGGCCTGCTCGCCGCCCCGGCCATGGCCGGCGACCTGCT GCACTGGCAGAACAACAGCCTCACCTACCTCTACGGCCAGGACTACAAGGTCGACCCCGACACCCAGCAGACCGTCACCT TCGAGCACGCCAGCGGCTGGGCCTGGGGCGACATGTTCTTTTTCGTCGACAACATCTGGTTCAACGGCGTCAGCGGCAGC GACGGCCACACCTACTACGGCGAATTCAGCCCGCGCCTGTCGCTGGGCAAGGTCAGCGGCCGCGACCTGTCGTTCGGCCC GGTCAAGGACGTGCTGATCGGCGCCACCTACGAACGCGGCGAAAGCTCGGCGGACGGCGTGCCGAACCAGAACTACCTGC TCGGCCCGGCGGTGGACCTGGAGCTGCCCGGCTTCGACCGCTTCGCCCTCAACTTCTACTATCGCAAGCCCGACGGCTCC ACCGGACGCGCGTCCGGCCAGTGGCAGGTCACCCCGACCTGGGCCATGACCTTTCCGGTCGGCAAGTCCGACATCCTCTT CGACGGCTTCATCGACTGGGTGGTCAACGATGCCGGCTCGAAGTCCCGCGGCGACTTCCTCTCGAAGAACCTGCACATCG TGCCGCAGATCAAGTACGACCTGGGCAAGGCGCTGGACTACGCGCCGGGTAAGCTCTACGTCGGTATCGAGTACGACTAC TGGTCGAACAAGTACGGCCTGGAAGACGGCTCGCTGCCGTTCAAGACCGACCAGAACACCTTCAGCGCCATCGTCAAGGC GCACTTCTGA
Upstream 100 bases:
>100_bases TGAGTCGCCGCGCTCGCACTTCCCGCCGCCAGGCCCTTCGCGGAGAATACGCGCCGGTCGCCGCTCGGCTTCATGAAAGA CACCACAGGAAAACCACACC
Downstream 100 bases:
>100_bases TCGCGCCGGCCGGGGCACGGGCCCCGGCCACCCCGCCTTACCTCCCTCCCGACCGTCGAACCACCGCGCCCGGCTCGGCG GGTCGATGCCTCAGAGCCTG
Product: nucleoside-binding outer membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MHSKTAPLCLALAGGLLAAPAMAGDLLHWQNNSLTYLYGQDYKVDPDTQQTVTFEHASGWAWGDMFFFVDNIWFNGVSGS DGHTYYGEFSPRLSLGKVSGRDLSFGPVKDVLIGATYERGESSADGVPNQNYLLGPAVDLELPGFDRFALNFYYRKPDGS TGRASGQWQVTPTWAMTFPVGKSDILFDGFIDWVVNDAGSKSRGDFLSKNLHIVPQIKYDLGKALDYAPGKLYVGIEYDY WSNKYGLEDGSLPFKTDQNTFSAIVKAHF
Sequences:
>Translated_269_residues MHSKTAPLCLALAGGLLAAPAMAGDLLHWQNNSLTYLYGQDYKVDPDTQQTVTFEHASGWAWGDMFFFVDNIWFNGVSGS DGHTYYGEFSPRLSLGKVSGRDLSFGPVKDVLIGATYERGESSADGVPNQNYLLGPAVDLELPGFDRFALNFYYRKPDGS TGRASGQWQVTPTWAMTFPVGKSDILFDGFIDWVVNDAGSKSRGDFLSKNLHIVPQIKYDLGKALDYAPGKLYVGIEYDY WSNKYGLEDGSLPFKTDQNTFSAIVKAHF >Mature_269_residues MHSKTAPLCLALAGGLLAAPAMAGDLLHWQNNSLTYLYGQDYKVDPDTQQTVTFEHASGWAWGDMFFFVDNIWFNGVSGS DGHTYYGEFSPRLSLGKVSGRDLSFGPVKDVLIGATYERGESSADGVPNQNYLLGPAVDLELPGFDRFALNFYYRKPDGS TGRASGQWQVTPTWAMTFPVGKSDILFDGFIDWVVNDAGSKSRGDFLSKNLHIVPQIKYDLGKALDYAPGKLYVGIEYDY WSNKYGLEDGSLPFKTDQNTFSAIVKAHF
Specific function: Unknown
COG id: COG3248
COG function: function code M; Nucleoside-binding outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29737; Mature: 29737
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSKTAPLCLALAGGLLAAPAMAGDLLHWQNNSLTYLYGQDYKVDPDTQQTVTFEHASGW CCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCEEECCCCCEEEEEECCCCC AWGDMFFFVDNIWFNGVSGSDGHTYYGEFSPRLSLGKVSGRDLSFGPVKDVLIGATYERG EEHHEEEEEEEEEECCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCC ESSADGVPNQNYLLGPAVDLELPGFDRFALNFYYRKPDGSTGRASGQWQVTPTWAMTFPV CCCCCCCCCCCEEECCEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECC GKSDILFDGFIDWVVNDAGSKSRGDFLSKNLHIVPQIKYDLGKALDYAPGKLYVGIEYDY CCCCEEEHHEEEEEECCCCCCCCCCHHHCCEEEEEEEHHHHCCCCCCCCCEEEEEEEECC WSNKYGLEDGSLPFKTDQNTFSAIVKAHF CCCCCCCCCCCCCCCCCCHHHEEEEEECC >Mature Secondary Structure MHSKTAPLCLALAGGLLAAPAMAGDLLHWQNNSLTYLYGQDYKVDPDTQQTVTFEHASGW CCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCEEECCCCCEEEEEECCCCC AWGDMFFFVDNIWFNGVSGSDGHTYYGEFSPRLSLGKVSGRDLSFGPVKDVLIGATYERG EEHHEEEEEEEEEECCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCC ESSADGVPNQNYLLGPAVDLELPGFDRFALNFYYRKPDGSTGRASGQWQVTPTWAMTFPV CCCCCCCCCCCEEECCEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECC GKSDILFDGFIDWVVNDAGSKSRGDFLSKNLHIVPQIKYDLGKALDYAPGKLYVGIEYDY CCCCEEEHHEEEEEECCCCCCCCCCHHHCCEEEEEEEHHHHCCCCCCCCCEEEEEEEECC WSNKYGLEDGSLPFKTDQNTFSAIVKAHF CCCCCCCCCCCCCCCCCCHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA