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The map label for this gene is yomI [H]

Identifier: 146283341

GI number: 146283341

Start: 3242207

End: 3243031

Strand: Direct

Name: yomI [H]

Synonym: PST_3011

Alternate gene names: 146283341

Gene position: 3242207-3243031 (Clockwise)

Preceding gene: 146283340

Following gene: 146283342

Centisome position: 70.99

GC content: 66.79

Gene sequence:

>825_bases
ATGTCTCGCGTCTTCGCCCTGCTGTTCGCCCTCTCCCTCGCATTGCCTGCCCAGGCCGAGGGCTTCATCACCCGCCTGCT
GAACAAACCGGTGCCCGGCGGCGTCGCCGTGATCGAACTCGGCAACGGCCCCAGCGCACCGCAGGCCCGCTATCAGGGCA
AGCCGACCCTGGTGGTGCGCGAGGATGGCGAGCGCTGGATCGCCATCGTCGGCATCCCGTTGTCGGCAAAGGCTGGCCCC
CAGCAGCTGGAGGTCGATGGCCGCAGCACCAGCTTCCAGGTTGGCAACCGCGACTATCGCGCGCAGCACATCACCCTGAA
GAACCAGCGCCAGGTCAACCCGAACCCCGCAGACCTCAAGCGCATCGAGCGGGAACTGGATGAGCAGAACCGCGCCTACC
GGCAGTTCAGCACCCGCCAGCCGAGCAATCTGTTGTTCGACCGCCCGGTGGACGGCCCGCTGTCCTCGCCGTTCGGCCTG
CGCCGTTTCTTCAACGGCGAGGAGCGCAACCCGCACTCGGGCCTGGATTTCGCCGCCAAGACCGGCACCCCGATCAAGGC
GCCGGCGGCCGGCCAGGTCATACTCACCGGTGACTATTTCTTCAACGGCAAGACCGTGTTCGTCGACCACGGTCAGGGGC
TGATCAGCATGTTCTGTCACCTGTCCGAAATCGGCGTGAAGGTCGGCGATCAGCTGGCGCGCGGCCAGGTTCTCGGCAAG
GTCGGCGCGACCGGCCGCGCCACCGGCCCGCACCTGCACTGGAACGTCAGCCTGAACGACGCCCGTGTCGATCCGGCGAT
CTTCATCGGTGCCTACAAACCCTGA

Upstream 100 bases:

>100_bases
GCTCTAAGCAAGCCGAGCCGGCAATCTCCTGACATTCTTGGCCCTTTCTCTTGCCGGAGGTTTACGCGAGGATGGGCCGT
TTCCTGCAACGGACCCATCC

Downstream 100 bases:

>100_bases
ACCACGAGGAAGCACAGCGATGCGCATCAAGGCAACGGATTCCACCCTGTTGATCGTCGACATCCAGGAGCGCCTGTTTC
CGGTGATCCTGGACGCCGCC

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSRVFALLFALSLALPAQAEGFITRLLNKPVPGGVAVIELGNGPSAPQARYQGKPTLVVREDGERWIAIVGIPLSAKAGP
QQLEVDGRSTSFQVGNRDYRAQHITLKNQRQVNPNPADLKRIERELDEQNRAYRQFSTRQPSNLLFDRPVDGPLSSPFGL
RRFFNGEERNPHSGLDFAAKTGTPIKAPAAGQVILTGDYFFNGKTVFVDHGQGLISMFCHLSEIGVKVGDQLARGQVLGK
VGATGRATGPHLHWNVSLNDARVDPAIFIGAYKP

Sequences:

>Translated_274_residues
MSRVFALLFALSLALPAQAEGFITRLLNKPVPGGVAVIELGNGPSAPQARYQGKPTLVVREDGERWIAIVGIPLSAKAGP
QQLEVDGRSTSFQVGNRDYRAQHITLKNQRQVNPNPADLKRIERELDEQNRAYRQFSTRQPSNLLFDRPVDGPLSSPFGL
RRFFNGEERNPHSGLDFAAKTGTPIKAPAAGQVILTGDYFFNGKTVFVDHGQGLISMFCHLSEIGVKVGDQLARGQVLGK
VGATGRATGPHLHWNVSLNDARVDPAIFIGAYKP
>Mature_273_residues
SRVFALLFALSLALPAQAEGFITRLLNKPVPGGVAVIELGNGPSAPQARYQGKPTLVVREDGERWIAIVGIPLSAKAGPQ
QLEVDGRSTSFQVGNRDYRAQHITLKNQRQVNPNPADLKRIERELDEQNRAYRQFSTRQPSNLLFDRPVDGPLSSPFGLR
RFFNGEERNPHSGLDFAAKTGTPIKAPAAGQVILTGDYFFNGKTVFVDHGQGLISMFCHLSEIGVKVGDQLARGQVLGKV
GATGRATGPHLHWNVSLNDARVDPAIFIGAYKP

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 10 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=120, Percent_Identity=35, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR008258
- InterPro:   IPR016047
- InterPro:   IPR010090
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01551 Peptidase_M23; PF10145 PhageMin_Tail; PF01464 SLT [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 29843; Mature: 29712

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVFALLFALSLALPAQAEGFITRLLNKPVPGGVAVIELGNGPSAPQARYQGKPTLVVR
CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHCCCCEEEEE
EDGERWIAIVGIPLSAKAGPQQLEVDGRSTSFQVGNRDYRAQHITLKNQRQVNPNPADLK
ECCCEEEEEEEEECCCCCCCCEEEECCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHH
RIERELDEQNRAYRQFSTRQPSNLLFDRPVDGPLSSPFGLRRFFNGEERNPHSGLDFAAK
HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEC
TGTPIKAPAAGQVILTGDYFFNGKTVFVDHGQGLISMFCHLSEIGVKVGDQLARGQVLGK
CCCCCCCCCCCEEEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VGATGRATGPHLHWNVSLNDARVDPAIFIGAYKP
CCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCC
>Mature Secondary Structure 
SRVFALLFALSLALPAQAEGFITRLLNKPVPGGVAVIELGNGPSAPQARYQGKPTLVVR
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHCCCCEEEEE
EDGERWIAIVGIPLSAKAGPQQLEVDGRSTSFQVGNRDYRAQHITLKNQRQVNPNPADLK
ECCCEEEEEEEEECCCCCCCCEEEECCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHH
RIERELDEQNRAYRQFSTRQPSNLLFDRPVDGPLSSPFGLRRFFNGEERNPHSGLDFAAK
HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEC
TGTPIKAPAAGQVILTGDYFFNGKTVFVDHGQGLISMFCHLSEIGVKVGDQLARGQVLGK
CCCCCCCCCCCEEEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VGATGRATGPHLHWNVSLNDARVDPAIFIGAYKP
CCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]