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The map label for this gene is tnpA [H]

Identifier: 146283331

GI number: 146283331

Start: 3230899

End: 3232101

Strand: Direct

Name: tnpA [H]

Synonym: PST_3001

Alternate gene names: 146283331

Gene position: 3230899-3232101 (Clockwise)

Preceding gene: 162139460

Following gene: 229577459

Centisome position: 70.74

GC content: 61.18

Gene sequence:

>1203_bases
GTGCATCCTATTGATCTTGCCTCGTTCTGGCCAGGCTATGACGCCGTTGCCTGCCGTTCATCCGCCAACAACTCCCTTCT
GATTGAGCTCGAGCCTCAAGCCGGTTCAGTGCCCAAGTGCGGGCGTTGTGGTCAGCTCAGTCCGTTGATTCACGAGCGCC
GAATTCGTCTGGTGCGCGATCGTGATCTGTTCGATCAGCGCGTCTTGCTTCAACTACCCGTGCGCCGAGTCGATTGCCTG
AACTGTGGTCGGGTGACCGAGCGGATCGACTGGCTGGAGCCTGCATCTCGCCTGACCCGGCGGTTACAGGTCTGGCTCGA
AAGCTTGCTGCGGCTGCTGCCGATCAGCCACGTCAGCCAGCTCACCGGCCTGCACTGGCACACCCTCAAGACGCTCGACA
AGCGCCGCCTGCAAGCCGAGGTAGGCACCTTCTATTCAAGCGGTGTCCGCCGCCTGGTGATGGACGAGTTCGCCCTGCAC
AAGGGGCATCGCTATGCCACGGTCATCATGGACGCCGAGCGAACACGGGTGCTGTGGGTCGGCCACGGCAACAGCCGTGA
GGCGATCCGCCCGTTCTTTGAATTGCTCGGCGAGCACTGCCAGCAGATTGAGGCGGTGGCCATGGACATGAACACGGCTT
TCGACCTGGAGGTGAAGAAGCATTGCCCGCAGGCCGAAGTGGTGTACGACCTGTTTCACGTCGTCGCGCGCTACGGTCGG
GATGTGATCGACCGAATCCGGGTCGACCAGGCCAACCTTCTGCGCGAAGACAAGCCGGCACGAAAGGCGGTCAAGCAGAG
TCGTTGGCTGCTGCTGCGCAACCGCGACAACCTGAAGGACGGACAGGCCGTGCAGTTACAGGAGCTGCTTGCTGCCAACC
AGCCGTTGGCTACGGTCTATGTGCTCAAGGATGCGCTGAAGGATGTTTGGTACGCCCCCAGCGTACGAGAGGGTTGGCGA
CGCTGGCGAACCTGGCTGCGACATGCTCGCGAGAGCGACCTCGCGCCGCTGCAACGCTTCGCTCGCAACCTGCGCAAATA
CGCGCGAGGCATCCTTGCCAGTGCTCACTTCCACATGCATACCAGCGTCCTTGAGGGTGTTAACAACCGCATCAAGGTAA
TCAAGCGCATGGCCTATGGATTCCGGGACTCGGAGTACTTCTTCCTGAAAATCAAGGCCGCCTTCCCCGGGAAAGCGCGA
TGA

Upstream 100 bases:

>100_bases
AGGTTCTTCGCGGACTCTGGGGGAAGAGCGAGTTGACAGTCAGGGAAGCAGGTAAATTGGCAGTCGCCAAACACACCCTT
CACCTGTCCCTGCTGTCGCC

Downstream 100 bases:

>100_bases
ACCAAAAAAAAGCCCGCATCCATGGATGCGGGCATTCACTGGCGCGCTGTTGCGGCGCCTGAAACTCAAGCCTCGGTCTT
GCCTACCGCGGACTTGATCA

Product: ISRSO15-transposase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MHPIDLASFWPGYDAVACRSSANNSLLIELEPQAGSVPKCGRCGQLSPLIHERRIRLVRDRDLFDQRVLLQLPVRRVDCL
NCGRVTERIDWLEPASRLTRRLQVWLESLLRLLPISHVSQLTGLHWHTLKTLDKRRLQAEVGTFYSSGVRRLVMDEFALH
KGHRYATVIMDAERTRVLWVGHGNSREAIRPFFELLGEHCQQIEAVAMDMNTAFDLEVKKHCPQAEVVYDLFHVVARYGR
DVIDRIRVDQANLLREDKPARKAVKQSRWLLLRNRDNLKDGQAVQLQELLAANQPLATVYVLKDALKDVWYAPSVREGWR
RWRTWLRHARESDLAPLQRFARNLRKYARGILASAHFHMHTSVLEGVNNRIKVIKRMAYGFRDSEYFFLKIKAAFPGKAR

Sequences:

>Translated_400_residues
MHPIDLASFWPGYDAVACRSSANNSLLIELEPQAGSVPKCGRCGQLSPLIHERRIRLVRDRDLFDQRVLLQLPVRRVDCL
NCGRVTERIDWLEPASRLTRRLQVWLESLLRLLPISHVSQLTGLHWHTLKTLDKRRLQAEVGTFYSSGVRRLVMDEFALH
KGHRYATVIMDAERTRVLWVGHGNSREAIRPFFELLGEHCQQIEAVAMDMNTAFDLEVKKHCPQAEVVYDLFHVVARYGR
DVIDRIRVDQANLLREDKPARKAVKQSRWLLLRNRDNLKDGQAVQLQELLAANQPLATVYVLKDALKDVWYAPSVREGWR
RWRTWLRHARESDLAPLQRFARNLRKYARGILASAHFHMHTSVLEGVNNRIKVIKRMAYGFRDSEYFFLKIKAAFPGKAR
>Mature_400_residues
MHPIDLASFWPGYDAVACRSSANNSLLIELEPQAGSVPKCGRCGQLSPLIHERRIRLVRDRDLFDQRVLLQLPVRRVDCL
NCGRVTERIDWLEPASRLTRRLQVWLESLLRLLPISHVSQLTGLHWHTLKTLDKRRLQAEVGTFYSSGVRRLVMDEFALH
KGHRYATVIMDAERTRVLWVGHGNSREAIRPFFELLGEHCQQIEAVAMDMNTAFDLEVKKHCPQAEVVYDLFHVVARYGR
DVIDRIRVDQANLLREDKPARKAVKQSRWLLLRNRDNLKDGQAVQLQELLAANQPLATVYVLKDALKDVWYAPSVREGWR
RWRTWLRHARESDLAPLQRFARNLRKYARGILASAHFHMHTSVLEGVNNRIKVIKRMAYGFRDSEYFFLKIKAAFPGKAR

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 46518; Mature: 46518

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPIDLASFWPGYDAVACRSSANNSLLIELEPQAGSVPKCGRCGQLSPLIHERRIRLVRD
CCCCCCHHCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RDLFDQRVLLQLPVRRVDCLNCGRVTERIDWLEPASRLTRRLQVWLESLLRLLPISHVSQ
HHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHH
LTGLHWHTLKTLDKRRLQAEVGTFYSSGVRRLVMDEFALHKGHRYATVIMDAERTRVLWV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEE
GHGNSREAIRPFFELLGEHCQQIEAVAMDMNTAFDLEVKKHCPQAEVVYDLFHVVARYGR
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHHHHHHHHHHHHHHCH
DVIDRIRVDQANLLREDKPARKAVKQSRWLLLRNRDNLKDGQAVQLQELLAANQPLATVY
HHHHHHCCCHHHHHHCCCHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHH
VLKDALKDVWYAPSVREGWRRWRTWLRHARESDLAPLQRFARNLRKYARGILASAHFHMH
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TSVLEGVNNRIKVIKRMAYGFRDSEYFFLKIKAAFPGKAR
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MHPIDLASFWPGYDAVACRSSANNSLLIELEPQAGSVPKCGRCGQLSPLIHERRIRLVRD
CCCCCCHHCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RDLFDQRVLLQLPVRRVDCLNCGRVTERIDWLEPASRLTRRLQVWLESLLRLLPISHVSQ
HHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHH
LTGLHWHTLKTLDKRRLQAEVGTFYSSGVRRLVMDEFALHKGHRYATVIMDAERTRVLWV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEE
GHGNSREAIRPFFELLGEHCQQIEAVAMDMNTAFDLEVKKHCPQAEVVYDLFHVVARYGR
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHHHHHHHHHHHHHHCH
DVIDRIRVDQANLLREDKPARKAVKQSRWLLLRNRDNLKDGQAVQLQELLAANQPLATVY
HHHHHHCCCHHHHHHCCCHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHH
VLKDALKDVWYAPSVREGWRRWRTWLRHARESDLAPLQRFARNLRKYARGILASAHFHMH
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TSVLEGVNNRIKVIKRMAYGFRDSEYFFLKIKAAFPGKAR
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]