Definition Pseudomonas stutzeri A1501, complete genome.
Accession NC_009434
Length 4,567,418

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The map label for this gene is yufP [H]

Identifier: 146283243

GI number: 146283243

Start: 3128719

End: 3129825

Strand: Direct

Name: yufP [H]

Synonym: PST_2908

Alternate gene names: 146283243

Gene position: 3128719-3129825 (Clockwise)

Preceding gene: 146283242

Following gene: 146283244

Centisome position: 68.5

GC content: 66.85

Gene sequence:

>1107_bases
ATGCTGTTATCTCTGCAACCCCGTGGCGAGGCTTCACGGGCCATGCTCTGGTGCTCCCCGCTGCTGGCCGCGCTGCTGAC
GCTGCTGAGCGGCGCGCTGCTGTTCGCCCTGCTCGGCCATCCACCGCTGGAAACCCTCAAGGTGCTGCTGGTCGACCCGC
TCGGCGATCTCTACGGCGTCTCCGAACTGTTGGTCAAGGCGTTGCCGATCCTGCTCTGCGCGCTGGGTCTGGCGGTGGTC
TACAACGCACGCATCTGGAACATCGGCGCCGAAGGCCAGCTGCTCATCGGTGCCCTGGCCGGTAGCGCGCTGGCCGTCAA
CATCATCGACTGGGACTCGCGCTGGGCGCTGGTGCTGACGCTGCTGCTCGGCACGCTCGGCGGCGCCGCCTGGGCCGGGC
TCTGCGCCTGGCTGAAGACGGCGTTCAACGCCAACGAAATCCTCACCAGCATCATGCTCAACTACATCGCGCTGAACCTG
CTGCTGTTCGCCGTGCACGGCCCGCTGAAAGACCCGGAAGGCTTCAACTTCCCCGAGTCCGCGATGTTCGGCGACGCCAC
CCGGCTGCCCGAGCTGATCGAAGGCCTGCGGGTGCATGGCGGTTTCTACTTCGCCCTGCTGGCGCTGGTGGTGGTCTGGG
TGCTGCTGCAGAAGAGCTTTCTCGGCTTCCAGATCAAGGTGCTCGGCCTGGACAGGCGCGCCGCCGGCTTTGTCGGCTTC
CGCGACAAGAAGCTGGTGTGGATCGCCCTGCTGATCAGCGGCGGCCTGGCCGGTCTGGCCGGTGTCGCCGAAGTCACCGG
GCCGATCGGCCAGCTGGTGCCGCAGGTCTCGCCGGGCTACGGCTATGCGGCGATCACCGTGGCCTTCCTCGGCCGTCTCA
ACCCCATCGGCATCGTCTTCGCCAGCCTGCTGATGGCGCTGCTCTACCTCGGCGGCGAGAACGCACAGATGGCGGCCAAC
CTGCCGCAGTCCATCACCCAGCTGTTCCAGGGCATGGTGCTGTTCTTCCTGCTCGCCTGCGACGTGCTGATCCTCTACCG
CCCGCGCCTGAAACTGTGGGCACGCAAGCCCCAGCTCGTCAGCGCCAAAGAGGAGCCGGCCACATGA

Upstream 100 bases:

>100_bases
CGCCAGCACCTGTCCGGTCGAAGTCGGCCGCTGGATGGCCGGCCAGTTCGACACCAGCGACGACCCCGTTTCCACCTCTG
CCGCCTGACGAGAACCCATC

Downstream 100 bases:

>100_bases
TCGTCCGCGCTGCGCTACTTCCCTTTTCACCCGCTGCCTGCCGCTTGAAGTTCGAGGCCTGACCGATGGACATGGATCTG
CTGACCAATATCTTCTACGC

Product: ABC transporter, permease protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MLLSLQPRGEASRAMLWCSPLLAALLTLLSGALLFALLGHPPLETLKVLLVDPLGDLYGVSELLVKALPILLCALGLAVV
YNARIWNIGAEGQLLIGALAGSALAVNIIDWDSRWALVLTLLLGTLGGAAWAGLCAWLKTAFNANEILTSIMLNYIALNL
LLFAVHGPLKDPEGFNFPESAMFGDATRLPELIEGLRVHGGFYFALLALVVVWVLLQKSFLGFQIKVLGLDRRAAGFVGF
RDKKLVWIALLISGGLAGLAGVAEVTGPIGQLVPQVSPGYGYAAITVAFLGRLNPIGIVFASLLMALLYLGGENAQMAAN
LPQSITQLFQGMVLFFLLACDVLILYRPRLKLWARKPQLVSAKEEPAT

Sequences:

>Translated_368_residues
MLLSLQPRGEASRAMLWCSPLLAALLTLLSGALLFALLGHPPLETLKVLLVDPLGDLYGVSELLVKALPILLCALGLAVV
YNARIWNIGAEGQLLIGALAGSALAVNIIDWDSRWALVLTLLLGTLGGAAWAGLCAWLKTAFNANEILTSIMLNYIALNL
LLFAVHGPLKDPEGFNFPESAMFGDATRLPELIEGLRVHGGFYFALLALVVVWVLLQKSFLGFQIKVLGLDRRAAGFVGF
RDKKLVWIALLISGGLAGLAGVAEVTGPIGQLVPQVSPGYGYAAITVAFLGRLNPIGIVFASLLMALLYLGGENAQMAAN
LPQSITQLFQGMVLFFLLACDVLILYRPRLKLWARKPQLVSAKEEPAT
>Mature_368_residues
MLLSLQPRGEASRAMLWCSPLLAALLTLLSGALLFALLGHPPLETLKVLLVDPLGDLYGVSELLVKALPILLCALGLAVV
YNARIWNIGAEGQLLIGALAGSALAVNIIDWDSRWALVLTLLLGTLGGAAWAGLCAWLKTAFNANEILTSIMLNYIALNL
LLFAVHGPLKDPEGFNFPESAMFGDATRLPELIEGLRVHGGFYFALLALVVVWVLLQKSFLGFQIKVLGLDRRAAGFVGF
RDKKLVWIALLISGGLAGLAGVAEVTGPIGQLVPQVSPGYGYAAITVAFLGRLNPIGIVFASLLMALLYLGGENAQMAAN
LPQSITQLFQGMVLFFLLACDVLILYRPRLKLWARKPQLVSAKEEPAT

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 39391; Mature: 39391

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSLQPRGEASRAMLWCSPLLAALLTLLSGALLFALLGHPPLETLKVLLVDPLGDLYGV
CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
SELLVKALPILLCALGLAVVYNARIWNIGAEGQLLIGALAGSALAVNIIDWDSRWALVLT
HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCEEEEEEEECCCHHHHHHH
LLLGTLGGAAWAGLCAWLKTAFNANEILTSIMLNYIALNLLLFAVHGPLKDPEGFNFPES
HHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
AMFGDATRLPELIEGLRVHGGFYFALLALVVVWVLLQKSFLGFQIKVLGLDRRAAGFVGF
HHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHCCCCCC
RDKKLVWIALLISGGLAGLAGVAEVTGPIGQLVPQVSPGYGYAAITVAFLGRLNPIGIVF
CCCHHHHHHHHHHCCHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHH
ASLLMALLYLGGENAQMAANLPQSITQLFQGMVLFFLLACDVLILYRPRLKLWARKPQLV
HHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
SAKEEPAT
CCCCCCCC
>Mature Secondary Structure
MLLSLQPRGEASRAMLWCSPLLAALLTLLSGALLFALLGHPPLETLKVLLVDPLGDLYGV
CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
SELLVKALPILLCALGLAVVYNARIWNIGAEGQLLIGALAGSALAVNIIDWDSRWALVLT
HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCEEEEEEEECCCHHHHHHH
LLLGTLGGAAWAGLCAWLKTAFNANEILTSIMLNYIALNLLLFAVHGPLKDPEGFNFPES
HHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
AMFGDATRLPELIEGLRVHGGFYFALLALVVVWVLLQKSFLGFQIKVLGLDRRAAGFVGF
HHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHCCCCCC
RDKKLVWIALLISGGLAGLAGVAEVTGPIGQLVPQVSPGYGYAAITVAFLGRLNPIGIVF
CCCHHHHHHHHHHCCHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHH
ASLLMALLYLGGENAQMAANLPQSITQLFQGMVLFFLLACDVLILYRPRLKLWARKPQLV
HHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
SAKEEPAT
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]