| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is yufP [H]
Identifier: 146283243
GI number: 146283243
Start: 3128719
End: 3129825
Strand: Direct
Name: yufP [H]
Synonym: PST_2908
Alternate gene names: 146283243
Gene position: 3128719-3129825 (Clockwise)
Preceding gene: 146283242
Following gene: 146283244
Centisome position: 68.5
GC content: 66.85
Gene sequence:
>1107_bases ATGCTGTTATCTCTGCAACCCCGTGGCGAGGCTTCACGGGCCATGCTCTGGTGCTCCCCGCTGCTGGCCGCGCTGCTGAC GCTGCTGAGCGGCGCGCTGCTGTTCGCCCTGCTCGGCCATCCACCGCTGGAAACCCTCAAGGTGCTGCTGGTCGACCCGC TCGGCGATCTCTACGGCGTCTCCGAACTGTTGGTCAAGGCGTTGCCGATCCTGCTCTGCGCGCTGGGTCTGGCGGTGGTC TACAACGCACGCATCTGGAACATCGGCGCCGAAGGCCAGCTGCTCATCGGTGCCCTGGCCGGTAGCGCGCTGGCCGTCAA CATCATCGACTGGGACTCGCGCTGGGCGCTGGTGCTGACGCTGCTGCTCGGCACGCTCGGCGGCGCCGCCTGGGCCGGGC TCTGCGCCTGGCTGAAGACGGCGTTCAACGCCAACGAAATCCTCACCAGCATCATGCTCAACTACATCGCGCTGAACCTG CTGCTGTTCGCCGTGCACGGCCCGCTGAAAGACCCGGAAGGCTTCAACTTCCCCGAGTCCGCGATGTTCGGCGACGCCAC CCGGCTGCCCGAGCTGATCGAAGGCCTGCGGGTGCATGGCGGTTTCTACTTCGCCCTGCTGGCGCTGGTGGTGGTCTGGG TGCTGCTGCAGAAGAGCTTTCTCGGCTTCCAGATCAAGGTGCTCGGCCTGGACAGGCGCGCCGCCGGCTTTGTCGGCTTC CGCGACAAGAAGCTGGTGTGGATCGCCCTGCTGATCAGCGGCGGCCTGGCCGGTCTGGCCGGTGTCGCCGAAGTCACCGG GCCGATCGGCCAGCTGGTGCCGCAGGTCTCGCCGGGCTACGGCTATGCGGCGATCACCGTGGCCTTCCTCGGCCGTCTCA ACCCCATCGGCATCGTCTTCGCCAGCCTGCTGATGGCGCTGCTCTACCTCGGCGGCGAGAACGCACAGATGGCGGCCAAC CTGCCGCAGTCCATCACCCAGCTGTTCCAGGGCATGGTGCTGTTCTTCCTGCTCGCCTGCGACGTGCTGATCCTCTACCG CCCGCGCCTGAAACTGTGGGCACGCAAGCCCCAGCTCGTCAGCGCCAAAGAGGAGCCGGCCACATGA
Upstream 100 bases:
>100_bases CGCCAGCACCTGTCCGGTCGAAGTCGGCCGCTGGATGGCCGGCCAGTTCGACACCAGCGACGACCCCGTTTCCACCTCTG CCGCCTGACGAGAACCCATC
Downstream 100 bases:
>100_bases TCGTCCGCGCTGCGCTACTTCCCTTTTCACCCGCTGCCTGCCGCTTGAAGTTCGAGGCCTGACCGATGGACATGGATCTG CTGACCAATATCTTCTACGC
Product: ABC transporter, permease protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MLLSLQPRGEASRAMLWCSPLLAALLTLLSGALLFALLGHPPLETLKVLLVDPLGDLYGVSELLVKALPILLCALGLAVV YNARIWNIGAEGQLLIGALAGSALAVNIIDWDSRWALVLTLLLGTLGGAAWAGLCAWLKTAFNANEILTSIMLNYIALNL LLFAVHGPLKDPEGFNFPESAMFGDATRLPELIEGLRVHGGFYFALLALVVVWVLLQKSFLGFQIKVLGLDRRAAGFVGF RDKKLVWIALLISGGLAGLAGVAEVTGPIGQLVPQVSPGYGYAAITVAFLGRLNPIGIVFASLLMALLYLGGENAQMAAN LPQSITQLFQGMVLFFLLACDVLILYRPRLKLWARKPQLVSAKEEPAT
Sequences:
>Translated_368_residues MLLSLQPRGEASRAMLWCSPLLAALLTLLSGALLFALLGHPPLETLKVLLVDPLGDLYGVSELLVKALPILLCALGLAVV YNARIWNIGAEGQLLIGALAGSALAVNIIDWDSRWALVLTLLLGTLGGAAWAGLCAWLKTAFNANEILTSIMLNYIALNL LLFAVHGPLKDPEGFNFPESAMFGDATRLPELIEGLRVHGGFYFALLALVVVWVLLQKSFLGFQIKVLGLDRRAAGFVGF RDKKLVWIALLISGGLAGLAGVAEVTGPIGQLVPQVSPGYGYAAITVAFLGRLNPIGIVFASLLMALLYLGGENAQMAAN LPQSITQLFQGMVLFFLLACDVLILYRPRLKLWARKPQLVSAKEEPAT >Mature_368_residues MLLSLQPRGEASRAMLWCSPLLAALLTLLSGALLFALLGHPPLETLKVLLVDPLGDLYGVSELLVKALPILLCALGLAVV YNARIWNIGAEGQLLIGALAGSALAVNIIDWDSRWALVLTLLLGTLGGAAWAGLCAWLKTAFNANEILTSIMLNYIALNL LLFAVHGPLKDPEGFNFPESAMFGDATRLPELIEGLRVHGGFYFALLALVVVWVLLQKSFLGFQIKVLGLDRRAAGFVGF RDKKLVWIALLISGGLAGLAGVAEVTGPIGQLVPQVSPGYGYAAITVAFLGRLNPIGIVFASLLMALLYLGGENAQMAAN LPQSITQLFQGMVLFFLLACDVLILYRPRLKLWARKPQLVSAKEEPAT
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4603
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR002229 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 39391; Mature: 39391
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSLQPRGEASRAMLWCSPLLAALLTLLSGALLFALLGHPPLETLKVLLVDPLGDLYGV CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH SELLVKALPILLCALGLAVVYNARIWNIGAEGQLLIGALAGSALAVNIIDWDSRWALVLT HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCEEEEEEEECCCHHHHHHH LLLGTLGGAAWAGLCAWLKTAFNANEILTSIMLNYIALNLLLFAVHGPLKDPEGFNFPES HHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH AMFGDATRLPELIEGLRVHGGFYFALLALVVVWVLLQKSFLGFQIKVLGLDRRAAGFVGF HHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHCCCCCC RDKKLVWIALLISGGLAGLAGVAEVTGPIGQLVPQVSPGYGYAAITVAFLGRLNPIGIVF CCCHHHHHHHHHHCCHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHH ASLLMALLYLGGENAQMAANLPQSITQLFQGMVLFFLLACDVLILYRPRLKLWARKPQLV HHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC SAKEEPAT CCCCCCCC >Mature Secondary Structure MLLSLQPRGEASRAMLWCSPLLAALLTLLSGALLFALLGHPPLETLKVLLVDPLGDLYGV CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH SELLVKALPILLCALGLAVVYNARIWNIGAEGQLLIGALAGSALAVNIIDWDSRWALVLT HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCEEEEEEEECCCHHHHHHH LLLGTLGGAAWAGLCAWLKTAFNANEILTSIMLNYIALNLLLFAVHGPLKDPEGFNFPES HHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH AMFGDATRLPELIEGLRVHGGFYFALLALVVVWVLLQKSFLGFQIKVLGLDRRAAGFVGF HHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHCCCCCC RDKKLVWIALLISGGLAGLAGVAEVTGPIGQLVPQVSPGYGYAAITVAFLGRLNPIGIVF CCCHHHHHHHHHHCCHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHH ASLLMALLYLGGENAQMAANLPQSITQLFQGMVLFFLLACDVLILYRPRLKLWARKPQLV HHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC SAKEEPAT CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]