| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146283239
Identifier: 146283239
GI number: 146283239
Start: 3125378
End: 3125833
Strand: Direct
Name: 146283239
Synonym: PST_2904
Alternate gene names: NA
Gene position: 3125378-3125833 (Clockwise)
Preceding gene: 146283238
Following gene: 146283242
Centisome position: 68.43
GC content: 69.74
Gene sequence:
>456_bases ATGAGCCTTCATACCAGCAACACCCTGGCCGCGGCATACCTGGCCGTGTTCGGCTCGCTTACCCTCGCCTCGCTGGACGC CGCCGGCAACGAGCGCCACGAGCGTGGCATGGCGGTCATCGAGCACCTGTCCGGCGGTGCCGGGCAACCGGTGCTCGAGG CGCTGCGCGAGGACTATCCGTTTCTCGCCGAGGGCATCACCGGCTATGCGCTGGGCGATGTCTGGGGACGCAGCGAGCTG GATGACCGCACCCGCCAGCTGGCCGCGGTCGCCGCCTTCGCCGCCCAGGGCAATCTGCCCTACATGAAGATCCACGCCGG CTACGCGCTGCGCCTGGGCGTCAGCCGTGAGGAGCTGAAGGAGGTGGTCTACCTGACCACCGTGACGGCCGGCTTTCCCC GCGCCATCGATGCCGCCCAGGCATTGCGCGAGGTGCCAGACCCGGCGTCGCGCTGA
Upstream 100 bases:
>100_bases ATCGCCCGCGCCATCGCCTATGCCATCGACCAGCCGGCCGATGTCGACGTCAGCGAGCTGGTGGTGCGTCCCACCGCCAG CCCCTACTGAGGACGCCGCC
Downstream 100 bases:
>100_bases GTATCAGAGCCTTTTCACGATCTCGCGAGCTAGAGTCCTGCAAGGCAAAAACAGGCGAGGACGCGGAGTTTACTGATGTA AATGAGCATCCGAGCCTGTT
Product: gamma-carboxymuconolactone decarboxylase
Products: NA
Alternate protein names: 4-Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Family Protein; Gamma-Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Protein; Carboxymuconolactone Decarboxylase Family; Decarboxylase
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSLHTSNTLAAAYLAVFGSLTLASLDAAGNERHERGMAVIEHLSGGAGQPVLEALREDYPFLAEGITGYALGDVWGRSEL DDRTRQLAAVAAFAAQGNLPYMKIHAGYALRLGVSREELKEVVYLTTVTAGFPRAIDAAQALREVPDPASR
Sequences:
>Translated_151_residues MSLHTSNTLAAAYLAVFGSLTLASLDAAGNERHERGMAVIEHLSGGAGQPVLEALREDYPFLAEGITGYALGDVWGRSEL DDRTRQLAAVAAFAAQGNLPYMKIHAGYALRLGVSREELKEVVYLTTVTAGFPRAIDAAQALREVPDPASR >Mature_150_residues SLHTSNTLAAAYLAVFGSLTLASLDAAGNERHERGMAVIEHLSGGAGQPVLEALREDYPFLAEGITGYALGDVWGRSELD DRTRQLAAVAAFAAQGNLPYMKIHAGYALRLGVSREELKEVVYLTTVTAGFPRAIDAAQALREVPDPASR
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16098; Mature: 15967
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHTSNTLAAAYLAVFGSLTLASLDAAGNERHERGMAVIEHLSGGAGQPVLEALREDYP CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC FLAEGITGYALGDVWGRSELDDRTRQLAAVAAFAAQGNLPYMKIHAGYALRLGVSREELK HHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCHHHHH EVVYLTTVTAGFPRAIDAAQALREVPDPASR HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SLHTSNTLAAAYLAVFGSLTLASLDAAGNERHERGMAVIEHLSGGAGQPVLEALREDYP CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC FLAEGITGYALGDVWGRSELDDRTRQLAAVAAFAAQGNLPYMKIHAGYALRLGVSREELK HHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCHHHHH EVVYLTTVTAGFPRAIDAAQALREVPDPASR HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA