| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
Click here to switch to the map view.
The map label for this gene is zraS [C]
Identifier: 146283217
GI number: 146283217
Start: 3100582
End: 3102669
Strand: Direct
Name: zraS [C]
Synonym: PST_2882
Alternate gene names: 146283217
Gene position: 3100582-3102669 (Clockwise)
Preceding gene: 146283206
Following gene: 146283220
Centisome position: 67.88
GC content: 67.19
Gene sequence:
>2088_bases ATGGCAGGCGAAACTGCGGAAGCAAAGCGAATCGTTCTCGGCATGCGCGACAGCGACAAACGGCGCGAGCTCTCCGCGCT GCTGGCCGCCGAGGGCTACAGCGTCGGCCTTTGCACTGACCAGACGAGCCTGGCACAGCGCATCGACGAGACGGTCGACG TCGTGTTGCTCGCCGACGAGCTGGCGGCGGGGCCGTTGGATAACCTCAGCGCCGCGCTCGGGCAACTGCCGGCCGGCGGA GCCATTCCGTTCATCCTGCTGGACTCCGGCACCGAGCCCCATGCTGTGCTCCGTGCCCGCCTGCCGTCGGCGATCAGCGA CTTCGTGGTACTCGAAGAACCGGTCGGGCCCGCCACGCTGCTCAGCTGCCTCGCCACCTGCATACAGCTGCATCGGGAGC GGCTCGCCCGGCAGCGACAGAAGTCCGCACAAGTCGATGAGCGAGCCCGCTTCGAGCGACTGATCGAGAACCTTCCAGTC GGGGTCTGCTTCATCGATACCGACGGCAATACGCTGCTCAGCAACCCCAAGTACGACGAGTACGTGCCGAACCGGAAGAT ACCTTCGGCGGCGCCCGACCGGGCCCGGCGCTGGGTAGGCCTGGACAGCCAGGGGCAGGTCATACCGCCGAGCCAGTACG TCGGTGCCCGTGCCCTGCGCGGCGAGCAGGTAAATGACCAGGACTACCGGTACTACCCCGAAAACGGCGGCGAACGCTGG CTGCGCCTGAGCGGCGTGCCCCTCTATGACAACACCGAGCAGCCGATGGGCGCGGCGGTAGTGATCATCGACGTCGATGC CGAGAGGCGCAGCGAGGAGATGCTGCGCGAGTTCAATCAGCAGCTCGAGCAGGAGGTCGAGCTGCGAACCCAGGCACTGC AGCAGGCGCTCGACCAACTGACCGTCGAAGTCCAGGAGCGCAGCCGAGCAGAGGAACAACTGCGCCACTCTCAGAAGATG GACGCCGTCGGCCAGCTTACCGGCGGCATCGCACACGACTTCAACAACATGCTGACTGGCATCATCGGTGCGCTGGATCT GATTCGCCTGCGCCTGGATACCGGTCGCCATGACGACCTGCCGCGGTATCTCGACGCGGCACATGGCTCGGCGCAGCGCG CCGCCTCCCTGACCCAGCGCCTGCTGGCCTTCTCCCGCCGCCAGCCTTTGCAGACCCGGCCGACCGCGGTCAATCCGCTG ATCCGCTCGCTTGCCGAGCTGTTGCAGCGCAGCCTGGGCGAAACCATCCGCTTCGAGCTGGCCATCGACGAGGCCGCCGG GCTCGCCCTGGTCGACCCCAGCCAGATGGAAAACGCCCTGCTCAACCTGACGTTCAACGCCCGGGATGCCATGCCGGACG GCGGCACATTGCGCATCGAGACGCAGCACCTGGAATTGCCAGCGGAGCAGGCCTCCCGCCACGGCGTGCAGACCGGCGAA TACCTGTGCGTGCGCGTCATCGACACCGGCATTGGCATTCCAGCGCCCCTGGTGGACAAGGTGTTCGAGCCTTTCTTCAC GACCAAGCCCCTCGGCGAAGGTACCGGGCTCGGCTTGTCGATGGTCTACGGCTTCGTCCGCCAGAGCGGCGGCTTCATCA CCATCGACAGCTGCCAGGGCAAGGGGACCCGCGTCGCCCTGCACATGCCAGCGGCGCCTGCCGACGCGCGGGAAGAATCG GCCGCGGCAACGAGCCGCGTTCCCGGTGCAGGGGGCGGGCGCACGGTACTGTTGGTCGAGGACGACGATACCGTGCGGCC GCTGCTGCAGAGCGCGCTCGAGGATTTCGGCTACCGTGTGCACCTGGCCGCCGACAGTCAGAGCGCCCTGGAAGTCGCCG CACAGCTCGATTCGCTCGACCTGCTGCTGACCGATGTCGGCCTGCCGGGGCTCAACGGCCGCCAGCTCGCCGAAATGCTT CAGCAACGGCGCCCTGGCCTGCCGGTGGTGCTGATCACCGGCTACGCCGAACAGGCCGCGACCCGCCTCGACTGCCTGGC CCCCGGCATGCAACTCATGACCAAACCCTTCTCGCTCGAACTGCTGGCCGAAACCGTAGCCCGCGCAATCACCACCCCGG TTGGCTGA
Upstream 100 bases:
>100_bases CCTGCTTTCGCACTGCCCGACACCGGCAGCCGCGTCGAGCCATGTCCGATCGATCGGGAGCCCTGATCGGACCACCAACC AGACAAGGCGCACGTTACAG
Downstream 100 bases:
>100_bases GAGGCCCTACCACGGCAGCACTTCTGCGCTGTACGCATGGAACCCGCCACTCGCCTCGGGCCCCAGGCTGTCGATGACCC TGAGCAGATCCCGCGCGGCA
Product: sensory box histidine kinase/response regulator
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 695; Mature: 694
Protein sequence:
>695_residues MAGETAEAKRIVLGMRDSDKRRELSALLAAEGYSVGLCTDQTSLAQRIDETVDVVLLADELAAGPLDNLSAALGQLPAGG AIPFILLDSGTEPHAVLRARLPSAISDFVVLEEPVGPATLLSCLATCIQLHRERLARQRQKSAQVDERARFERLIENLPV GVCFIDTDGNTLLSNPKYDEYVPNRKIPSAAPDRARRWVGLDSQGQVIPPSQYVGARALRGEQVNDQDYRYYPENGGERW LRLSGVPLYDNTEQPMGAAVVIIDVDAERRSEEMLREFNQQLEQEVELRTQALQQALDQLTVEVQERSRAEEQLRHSQKM DAVGQLTGGIAHDFNNMLTGIIGALDLIRLRLDTGRHDDLPRYLDAAHGSAQRAASLTQRLLAFSRRQPLQTRPTAVNPL IRSLAELLQRSLGETIRFELAIDEAAGLALVDPSQMENALLNLTFNARDAMPDGGTLRIETQHLELPAEQASRHGVQTGE YLCVRVIDTGIGIPAPLVDKVFEPFFTTKPLGEGTGLGLSMVYGFVRQSGGFITIDSCQGKGTRVALHMPAAPADAREES AAATSRVPGAGGGRTVLLVEDDDTVRPLLQSALEDFGYRVHLAADSQSALEVAAQLDSLDLLLTDVGLPGLNGRQLAEML QQRRPGLPVVLITGYAEQAATRLDCLAPGMQLMTKPFSLELLAETVARAITTPVG
Sequences:
>Translated_695_residues MAGETAEAKRIVLGMRDSDKRRELSALLAAEGYSVGLCTDQTSLAQRIDETVDVVLLADELAAGPLDNLSAALGQLPAGG AIPFILLDSGTEPHAVLRARLPSAISDFVVLEEPVGPATLLSCLATCIQLHRERLARQRQKSAQVDERARFERLIENLPV GVCFIDTDGNTLLSNPKYDEYVPNRKIPSAAPDRARRWVGLDSQGQVIPPSQYVGARALRGEQVNDQDYRYYPENGGERW LRLSGVPLYDNTEQPMGAAVVIIDVDAERRSEEMLREFNQQLEQEVELRTQALQQALDQLTVEVQERSRAEEQLRHSQKM DAVGQLTGGIAHDFNNMLTGIIGALDLIRLRLDTGRHDDLPRYLDAAHGSAQRAASLTQRLLAFSRRQPLQTRPTAVNPL IRSLAELLQRSLGETIRFELAIDEAAGLALVDPSQMENALLNLTFNARDAMPDGGTLRIETQHLELPAEQASRHGVQTGE YLCVRVIDTGIGIPAPLVDKVFEPFFTTKPLGEGTGLGLSMVYGFVRQSGGFITIDSCQGKGTRVALHMPAAPADAREES AAATSRVPGAGGGRTVLLVEDDDTVRPLLQSALEDFGYRVHLAADSQSALEVAAQLDSLDLLLTDVGLPGLNGRQLAEML QQRRPGLPVVLITGYAEQAATRLDCLAPGMQLMTKPFSLELLAETVARAITTPVG >Mature_694_residues AGETAEAKRIVLGMRDSDKRRELSALLAAEGYSVGLCTDQTSLAQRIDETVDVVLLADELAAGPLDNLSAALGQLPAGGA IPFILLDSGTEPHAVLRARLPSAISDFVVLEEPVGPATLLSCLATCIQLHRERLARQRQKSAQVDERARFERLIENLPVG VCFIDTDGNTLLSNPKYDEYVPNRKIPSAAPDRARRWVGLDSQGQVIPPSQYVGARALRGEQVNDQDYRYYPENGGERWL RLSGVPLYDNTEQPMGAAVVIIDVDAERRSEEMLREFNQQLEQEVELRTQALQQALDQLTVEVQERSRAEEQLRHSQKMD AVGQLTGGIAHDFNNMLTGIIGALDLIRLRLDTGRHDDLPRYLDAAHGSAQRAASLTQRLLAFSRRQPLQTRPTAVNPLI RSLAELLQRSLGETIRFELAIDEAAGLALVDPSQMENALLNLTFNARDAMPDGGTLRIETQHLELPAEQASRHGVQTGEY LCVRVIDTGIGIPAPLVDKVFEPFFTTKPLGEGTGLGLSMVYGFVRQSGGFITIDSCQGKGTRVALHMPAAPADAREESA AATSRVPGAGGGRTVLLVEDDDTVRPLLQSALEDFGYRVHLAADSQSALEVAAQLDSLDLLLTDVGLPGLNGRQLAEMLQ QRRPGLPVVLITGYAEQAATRLDCLAPGMQLMTKPFSLELLAETVARAITTPVG
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=248, Percent_Identity=27.8225806451613, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI48994928, Length=409, Percent_Identity=26.161369193154, Blast_Score=92, Evalue=2e-19, Organism=Escherichia coli, GI1788549, Length=249, Percent_Identity=28.9156626506024, Blast_Score=90, Evalue=5e-19, Organism=Escherichia coli, GI145693157, Length=509, Percent_Identity=24.3614931237721, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI87081816, Length=450, Percent_Identity=25.3333333333333, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1790300, Length=248, Percent_Identity=30.6451612903226, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1788713, Length=266, Percent_Identity=26.3157894736842, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 75563; Mature: 75432
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGETAEAKRIVLGMRDSDKRRELSALLAAEGYSVGLCTDQTSLAQRIDETVDVVLLADE CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHEEEEEEHH LAAGPLDNLSAALGQLPAGGAIPFILLDSGTEPHAVLRARLPSAISDFVVLEEPVGPATL HCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHH LSCLATCIQLHRERLARQRQKSAQVDERARFERLIENLPVGVCFIDTDGNTLLSNPKYDE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCHH YVPNRKIPSAAPDRARRWVGLDSQGQVIPPSQYVGARALRGEQVNDQDYRYYPENGGERW CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHCHHHHCCCCCCCCCCEECCCCCCCCE LRLSGVPLYDNTEQPMGAAVVIIDVDAERRSEEMLREFNQQLEQEVELRTQALQQALDQL EEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVEVQERSRAEEQLRHSQKMDAVGQLTGGIAHDFNNMLTGIIGALDLIRLRLDTGRHDDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PRYLDAAHGSAQRAASLTQRLLAFSRRQPLQTRPTAVNPLIRSLAELLQRSLGETIRFEL HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE AIDEAAGLALVDPSQMENALLNLTFNARDAMPDGGTLRIETQHLELPAEQASRHGVQTGE EEECCCCEEEECHHHHCCCCEEEEECCCCCCCCCCEEEEEEHHCCCCHHHHHHCCCCCCC YLCVRVIDTGIGIPAPLVDKVFEPFFTTKPLGEGTGLGLSMVYGFVRQSGGFITIDSCQG EEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCC KGTRVALHMPAAPADAREESAAATSRVPGAGGGRTVLLVEDDDTVRPLLQSALEDFGYRV CCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEE HLAADSQSALEVAAQLDSLDLLLTDVGLPGLNGRQLAEMLQQRRPGLPVVLITGYAEQAA EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHH TRLDCLAPGMQLMTKPFSLELLAETVARAITTPVG HHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AGETAEAKRIVLGMRDSDKRRELSALLAAEGYSVGLCTDQTSLAQRIDETVDVVLLADE CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHEEEEEEHH LAAGPLDNLSAALGQLPAGGAIPFILLDSGTEPHAVLRARLPSAISDFVVLEEPVGPATL HCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHH LSCLATCIQLHRERLARQRQKSAQVDERARFERLIENLPVGVCFIDTDGNTLLSNPKYDE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCHH YVPNRKIPSAAPDRARRWVGLDSQGQVIPPSQYVGARALRGEQVNDQDYRYYPENGGERW CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHCHHHHCCCCCCCCCCEECCCCCCCCE LRLSGVPLYDNTEQPMGAAVVIIDVDAERRSEEMLREFNQQLEQEVELRTQALQQALDQL EEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVEVQERSRAEEQLRHSQKMDAVGQLTGGIAHDFNNMLTGIIGALDLIRLRLDTGRHDDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PRYLDAAHGSAQRAASLTQRLLAFSRRQPLQTRPTAVNPLIRSLAELLQRSLGETIRFEL HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE AIDEAAGLALVDPSQMENALLNLTFNARDAMPDGGTLRIETQHLELPAEQASRHGVQTGE EEECCCCEEEECHHHHCCCCEEEEECCCCCCCCCCEEEEEEHHCCCCHHHHHHCCCCCCC YLCVRVIDTGIGIPAPLVDKVFEPFFTTKPLGEGTGLGLSMVYGFVRQSGGFITIDSCQG EEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCC KGTRVALHMPAAPADAREESAAATSRVPGAGGGRTVLLVEDDDTVRPLLQSALEDFGYRV CCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEE HLAADSQSALEVAAQLDSLDLLLTDVGLPGLNGRQLAEMLQQRRPGLPVVLITGYAEQAA EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHH TRLDCLAPGMQLMTKPFSLELLAETVARAITTPVG HHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA