| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is csgB [H]
Identifier: 146283195
GI number: 146283195
Start: 3076360
End: 3076893
Strand: Direct
Name: csgB [H]
Synonym: PST_2860
Alternate gene names: 146283195
Gene position: 3076360-3076893 (Clockwise)
Preceding gene: 146283194
Following gene: 146283196
Centisome position: 67.35
GC content: 64.61
Gene sequence:
>534_bases ATGTCGGTATCTGAGCTCGATCAGGACAGGACGCCCATGAAACGCTCGCAACGGATTGCGCATGACCTGCTGTTGCCCAT GATTCTCCTGCTGGCCGCTTACGGCCATGCCGAGGTCGCCATTCCGGGCGATCTGGCCCCGAATGAACTCGTTCCTTCCG CCATTCACTCATCCGTTTTCGGTCAGGCCGCCAGCGGCGCGCAGGGTGCGCTCGCGGTCGTTCAGCAGGCCGGCCAAGGC ATGACCGGACGCATCGCCCAGAGCGGCGCGGAGCTGGAGGCCTACATCTTTCAGAACGGCTACGCCAACAGCGCCTCGAT CGAACAGATCGGCCAGGGCAACGCGGCGCTGATCAGCCAGGACGGCTTCGGCAACGAGGCCCAGATCGAACAGACCGGCG CGGACAACCGTGCCGCCATCGCACAGCAGGGCTCGAGCAATCGCGCCCTCATCGAACAGACCGGCAGCGGGCACAGCAGC AATGTCAGCCAGAGCGGCCGCGGTCTGACGGTAGTGGTTCGCCAGTACCGCTAA
Upstream 100 bases:
>100_bases ACCGCGGTGTTTTTCGCGTCCACGTAAACACCTCTTGCGCACCAACAGACAACACTTTCAATCGTTGGATGGATGTTTTC TGCACTGAATCGAGGCAAAC
Downstream 100 bases:
>100_bases TCCCAGGGAAATACCGCTGTACTTAAAACATCCATGGAGTGACAAAAATGTTTAAGTTCAAACCTCTTGTAGCAGCCATC CTGACTGTCGCCACTGCCCA
Product: curli fiber surface-exposed nucleator CsgB, putative
Products: NA
Alternate protein names: Fimbrin SEF17 minor subunit [H]
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSVSELDQDRTPMKRSQRIAHDLLLPMILLLAAYGHAEVAIPGDLAPNELVPSAIHSSVFGQAASGAQGALAVVQQAGQG MTGRIAQSGAELEAYIFQNGYANSASIEQIGQGNAALISQDGFGNEAQIEQTGADNRAAIAQQGSSNRALIEQTGSGHSS NVSQSGRGLTVVVRQYR
Sequences:
>Translated_177_residues MSVSELDQDRTPMKRSQRIAHDLLLPMILLLAAYGHAEVAIPGDLAPNELVPSAIHSSVFGQAASGAQGALAVVQQAGQG MTGRIAQSGAELEAYIFQNGYANSASIEQIGQGNAALISQDGFGNEAQIEQTGADNRAAIAQQGSSNRALIEQTGSGHSS NVSQSGRGLTVVVRQYR >Mature_176_residues SVSELDQDRTPMKRSQRIAHDLLLPMILLLAAYGHAEVAIPGDLAPNELVPSAIHSSVFGQAASGAQGALAVVQQAGQGM TGRIAQSGAELEAYIFQNGYANSASIEQIGQGNAALISQDGFGNEAQIEQTGADNRAAIAQQGSSNRALIEQTGSGHSSN VSQSGRGLTVVVRQYR
Specific function: Curlin is the structural subunit of the curli. Curli are coiled surface structures that assemble preferentially at growth temperatures below 37 degrees Celsius. Curli can bind to fibronectin. The minor subunit is the nucleation component of curlin monomer
COG id: NA
COG function: NA
Gene ontology:
Cell location: Fimbrium. Note=Part of the curli surface structure [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CsgA/CsgB family [H]
Homologues:
Organism=Escherichia coli, GI1787278, Length=154, Percent_Identity=33.7662337662338, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009742 [H]
Pfam domain/function: PF07012 Curlin_rpt [H]
EC number: NA
Molecular weight: Translated: 18401; Mature: 18269
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSELDQDRTPMKRSQRIAHDLLLPMILLLAAYGHAEVAIPGDLAPNELVPSAIHSSVF CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH GQAASGAQGALAVVQQAGQGMTGRIAQSGAELEAYIFQNGYANSASIEQIGQGNAALISQ CCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCEEEEEEECCCCCCCCHHHHCCCCEEEEEC DGFGNEAQIEQTGADNRAAIAQQGSSNRALIEQTGSGHSSNVSQSGRGLTVVVRQYR CCCCCCCEEHHCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure SVSELDQDRTPMKRSQRIAHDLLLPMILLLAAYGHAEVAIPGDLAPNELVPSAIHSSVF CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH GQAASGAQGALAVVQQAGQGMTGRIAQSGAELEAYIFQNGYANSASIEQIGQGNAALISQ CCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCEEEEEEECCCCCCCCHHHHCCCCEEEEEC DGFGNEAQIEQTGADNRAAIAQQGSSNRALIEQTGSGHSSNVSQSGRGLTVVVRQYR CCCCCCCEEHHCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550497 [H]