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The map label for this gene is rdgC [H]

Identifier: 146283110

GI number: 146283110

Start: 2996389

End: 2997345

Strand: Direct

Name: rdgC [H]

Synonym: PST_2773

Alternate gene names: 146283110

Gene position: 2996389-2997345 (Clockwise)

Preceding gene: 146283108

Following gene: 146283115

Centisome position: 65.6

GC content: 62.49

Gene sequence:

>957_bases
ATGCGCTCCTTTGTTTCCCCGGAGATCTACCCCGCCATGTGGTTTCGCAATCTGCTCGTATACCGTCTCACCCAGAACGT
CGCTCTAGATGCCGAGACTCTCGAAGCTGCACTGGCCGCCAAACCCGCCCGCCCCTGCGCCAGCCAGGAGCTGAGCACCT
ATGGTTTCGTCGCGCCGTTCGGCAAGGGTGAAGACGCCCCGCTGGTGCACGCCAGCCAGGGCTTTCTGCTGATCGCCACA
CGCAAGGAAGAACGTATCCTGCCCGGTAGCGTGGTCAAGGATGCAGTGAAGGAGAAGGTCGACGAAATCGAGGCCGAGCA
GATGCGCAAGGTCTACAAGAAGGAGCGCGACCAGATCAAGGACGAGATCATCCAGGCCTTCCTTCCGCGTGCCTTCATCC
GCAAGTCCGGCACCTTCGCCGCGATCGATGCCGAGCGCGGTCTGATCCTGGTCAACTCGGCCAGTCCGAAGAAGGCCGAA
GACCTGCTGTCCACCCTGCGTGAAGCGATCGGCTCGCTGCCGGTGCGCCCGCTGACGGTGAAGATCGCGCCCAGCGCCAC
GCTTACCGACTGGGTGAAGACTCAGAAGGCGGCGGACGACTTCTTCGTGCTGGACGAATGCGAACTGCGTGACACCCACG
AAGACGGCGGTGTGGTGCGCTGCAAGCGTCAGGACCTGACCAGCGACGAGATCCAGCAGCATATGGAAGCCGGCAAGCAG
GTCACCCAGCTGTCCCTGGCATGGCAGGACAAGCTGTCCTTCGTACTGGACGACAAGCTGATCATCAAGCGCCTGCGCTT
CGAAGAACTGCTGCAGGACCAGGCCGAACAGGACGGTGGCGACGACGCGCTCGCCCAGCAGGACGCCAGTTTCCTGCTGA
TGATGATGACCTTCCGCGAGTTCCTGCCGGCGCTGTTCGAGGCCTTCGGCGGCGAAGAGGTTCCGCAGGGTATCTGA

Upstream 100 bases:

>100_bases
TTCCAAGGACTTAGGAAAACCCTGGTTTGCCAGCCATTTTATCCGGCCCGCTGCGCATTAACTTGCTTCAGGGTTGGCCT
CAGCCAGCCAGGCAGGAATA

Downstream 100 bases:

>100_bases
CCGCACGGGGCGCCGCGCGGCGCCCCTCCCCCCTTCCGCCTCAGCGCAGGCCGATCTGCGTCAGCAGGATCCCGCCCAGC
CGCTGGCCCAGCGCCCAGAG

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MRSFVSPEIYPAMWFRNLLVYRLTQNVALDAETLEAALAAKPARPCASQELSTYGFVAPFGKGEDAPLVHASQGFLLIAT
RKEERILPGSVVKDAVKEKVDEIEAEQMRKVYKKERDQIKDEIIQAFLPRAFIRKSGTFAAIDAERGLILVNSASPKKAE
DLLSTLREAIGSLPVRPLTVKIAPSATLTDWVKTQKAADDFFVLDECELRDTHEDGGVVRCKRQDLTSDEIQQHMEAGKQ
VTQLSLAWQDKLSFVLDDKLIIKRLRFEELLQDQAEQDGGDDALAQQDASFLLMMMTFREFLPALFEAFGGEEVPQGI

Sequences:

>Translated_318_residues
MRSFVSPEIYPAMWFRNLLVYRLTQNVALDAETLEAALAAKPARPCASQELSTYGFVAPFGKGEDAPLVHASQGFLLIAT
RKEERILPGSVVKDAVKEKVDEIEAEQMRKVYKKERDQIKDEIIQAFLPRAFIRKSGTFAAIDAERGLILVNSASPKKAE
DLLSTLREAIGSLPVRPLTVKIAPSATLTDWVKTQKAADDFFVLDECELRDTHEDGGVVRCKRQDLTSDEIQQHMEAGKQ
VTQLSLAWQDKLSFVLDDKLIIKRLRFEELLQDQAEQDGGDDALAQQDASFLLMMMTFREFLPALFEAFGGEEVPQGI
>Mature_318_residues
MRSFVSPEIYPAMWFRNLLVYRLTQNVALDAETLEAALAAKPARPCASQELSTYGFVAPFGKGEDAPLVHASQGFLLIAT
RKEERILPGSVVKDAVKEKVDEIEAEQMRKVYKKERDQIKDEIIQAFLPRAFIRKSGTFAAIDAERGLILVNSASPKKAE
DLLSTLREAIGSLPVRPLTVKIAPSATLTDWVKTQKAADDFFVLDECELRDTHEDGGVVRCKRQDLTSDEIQQHMEAGKQ
VTQLSLAWQDKLSFVLDDKLIIKRLRFEELLQDQAEQDGGDDALAQQDASFLLMMMTFREFLPALFEAFGGEEVPQGI

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=300, Percent_Identity=47.3333333333333, Blast_Score=278, Evalue=2e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 35620; Mature: 35620

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFVSPEIYPAMWFRNLLVYRLTQNVALDAETLEAALAAKPARPCASQELSTYGFVAPF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCC
GKGEDAPLVHASQGFLLIATRKEERILPGSVVKDAVKEKVDEIEAEQMRKVYKKERDQIK
CCCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEIIQAFLPRAFIRKSGTFAAIDAERGLILVNSASPKKAEDLLSTLREAIGSLPVRPLTV
HHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEE
KIAPSATLTDWVKTQKAADDFFVLDECELRDTHEDGGVVRCKRQDLTSDEIQQHMEAGKQ
EECCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
VTQLSLAWQDKLSFVLDDKLIIKRLRFEELLQDQAEQDGGDDALAQQDASFLLMMMTFRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FLPALFEAFGGEEVPQGI
HHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRSFVSPEIYPAMWFRNLLVYRLTQNVALDAETLEAALAAKPARPCASQELSTYGFVAPF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCC
GKGEDAPLVHASQGFLLIATRKEERILPGSVVKDAVKEKVDEIEAEQMRKVYKKERDQIK
CCCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEIIQAFLPRAFIRKSGTFAAIDAERGLILVNSASPKKAEDLLSTLREAIGSLPVRPLTV
HHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEE
KIAPSATLTDWVKTQKAADDFFVLDECELRDTHEDGGVVRCKRQDLTSDEIQQHMEAGKQ
EECCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
VTQLSLAWQDKLSFVLDDKLIIKRLRFEELLQDQAEQDGGDDALAQQDASFLLMMMTFRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FLPALFEAFGGEEVPQGI
HHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA